Coexpression cluster: Cluster_4714 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016441 post-transcriptional gene silencing 66.67% (4/6) 9.71 0.0 0.0
GO:0035194 regulatory ncRNA-mediated post-transcriptional gene silencing 66.67% (4/6) 9.71 0.0 0.0
GO:0031047 regulatory ncRNA-mediated gene silencing 66.67% (4/6) 8.81 0.0 0.0
GO:0010608 post-transcriptional regulation of gene expression 66.67% (4/6) 7.83 0.0 0.0
GO:0004521 RNA endonuclease activity 66.67% (4/6) 7.9 0.0 0.0
GO:0004540 RNA nuclease activity 66.67% (4/6) 7.51 0.0 0.0
GO:0004519 endonuclease activity 66.67% (4/6) 7.52 0.0 0.0
GO:0010629 negative regulation of gene expression 66.67% (4/6) 7.34 0.0 0.0
GO:0009890 negative regulation of biosynthetic process 66.67% (4/6) 6.93 0.0 0.0
GO:0004518 nuclease activity 66.67% (4/6) 6.9 0.0 0.0
GO:0010558 negative regulation of macromolecule biosynthetic process 66.67% (4/6) 6.98 0.0 0.0
GO:0031327 negative regulation of cellular biosynthetic process 66.67% (4/6) 6.94 0.0 0.0
GO:0009892 negative regulation of metabolic process 66.67% (4/6) 6.77 0.0 0.0
GO:0031324 negative regulation of cellular metabolic process 66.67% (4/6) 6.78 0.0 0.0
GO:0010605 negative regulation of macromolecule metabolic process 66.67% (4/6) 6.8 0.0 0.0
GO:0048523 negative regulation of cellular process 66.67% (4/6) 6.4 0.0 0.0
GO:0048519 negative regulation of biological process 66.67% (4/6) 6.38 0.0 0.0
GO:0140098 catalytic activity, acting on RNA 66.67% (4/6) 5.84 0.0 1e-06
GO:0016788 hydrolase activity, acting on ester bonds 66.67% (4/6) 5.19 2e-06 4e-06
GO:0140640 catalytic activity, acting on a nucleic acid 66.67% (4/6) 5.05 2e-06 5e-06
GO:0003723 RNA binding 66.67% (4/6) 4.92 3e-06 7e-06
GO:0003676 nucleic acid binding 83.33% (5/6) 3.66 7e-06 1.3e-05
GO:0009889 regulation of biosynthetic process 66.67% (4/6) 4.4 1.4e-05 2.3e-05
GO:0010556 regulation of macromolecule biosynthetic process 66.67% (4/6) 4.42 1.3e-05 2.3e-05
GO:0010468 regulation of gene expression 66.67% (4/6) 4.43 1.3e-05 2.4e-05
GO:0005737 cytoplasm 66.67% (4/6) 4.37 1.5e-05 2.4e-05
GO:0031326 regulation of cellular biosynthetic process 66.67% (4/6) 4.4 1.4e-05 2.4e-05
GO:0031323 regulation of cellular metabolic process 66.67% (4/6) 4.28 1.9e-05 2.8e-05
GO:0060255 regulation of macromolecule metabolic process 66.67% (4/6) 4.29 1.9e-05 2.8e-05
GO:0019222 regulation of metabolic process 66.67% (4/6) 4.24 2.2e-05 3.1e-05
GO:0050794 regulation of cellular process 66.67% (4/6) 3.73 8.9e-05 0.000121
GO:0050789 regulation of biological process 66.67% (4/6) 3.65 0.000108 0.000142
GO:0016787 hydrolase activity 66.67% (4/6) 3.6 0.000124 0.000158
GO:0065007 biological regulation 66.67% (4/6) 3.55 0.000143 0.000176
GO:0097159 organic cyclic compound binding 83.33% (5/6) 2.54 0.000322 0.000387
GO:0005488 binding 83.33% (5/6) 1.88 0.00285 0.003325
GO:0005515 protein binding 50.0% (3/6) 2.74 0.00707 0.008026
GO:0110165 cellular anatomical entity 66.67% (4/6) 1.92 0.010799 0.011935
GO:0003824 catalytic activity 66.67% (4/6) 1.88 0.011786 0.012693
GO:0005575 cellular_component 66.67% (4/6) 1.74 0.016935 0.017782
GO:0003674 molecular_function 83.33% (5/6) 1.24 0.023386 0.023956
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (6) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms