Coexpression cluster: Cluster_3562 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003677 DNA binding 75.0% (3/4) 4.67 0.0001 0.003998
GO:0000786 nucleosome 25.0% (1/4) 9.27 0.001617 0.009237
GO:0030527 structural constituent of chromatin 25.0% (1/4) 9.66 0.001238 0.0099
GO:0140110 transcription regulator activity 50.0% (2/4) 4.97 0.001504 0.010026
GO:0003676 nucleic acid binding 75.0% (3/4) 3.51 0.00108 0.010802
GO:0043565 sequence-specific DNA binding 50.0% (2/4) 5.63 0.000603 0.012066
GO:0019219 regulation of nucleobase-containing compound metabolic process 50.0% (2/4) 4.29 0.003782 0.012607
GO:2001141 regulation of RNA biosynthetic process 50.0% (2/4) 4.42 0.003172 0.012686
GO:0006355 regulation of DNA-templated transcription 50.0% (2/4) 4.42 0.003172 0.012686
GO:0051252 regulation of RNA metabolic process 50.0% (2/4) 4.35 0.0035 0.012726
GO:0009889 regulation of biosynthetic process 50.0% (2/4) 3.98 0.005754 0.012788
GO:0031323 regulation of cellular metabolic process 50.0% (2/4) 3.87 0.006709 0.013419
GO:0031326 regulation of cellular biosynthetic process 50.0% (2/4) 3.98 0.005746 0.01352
GO:0019222 regulation of metabolic process 50.0% (2/4) 3.82 0.007137 0.013594
GO:0046982 protein heterodimerization activity 25.0% (1/4) 8.51 0.002746 0.013731
GO:0010556 regulation of macromolecule biosynthetic process 50.0% (2/4) 4.01 0.00555 0.013875
GO:0060255 regulation of macromolecule metabolic process 50.0% (2/4) 3.88 0.006631 0.013959
GO:0080090 regulation of primary metabolic process 50.0% (2/4) 4.1 0.004921 0.014061
GO:0003700 DNA-binding transcription factor activity 50.0% (2/4) 5.22 0.001062 0.014165
GO:0005634 nucleus 50.0% (2/4) 3.76 0.007804 0.01419
GO:0010468 regulation of gene expression 50.0% (2/4) 4.02 0.005477 0.014605
GO:0051171 regulation of nitrogen compound metabolic process 50.0% (2/4) 4.11 0.004831 0.014864
GO:0032993 protein-DNA complex 25.0% (1/4) 6.72 0.009425 0.016392
GO:0097159 organic cyclic compound binding 75.0% (3/4) 2.39 0.010561 0.017602
GO:0050794 regulation of cellular process 50.0% (2/4) 3.31 0.01424 0.022785
GO:0050789 regulation of biological process 50.0% (2/4) 3.24 0.01566 0.024093
GO:0065007 biological regulation 50.0% (2/4) 3.14 0.017952 0.026595
GO:0046983 protein dimerization activity 25.0% (1/4) 5.67 0.019525 0.026931
GO:0005198 structural molecule activity 25.0% (1/4) 5.71 0.018967 0.027096
GO:0043227 membrane-bounded organelle 50.0% (2/4) 2.82 0.027213 0.034016
GO:0005575 cellular_component 75.0% (3/4) 1.91 0.027169 0.035057
GO:0043231 intracellular membrane-bounded organelle 50.0% (2/4) 2.83 0.026827 0.035769
GO:0043226 organelle 50.0% (2/4) 2.62 0.0357 0.042
GO:0043229 intracellular organelle 50.0% (2/4) 2.62 0.035693 0.043264
GO:0005488 binding 75.0% (3/4) 1.73 0.038182 0.043637
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (4) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms