Coexpression cluster: Cluster_7853 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 100.0% (2/2) 7.98 1.6e-05 7.4e-05
GO:0010557 positive regulation of macromolecule biosynthetic process 100.0% (2/2) 8.02 1.5e-05 7.6e-05
GO:0031328 positive regulation of cellular biosynthetic process 100.0% (2/2) 8.02 1.5e-05 7.6e-05
GO:0009891 positive regulation of biosynthetic process 100.0% (2/2) 8.02 1.5e-05 7.6e-05
GO:1902680 positive regulation of RNA biosynthetic process 100.0% (2/2) 8.32 1e-05 8e-05
GO:0045893 positive regulation of DNA-templated transcription 100.0% (2/2) 8.32 1e-05 8e-05
GO:1990837 sequence-specific double-stranded DNA binding 100.0% (2/2) 7.67 2.4e-05 8.1e-05
GO:0009893 positive regulation of metabolic process 100.0% (2/2) 7.49 3.1e-05 8.4e-05
GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding 100.0% (2/2) 8.52 7e-06 8.5e-05
GO:0000976 transcription cis-regulatory region binding 100.0% (2/2) 7.77 2.1e-05 8.5e-05
GO:0001067 transcription regulatory region nucleic acid binding 100.0% (2/2) 7.77 2.1e-05 8.5e-05
GO:0046983 protein dimerization activity 100.0% (2/2) 7.67 2.4e-05 8.6e-05
GO:0031325 positive regulation of cellular metabolic process 100.0% (2/2) 7.71 2.3e-05 8.6e-05
GO:0010604 positive regulation of macromolecule metabolic process 100.0% (2/2) 7.49 3.1e-05 8.8e-05
GO:0051173 positive regulation of nitrogen compound metabolic process 100.0% (2/2) 7.51 3e-05 9e-05
GO:0048522 positive regulation of cellular process 100.0% (2/2) 7.54 2.9e-05 9.2e-05
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific 100.0% (2/2) 8.61 7e-06 9.4e-05
GO:0051254 positive regulation of RNA metabolic process 100.0% (2/2) 8.06 1.4e-05 9.9e-05
GO:0000987 cis-regulatory region sequence-specific DNA binding 100.0% (2/2) 8.75 5e-06 0.000103
GO:0048518 positive regulation of biological process 100.0% (2/2) 7.28 4.2e-05 0.000108
GO:0006357 regulation of transcription by RNA polymerase II 100.0% (2/2) 7.24 4.4e-05 0.000109
GO:0003690 double-stranded DNA binding 100.0% (2/2) 7.09 5.4e-05 0.000128
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding 100.0% (2/2) 8.84 5e-06 0.000136
GO:0045944 positive regulation of transcription by RNA polymerase II 100.0% (2/2) 9.1 3e-06 0.000189
GO:0043565 sequence-specific DNA binding 100.0% (2/2) 6.63 0.000102 0.000232
GO:0003700 DNA-binding transcription factor activity 100.0% (2/2) 6.22 0.00018 0.000395
GO:0140110 transcription regulator activity 100.0% (2/2) 5.97 0.000256 0.000541
GO:0006355 regulation of DNA-templated transcription 100.0% (2/2) 5.42 0.000545 0.001072
GO:2001141 regulation of RNA biosynthetic process 100.0% (2/2) 5.42 0.000545 0.001072
GO:0051252 regulation of RNA metabolic process 100.0% (2/2) 5.35 0.000603 0.001145
GO:0019219 regulation of nucleobase-containing compound metabolic process 100.0% (2/2) 5.29 0.000652 0.001199
GO:0003677 DNA binding 100.0% (2/2) 5.09 0.000868 0.001455
GO:0080090 regulation of primary metabolic process 100.0% (2/2) 5.1 0.000853 0.001473
GO:0051171 regulation of nitrogen compound metabolic process 100.0% (2/2) 5.11 0.000837 0.001491
GO:0009889 regulation of biosynthetic process 100.0% (2/2) 4.98 0.001001 0.001501
GO:0010556 regulation of macromolecule biosynthetic process 100.0% (2/2) 5.01 0.000964 0.001527
GO:0031326 regulation of cellular biosynthetic process 100.0% (2/2) 4.98 0.000999 0.001539
GO:0010468 regulation of gene expression 100.0% (2/2) 5.02 0.000951 0.00155
GO:0031323 regulation of cellular metabolic process 100.0% (2/2) 4.87 0.001171 0.001669
GO:0060255 regulation of macromolecule metabolic process 100.0% (2/2) 4.88 0.001157 0.001691
GO:0019222 regulation of metabolic process 100.0% (2/2) 4.82 0.001247 0.001734
GO:0050794 regulation of cellular process 100.0% (2/2) 4.31 0.002541 0.003448
GO:0050789 regulation of biological process 100.0% (2/2) 4.24 0.002804 0.003717
GO:0065007 biological regulation 100.0% (2/2) 4.14 0.003232 0.004186
GO:0003676 nucleic acid binding 100.0% (2/2) 3.93 0.004321 0.005473
GO:0005515 protein binding 100.0% (2/2) 3.74 0.00561 0.006951
GO:0097159 organic cyclic compound binding 100.0% (2/2) 2.8 0.020611 0.024996
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms