Coexpression cluster: Cluster_2124 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0004586 ornithine decarboxylase activity 33.33% (1/3) 13.29 0.0001 0.004193
GO:0033387 putrescine biosynthetic process from ornithine 33.33% (1/3) 13.29 0.0001 0.004193
GO:0009445 putrescine metabolic process 33.33% (1/3) 11.71 0.0003 0.005032
GO:0009446 putrescine biosynthetic process 33.33% (1/3) 11.71 0.0003 0.005032
GO:0006596 polyamine biosynthetic process 33.33% (1/3) 10.93 0.000514 0.007198
GO:0006591 ornithine metabolic process 33.33% (1/3) 11.86 0.00027 0.007548
GO:0006595 polyamine metabolic process 33.33% (1/3) 10.13 0.000893 0.01072
GO:0009889 regulation of biosynthetic process 66.67% (2/3) 4.4 0.002939 0.011756
GO:0019222 regulation of metabolic process 66.67% (2/3) 4.24 0.003654 0.011806
GO:0030597 RNA glycosylase activity 33.33% (1/3) 9.61 0.001277 0.011923
GO:0030598 rRNA N-glycosylase activity 33.33% (1/3) 9.61 0.001277 0.011923
GO:0051248 negative regulation of protein metabolic process 33.33% (1/3) 8.31 0.003137 0.011977
GO:0031323 regulation of cellular metabolic process 66.67% (2/3) 4.28 0.003433 0.012015
GO:0016831 carboxy-lyase activity 33.33% (1/3) 8.01 0.003879 0.012068
GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds 33.33% (1/3) 8.11 0.00361 0.01213
GO:0009308 amine metabolic process 33.33% (1/3) 7.94 0.004063 0.01219
GO:0031326 regulation of cellular biosynthetic process 66.67% (2/3) 4.4 0.002935 0.012326
GO:0060255 regulation of macromolecule metabolic process 66.67% (2/3) 4.29 0.003392 0.012388
GO:0010556 regulation of macromolecule biosynthetic process 66.67% (2/3) 4.42 0.002834 0.012527
GO:0034248 regulation of amide metabolic process 33.33% (1/3) 7.79 0.004496 0.012589
GO:0006417 regulation of translation 33.33% (1/3) 7.79 0.004496 0.012589
GO:0140102 catalytic activity, acting on a rRNA 33.33% (1/3) 8.58 0.002619 0.012939
GO:0010468 regulation of gene expression 66.67% (2/3) 4.43 0.002796 0.013047
GO:0080090 regulation of primary metabolic process 66.67% (2/3) 4.51 0.002509 0.013174
GO:0009309 amine biosynthetic process 33.33% (1/3) 9.15 0.001761 0.013449
GO:0042401 biogenic amine biosynthetic process 33.33% (1/3) 9.15 0.001761 0.013449
GO:0006576 biogenic amine metabolic process 33.33% (1/3) 8.64 0.002504 0.014023
GO:0017148 negative regulation of translation 33.33% (1/3) 8.77 0.002285 0.014763
GO:0034249 negative regulation of amide metabolic process 33.33% (1/3) 8.77 0.002285 0.014763
GO:0051171 regulation of nitrogen compound metabolic process 66.67% (2/3) 4.53 0.002463 0.014777
GO:0016830 carbon-carbon lyase activity 33.33% (1/3) 7.33 0.006193 0.01678
GO:0050794 regulation of cellular process 66.67% (2/3) 3.73 0.007367 0.019337
GO:0050789 regulation of biological process 66.67% (2/3) 3.65 0.008115 0.02005
GO:0051172 negative regulation of nitrogen compound metabolic process 33.33% (1/3) 6.96 0.008026 0.02043
GO:0010608 post-transcriptional regulation of gene expression 33.33% (1/3) 6.83 0.008756 0.021014
GO:0065007 biological regulation 66.67% (2/3) 3.55 0.009328 0.021764
GO:0051246 regulation of protein metabolic process 33.33% (1/3) 6.5 0.011022 0.025023
GO:0010629 negative regulation of gene expression 33.33% (1/3) 6.34 0.012275 0.026439
GO:1901605 alpha-amino acid metabolic process 33.33% (1/3) 6.35 0.012241 0.027058
GO:0009890 negative regulation of biosynthetic process 33.33% (1/3) 5.93 0.01631 0.031862
GO:0010558 negative regulation of macromolecule biosynthetic process 33.33% (1/3) 5.98 0.015787 0.032343
GO:0031327 negative regulation of cellular biosynthetic process 33.33% (1/3) 5.94 0.016241 0.032482
GO:0016829 lyase activity 33.33% (1/3) 5.98 0.015708 0.032986
GO:0009892 negative regulation of metabolic process 33.33% (1/3) 5.77 0.01817 0.033181
GO:0031324 negative regulation of cellular metabolic process 33.33% (1/3) 5.78 0.018072 0.033734
GO:0010605 negative regulation of macromolecule metabolic process 33.33% (1/3) 5.8 0.017786 0.033955
GO:0008150 biological_process 100.0% (3/3) 1.85 0.021524 0.038469
GO:0048519 negative regulation of biological process 33.33% (1/3) 5.38 0.023895 0.040143
GO:0006520 amino acid metabolic process 33.33% (1/3) 5.43 0.022961 0.040182
GO:0048523 negative regulation of cellular process 33.33% (1/3) 5.4 0.023477 0.040247
GO:0016798 hydrolase activity, acting on glycosyl bonds 33.33% (1/3) 5.24 0.026163 0.043091
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (3) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms