Coexpression cluster: Cluster_466 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0015248 sterol transporter activity 9.84% (12/122) 9.33 0.0 0.0
GO:0032934 sterol binding 9.84% (12/122) 8.67 0.0 0.0
GO:0005496 steroid binding 9.84% (12/122) 8.67 0.0 0.0
GO:0005319 lipid transporter activity 9.84% (12/122) 6.1 0.0 0.0
GO:0008289 lipid binding 9.84% (12/122) 4.59 0.0 0.0
GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway 4.1% (5/122) 8.11 0.0 0.0
GO:0009863 salicylic acid mediated signaling pathway 4.1% (5/122) 8.11 0.0 0.0
GO:2000022 regulation of jasmonic acid mediated signaling pathway 4.1% (5/122) 7.04 0.0 0.0
GO:2000031 regulation of salicylic acid mediated signaling pathway 4.1% (5/122) 6.99 0.0 0.0
GO:0048583 regulation of response to stimulus 6.56% (8/122) 4.76 0.0 0.0
GO:0050832 defense response to fungus 6.56% (8/122) 4.05 0.0 1e-06
GO:0009620 response to fungus 6.56% (8/122) 4.05 0.0 1e-06
GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity 3.28% (4/122) 6.69 0.0 1e-06
GO:0005829 cytosol 9.84% (12/122) 2.79 0.0 3e-06
GO:0006265 DNA topological change 3.28% (4/122) 6.16 0.0 5e-06
GO:0023051 regulation of signaling 4.1% (5/122) 4.97 1e-06 8e-06
GO:0010646 regulation of cell communication 4.1% (5/122) 4.98 1e-06 9e-06
GO:0042742 defense response to bacterium 4.1% (5/122) 4.92 1e-06 9e-06
GO:0009617 response to bacterium 4.1% (5/122) 4.92 1e-06 9e-06
GO:0003916 DNA topoisomerase activity 3.28% (4/122) 5.85 1e-06 9e-06
GO:0009966 regulation of signal transduction 4.1% (5/122) 4.98 1e-06 9e-06
GO:0005488 binding 41.8% (51/122) 0.89 2e-06 1.7e-05
GO:0097159 organic cyclic compound binding 30.33% (37/122) 1.08 5e-06 4.8e-05
GO:0009607 response to biotic stimulus 9.84% (12/122) 2.3 7e-06 5e-05
GO:0044419 biological process involved in interspecies interaction between organisms 9.84% (12/122) 2.3 7e-06 5e-05
GO:0031379 RNA-directed RNA polymerase complex 2.46% (3/122) 6.48 6e-06 5.1e-05
GO:0031380 nuclear RNA-directed RNA polymerase complex 2.46% (3/122) 6.48 6e-06 5.1e-05
GO:0043207 response to external biotic stimulus 9.84% (12/122) 2.3 7e-06 5.1e-05
GO:1900150 regulation of defense response to fungus 2.46% (3/122) 6.5 6e-06 5.3e-05
GO:0051707 response to other organism 9.84% (12/122) 2.3 7e-06 5.3e-05
GO:0098542 defense response to other organism 9.84% (12/122) 2.3 7e-06 5.3e-05
GO:0003968 RNA-dependent RNA polymerase activity 2.46% (3/122) 6.24 1e-05 6.8e-05
GO:0006952 defense response 9.84% (12/122) 2.23 1.1e-05 7.7e-05
GO:0009605 response to external stimulus 9.84% (12/122) 2.21 1.3e-05 8.3e-05
GO:0002831 regulation of response to biotic stimulus 2.46% (3/122) 5.77 2.5e-05 0.000163
GO:0032101 regulation of response to external stimulus 2.46% (3/122) 5.69 3.1e-05 0.00019
GO:0005515 protein binding 18.85% (23/122) 1.33 3.5e-05 0.000214
GO:0071103 DNA conformation change 3.28% (4/122) 4.44 4e-05 0.000235
GO:0016772 transferase activity, transferring phosphorus-containing groups 13.11% (16/122) 1.64 5.8e-05 0.000333
GO:0031347 regulation of defense response 2.46% (3/122) 5.29 6.8e-05 0.000383
GO:0032559 adenyl ribonucleotide binding 16.39% (20/122) 1.37 8.3e-05 0.000454
GO:0030422 siRNA processing 2.46% (3/122) 5.18 8.7e-05 0.000464
GO:0043231 intracellular membrane-bounded organelle 17.21% (21/122) 1.3 0.000116 0.000605
GO:0043227 membrane-bounded organelle 17.21% (21/122) 1.28 0.000129 0.000656
GO:0030554 adenyl nucleotide binding 16.39% (20/122) 1.32 0.00014 0.000697
GO:0004672 protein kinase activity 10.66% (13/122) 1.75 0.000146 0.000712
GO:0005215 transporter activity 9.84% (12/122) 1.82 0.000168 0.000801
GO:0032555 purine ribonucleotide binding 16.39% (20/122) 1.29 0.000175 0.000815
GO:0032553 ribonucleotide binding 16.39% (20/122) 1.28 0.000194 0.000889
GO:0097367 carbohydrate derivative binding 16.39% (20/122) 1.27 0.000215 0.000962
GO:0017076 purine nucleotide binding 16.39% (20/122) 1.24 0.000288 0.001267
GO:0070918 regulatory ncRNA processing 2.46% (3/122) 4.56 0.000306 0.001317
GO:0080134 regulation of response to stress 2.46% (3/122) 4.45 0.000375 0.001587
GO:0016773 phosphotransferase activity, alcohol group as acceptor 10.66% (13/122) 1.59 0.000402 0.001636
GO:0006468 protein phosphorylation 9.84% (12/122) 1.68 0.000398 0.001649
GO:0016740 transferase activity 17.21% (21/122) 1.15 0.000448 0.00179
GO:0016310 phosphorylation 9.84% (12/122) 1.64 0.00052 0.001975
GO:0000166 nucleotide binding 16.39% (20/122) 1.17 0.000515 0.001989
GO:1901265 nucleoside phosphate binding 16.39% (20/122) 1.17 0.000515 0.001989
GO:0016301 kinase activity 10.66% (13/122) 1.53 0.000596 0.002223
GO:0043168 anion binding 16.39% (20/122) 1.15 0.000642 0.002318
GO:0003674 molecular_function 50.0% (61/122) 0.5 0.000633 0.002326
GO:1901363 heterocyclic compound binding 16.39% (20/122) 1.13 0.000723 0.002572
GO:0036094 small molecule binding 16.39% (20/122) 1.12 0.000786 0.002751
GO:0043226 organelle 17.21% (21/122) 1.08 0.000867 0.002944
GO:0043229 intracellular organelle 17.21% (21/122) 1.08 0.000866 0.002986
GO:0005524 ATP binding 12.3% (15/122) 1.32 0.001024 0.003424
GO:0034062 5'-3' RNA polymerase activity 2.46% (3/122) 3.93 0.001063 0.003452
GO:0097747 RNA polymerase activity 2.46% (3/122) 3.93 0.001063 0.003452
GO:0030880 RNA polymerase complex 2.46% (3/122) 3.86 0.001232 0.003941
GO:0050896 response to stimulus 10.66% (13/122) 1.4 0.001394 0.004399
GO:0006950 response to stress 9.84% (12/122) 1.46 0.001522 0.004736
GO:0008094 ATP-dependent activity, acting on DNA 3.28% (4/122) 2.99 0.001725 0.005292
GO:0043531 ADP binding 5.74% (7/122) 2.02 0.001832 0.005546
GO:0035639 purine ribonucleoside triphosphate binding 12.3% (15/122) 1.22 0.002041 0.006097
GO:0051276 chromosome organization 3.28% (4/122) 2.82 0.002665 0.007854
GO:0016853 isomerase activity 3.28% (4/122) 2.68 0.003725 0.010836
GO:0043170 macromolecule metabolic process 18.85% (23/122) 0.79 0.006193 0.017784
GO:0016020 membrane 12.3% (15/122) 1.03 0.006689 0.018967
GO:0036211 protein modification process 10.66% (13/122) 1.1 0.007792 0.021817
GO:0006796 phosphate-containing compound metabolic process 9.84% (12/122) 1.13 0.008862 0.024508
GO:0140096 catalytic activity, acting on a protein 11.48% (14/122) 1.02 0.009062 0.024756
GO:0006793 phosphorus metabolic process 9.84% (12/122) 1.13 0.009251 0.024966
GO:0061695 transferase complex, transferring phosphorus-containing groups 2.46% (3/122) 2.73 0.010846 0.028923
GO:0140640 catalytic activity, acting on a nucleic acid 5.74% (7/122) 1.51 0.012157 0.032038
GO:0006259 DNA metabolic process 4.92% (6/122) 1.61 0.014397 0.037498
GO:0016779 nucleotidyltransferase activity 2.46% (3/122) 2.55 0.01501 0.038647
GO:0140097 catalytic activity, acting on DNA 3.28% (4/122) 2.07 0.015651 0.039838
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (122) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms