Coexpression cluster: Cluster_724 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0031984 organelle subcompartment 12.36% (11/89) 5.47 0.0 0.0
GO:0016759 cellulose synthase activity 10.11% (9/89) 6.4 0.0 0.0
GO:0016760 cellulose synthase (UDP-forming) activity 10.11% (9/89) 6.44 0.0 0.0
GO:0005802 trans-Golgi network 12.36% (11/89) 5.64 0.0 0.0
GO:0009833 plant-type primary cell wall biogenesis 10.11% (9/89) 6.45 0.0 0.0
GO:0098791 Golgi apparatus subcompartment 12.36% (11/89) 5.51 0.0 0.0
GO:0030243 cellulose metabolic process 10.11% (9/89) 6.21 0.0 0.0
GO:0030244 cellulose biosynthetic process 10.11% (9/89) 6.21 0.0 0.0
GO:0016051 carbohydrate biosynthetic process 12.36% (11/89) 5.01 0.0 0.0
GO:0051273 beta-glucan metabolic process 10.11% (9/89) 5.88 0.0 0.0
GO:0009832 plant-type cell wall biogenesis 10.11% (9/89) 5.9 0.0 0.0
GO:0051274 beta-glucan biosynthetic process 10.11% (9/89) 5.88 0.0 0.0
GO:0071669 plant-type cell wall organization or biogenesis 10.11% (9/89) 5.69 0.0 0.0
GO:0042546 cell wall biogenesis 10.11% (9/89) 5.66 0.0 0.0
GO:0009250 glucan biosynthetic process 10.11% (9/89) 5.51 0.0 0.0
GO:0000271 polysaccharide biosynthetic process 10.11% (9/89) 5.2 0.0 0.0
GO:0044042 glucan metabolic process 10.11% (9/89) 5.1 0.0 0.0
GO:0071554 cell wall organization or biogenesis 10.11% (9/89) 5.05 0.0 0.0
GO:0044085 cellular component biogenesis 10.11% (9/89) 5.03 0.0 0.0
GO:0035251 UDP-glucosyltransferase activity 10.11% (9/89) 4.76 0.0 0.0
GO:0005976 polysaccharide metabolic process 10.11% (9/89) 4.61 0.0 0.0
GO:1903047 mitotic cell cycle process 10.11% (9/89) 4.62 0.0 0.0
GO:0015976 carbon utilization 4.49% (4/89) 8.79 0.0 0.0
GO:0046527 glucosyltransferase activity 10.11% (9/89) 4.48 0.0 0.0
GO:0005975 carbohydrate metabolic process 14.61% (13/89) 3.29 0.0 0.0
GO:0004089 carbonate dehydratase activity 4.49% (4/89) 7.79 0.0 0.0
GO:0008194 UDP-glycosyltransferase activity 10.11% (9/89) 3.91 0.0 0.0
GO:0022402 cell cycle process 10.11% (9/89) 3.77 0.0 0.0
GO:0016758 hexosyltransferase activity 10.11% (9/89) 3.7 0.0 0.0
GO:0016740 transferase activity 26.97% (24/89) 1.8 0.0 0.0
GO:0030126 COPI vesicle coat 4.49% (4/89) 5.93 1e-06 6e-06
GO:0003824 catalytic activity 40.45% (36/89) 1.16 1e-06 7e-06
GO:0009991 response to extracellular stimulus 4.49% (4/89) 5.78 1e-06 9e-06
GO:0031667 response to nutrient levels 4.49% (4/89) 5.78 1e-06 9e-06
GO:0016757 glycosyltransferase activity 10.11% (9/89) 3.09 1e-06 1.1e-05
GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum 4.49% (4/89) 5.66 1e-06 1.2e-05
GO:0009059 macromolecule biosynthetic process 10.11% (9/89) 3.0 2e-06 1.7e-05
GO:0006891 intra-Golgi vesicle-mediated transport 4.49% (4/89) 5.41 3e-06 2.2e-05
GO:0016836 hydro-lyase activity 4.49% (4/89) 5.2 5e-06 3.7e-05
GO:1901576 organic substance biosynthetic process 14.61% (13/89) 2.16 7e-06 5e-05
GO:0030120 vesicle coat 4.49% (4/89) 5.06 7e-06 5.2e-05
GO:0005886 plasma membrane 11.24% (10/89) 2.51 1.1e-05 7.5e-05
GO:0009058 biosynthetic process 14.61% (13/89) 2.08 1.2e-05 8.1e-05
GO:0030117 membrane coat 4.49% (4/89) 4.79 1.5e-05 0.000101
GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport 4.49% (4/89) 4.7 1.9e-05 0.000125
GO:0016301 kinase activity 14.61% (13/89) 1.99 2.3e-05 0.00015
GO:0044238 primary metabolic process 31.46% (28/89) 1.13 3.3e-05 0.000208
GO:0016835 carbon-oxygen lyase activity 4.49% (4/89) 4.43 4e-05 0.000244
GO:0016772 transferase activity, transferring phosphorus-containing groups 14.61% (13/89) 1.79 9.2e-05 0.000551
GO:0071704 organic substance metabolic process 31.46% (28/89) 1.04 9.9e-05 0.000581
GO:0006796 phosphate-containing compound metabolic process 14.61% (13/89) 1.7 0.000169 0.000972
GO:0006793 phosphorus metabolic process 14.61% (13/89) 1.7 0.000178 0.001009
GO:0044237 cellular metabolic process 25.84% (23/89) 1.14 0.000188 0.001045
GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water 2.25% (2/89) 6.63 0.000197 0.00107
GO:0004618 phosphoglycerate kinase activity 2.25% (2/89) 6.59 0.000208 0.001093
GO:0048193 Golgi vesicle transport 4.49% (4/89) 3.81 0.000205 0.001094
GO:0008152 metabolic process 31.46% (28/89) 0.97 0.000228 0.001176
GO:0003674 molecular_function 53.93% (48/89) 0.61 0.000258 0.001307
GO:0046658 obsolete anchored component of plasma membrane 3.37% (3/89) 4.51 0.000335 0.001672
GO:0044249 cellular biosynthetic process 11.24% (10/89) 1.9 0.000357 0.001748
GO:0006468 protein phosphorylation 11.24% (10/89) 1.87 0.000413 0.001989
GO:0016310 phosphorylation 11.24% (10/89) 1.83 0.000523 0.002479
GO:0004672 protein kinase activity 11.24% (10/89) 1.82 0.000541 0.002526
GO:0019319 hexose biosynthetic process 2.25% (2/89) 5.67 0.00074 0.003346
GO:0006094 gluconeogenesis 2.25% (2/89) 5.67 0.00074 0.003346
GO:0016774 phosphotransferase activity, carboxyl group as acceptor 2.25% (2/89) 5.6 0.000813 0.003622
GO:0046364 monosaccharide biosynthetic process 2.25% (2/89) 5.5 0.000939 0.00412
GO:0042284 sphingolipid delta-4 desaturase activity 1.12% (1/89) 9.91 0.001036 0.00448
GO:0016773 phosphotransferase activity, alcohol group as acceptor 11.24% (10/89) 1.67 0.001205 0.005133
GO:0043170 macromolecule metabolic process 22.47% (20/89) 1.05 0.001246 0.005232
GO:0071840 cellular component organization or biogenesis 10.11% (9/89) 1.78 0.001282 0.005308
GO:0016829 lyase activity 4.49% (4/89) 3.09 0.001311 0.005353
GO:0005524 ATP binding 13.48% (12/89) 1.45 0.001419 0.005639
GO:0006886 intracellular protein transport 4.49% (4/89) 3.07 0.001404 0.005654
GO:0008150 biological_process 42.7% (38/89) 0.62 0.001822 0.007141
GO:0035639 purine ribonucleoside triphosphate binding 13.48% (12/89) 1.35 0.00255 0.009863
GO:0015031 protein transport 4.49% (4/89) 2.73 0.003229 0.012329
GO:0071705 nitrogen compound transport 5.62% (5/89) 2.32 0.003416 0.012876
GO:0098796 membrane protein complex 4.49% (4/89) 2.68 0.003631 0.013514
GO:0009987 cellular process 30.34% (27/89) 0.72 0.004447 0.016341
GO:0036211 protein modification process 12.36% (11/89) 1.32 0.004619 0.016559
GO:0006006 glucose metabolic process 2.25% (2/89) 4.33 0.004571 0.016592
GO:0016192 vesicle-mediated transport 4.49% (4/89) 2.46 0.006322 0.022393
GO:0009191 ribonucleoside diphosphate catabolic process 2.25% (2/89) 3.99 0.007246 0.022663
GO:0009134 nucleoside diphosphate catabolic process 2.25% (2/89) 3.99 0.007246 0.022663
GO:0019364 pyridine nucleotide catabolic process 2.25% (2/89) 3.97 0.007377 0.02283
GO:0072526 pyridine-containing compound catabolic process 2.25% (2/89) 3.96 0.007526 0.023048
GO:0006096 glycolytic process 2.25% (2/89) 3.99 0.00723 0.023103
GO:0046031 ADP metabolic process 2.25% (2/89) 3.99 0.00723 0.023103
GO:0046032 ADP catabolic process 2.25% (2/89) 3.99 0.00723 0.023103
GO:0009135 purine nucleoside diphosphate metabolic process 2.25% (2/89) 3.99 0.00723 0.023103
GO:0009137 purine nucleoside diphosphate catabolic process 2.25% (2/89) 3.99 0.00723 0.023103
GO:0009179 purine ribonucleoside diphosphate metabolic process 2.25% (2/89) 3.99 0.00723 0.023103
GO:0009181 purine ribonucleoside diphosphate catabolic process 2.25% (2/89) 3.99 0.00723 0.023103
GO:0045184 establishment of protein localization 4.49% (4/89) 2.43 0.006804 0.023813
GO:0016020 membrane 13.48% (12/89) 1.16 0.007055 0.024403
GO:0009261 ribonucleotide catabolic process 2.25% (2/89) 3.89 0.008186 0.024559
GO:0009154 purine ribonucleotide catabolic process 2.25% (2/89) 3.9 0.008169 0.02476
GO:0043167 ion binding 19.1% (17/89) 0.89 0.008861 0.025049
GO:0009166 nucleotide catabolic process 2.25% (2/89) 3.84 0.008818 0.025171
GO:0004713 protein tyrosine kinase activity 2.25% (2/89) 3.84 0.008783 0.025315
GO:0009185 ribonucleoside diphosphate metabolic process 2.25% (2/89) 3.85 0.008641 0.025404
GO:0009132 nucleoside diphosphate metabolic process 2.25% (2/89) 3.85 0.008729 0.02541
GO:0006195 purine nucleotide catabolic process 2.25% (2/89) 3.86 0.00857 0.025451
GO:1901292 nucleoside phosphate catabolic process 2.25% (2/89) 3.81 0.009161 0.02565
GO:0033036 macromolecule localization 4.49% (4/89) 2.26 0.01 0.026972
GO:0046907 intracellular transport 4.49% (4/89) 2.27 0.009744 0.027026
GO:0070727 cellular macromolecule localization 4.49% (4/89) 2.27 0.009934 0.027043
GO:0008104 protein localization 4.49% (4/89) 2.27 0.009857 0.027083
GO:0032559 adenyl ribonucleotide binding 13.48% (12/89) 1.09 0.010278 0.027471
GO:0072523 purine-containing compound catabolic process 2.25% (2/89) 3.7 0.010646 0.027944
GO:0019318 hexose metabolic process 2.25% (2/89) 3.7 0.010568 0.027991
GO:0051649 establishment of localization in cell 4.49% (4/89) 2.22 0.010927 0.028428
GO:0046034 ATP metabolic process 2.25% (2/89) 3.62 0.011697 0.029144
GO:0015689 molybdate ion transport 1.12% (1/89) 6.42 0.011634 0.029233
GO:0015098 molybdate ion transmembrane transporter activity 1.12% (1/89) 6.42 0.011634 0.029233
GO:0140096 catalytic activity, acting on a protein 12.36% (11/89) 1.13 0.011512 0.029431
GO:0043412 macromolecule modification 12.36% (11/89) 1.13 0.011454 0.029538
GO:0009205 purine ribonucleoside triphosphate metabolic process 2.25% (2/89) 3.54 0.012983 0.032076
GO:0009144 purine nucleoside triphosphate metabolic process 2.25% (2/89) 3.53 0.013281 0.03254
GO:0030554 adenyl nucleotide binding 13.48% (12/89) 1.04 0.01366 0.03319
GO:1901564 organonitrogen compound metabolic process 15.73% (14/89) 0.92 0.014747 0.035248
GO:1901136 carbohydrate derivative catabolic process 2.25% (2/89) 3.45 0.014639 0.035278
GO:0032555 purine ribonucleotide binding 13.48% (12/89) 1.01 0.015393 0.036496
GO:0032553 ribonucleotide binding 13.48% (12/89) 1.0 0.016318 0.038381
GO:0005996 monosaccharide metabolic process 2.25% (2/89) 3.36 0.016522 0.038552
GO:0009199 ribonucleoside triphosphate metabolic process 2.25% (2/89) 3.32 0.017308 0.039754
GO:0097367 carbohydrate derivative binding 13.48% (12/89) 0.99 0.017217 0.039857
GO:0006090 pyruvate metabolic process 2.25% (2/89) 3.32 0.017501 0.039885
GO:0009141 nucleoside triphosphate metabolic process 2.25% (2/89) 3.28 0.018306 0.041399
GO:0046434 organophosphate catabolic process 2.25% (2/89) 3.25 0.019176 0.043037
GO:0008270 zinc ion binding 4.49% (4/89) 1.96 0.019836 0.043199
GO:0046513 ceramide biosynthetic process 1.12% (1/89) 5.61 0.020235 0.043423
GO:0046496 nicotinamide nucleotide metabolic process 2.25% (2/89) 3.23 0.019656 0.04345
GO:0019362 pyridine nucleotide metabolic process 2.25% (2/89) 3.22 0.019809 0.043461
GO:0017076 purine nucleotide binding 13.48% (12/89) 0.96 0.020184 0.043634
GO:0005768 endosome 2.25% (2/89) 3.23 0.019631 0.043723
GO:0072524 pyridine-containing compound metabolic process 2.25% (2/89) 3.15 0.021625 0.046071
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (89) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms