Coexpression cluster: Cluster_760 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016817 hydrolase activity, acting on acid anhydrides 12.16% (9/74) 3.33 0.0 3.3e-05
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 12.16% (9/74) 3.34 0.0 4.5e-05
GO:0016462 pyrophosphatase activity 12.16% (9/74) 3.37 0.0 7.9e-05
GO:0017111 ribonucleoside triphosphate phosphatase activity 10.81% (8/74) 3.29 2e-06 0.000139
GO:0004252 serine-type endopeptidase activity 5.41% (4/74) 4.46 3.7e-05 0.002373
GO:0016787 hydrolase activity 18.92% (14/74) 1.79 4.4e-05 0.002383
GO:0071028 nuclear mRNA surveillance 2.7% (2/74) 7.51 5.8e-05 0.002676
GO:0034475 U4 snRNA 3'-end processing 2.7% (2/74) 7.15 9.5e-05 0.003844
GO:0034661 ncRNA catabolic process 2.7% (2/74) 6.23 0.000345 0.003963
GO:0016075 rRNA catabolic process 2.7% (2/74) 6.23 0.000345 0.003963
GO:0017171 serine hydrolase activity 5.41% (4/74) 3.66 0.000299 0.004181
GO:0008236 serine-type peptidase activity 5.41% (4/74) 3.66 0.000299 0.004181
GO:0034427 nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' 2.7% (2/74) 6.23 0.000341 0.004229
GO:0016180 snRNA processing 2.7% (2/74) 6.25 0.000335 0.004318
GO:0034472 snRNA 3'-end processing 2.7% (2/74) 6.35 0.00029 0.004448
GO:0000176 nuclear exosome (RNase complex) 2.7% (2/74) 6.25 0.000332 0.004456
GO:0005488 binding 40.54% (30/74) 0.85 0.000407 0.004516
GO:0016074 sno(s)RNA metabolic process 2.7% (2/74) 6.67 0.000188 0.004654
GO:0016072 rRNA metabolic process 5.41% (4/74) 3.68 0.000289 0.004661
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 2.7% (2/74) 6.37 0.000281 0.00477
GO:0071051 polyadenylation-dependent snoRNA 3'-end processing 2.7% (2/74) 6.9 0.000136 0.004861
GO:0071027 nuclear RNA surveillance 2.7% (2/74) 6.53 0.000227 0.004877
GO:0043144 sno(s)RNA processing 2.7% (2/74) 6.68 0.000183 0.004917
GO:0016887 ATP hydrolysis activity 6.76% (5/74) 3.15 0.000263 0.004986
GO:0000177 cytoplasmic exosome (RNase complex) 2.7% (2/74) 6.56 0.000217 0.004992
GO:0006396 RNA processing 8.11% (6/74) 2.75 0.00028 0.005016
GO:0043628 regulatory ncRNA 3'-end processing 2.7% (2/74) 6.72 0.000174 0.005097
GO:0031126 sno(s)RNA 3'-end processing 2.7% (2/74) 6.72 0.000174 0.005097
GO:0071025 RNA surveillance 2.7% (2/74) 6.44 0.000256 0.005159
GO:0000291 nuclear-transcribed mRNA catabolic process, exonucleolytic 2.7% (2/74) 5.93 0.00052 0.005234
GO:0000178 exosome (RNase complex) 2.7% (2/74) 5.97 0.00049 0.005256
GO:1905354 exoribonuclease complex 2.7% (2/74) 5.94 0.000512 0.005322
GO:0006508 proteolysis 8.11% (6/74) 2.52 0.000656 0.006399
GO:0003674 molecular_function 54.05% (40/74) 0.61 0.000765 0.007243
GO:0016073 snRNA metabolic process 2.7% (2/74) 5.45 0.001002 0.007871
GO:0001113 transcription open complex formation at RNA polymerase II promoter 1.35% (1/74) 9.99 0.000985 0.007927
GO:0001112 DNA-templated transcription open complex formation 1.35% (1/74) 9.99 0.000985 0.007927
GO:0001120 protein-DNA complex remodeling 1.35% (1/74) 9.99 0.000985 0.007927
GO:0034367 protein-containing complex remodeling 1.35% (1/74) 9.99 0.000985 0.007927
GO:0016071 mRNA metabolic process 5.41% (4/74) 3.23 0.000925 0.008273
GO:0000470 maturation of LSU-rRNA 2.7% (2/74) 5.51 0.000924 0.008501
GO:0004175 endopeptidase activity 5.41% (4/74) 3.13 0.001199 0.00919
GO:0008233 peptidase activity 6.76% (5/74) 2.58 0.001532 0.011471
GO:0034470 ncRNA processing 5.41% (4/74) 2.91 0.002064 0.015106
GO:0016070 RNA metabolic process 9.46% (7/74) 1.96 0.002154 0.015413
GO:0003924 GTPase activity 4.05% (3/74) 3.55 0.002247 0.01573
GO:0005525 GTP binding 4.05% (3/74) 3.49 0.002528 0.016958
GO:0032561 guanyl ribonucleotide binding 4.05% (3/74) 3.49 0.002528 0.016958
GO:0000380 alternative mRNA splicing, via spliceosome 1.35% (1/74) 8.6 0.002583 0.016973
GO:0070918 regulatory ncRNA processing 2.7% (2/74) 4.69 0.002802 0.01769
GO:0019001 guanyl nucleotide binding 4.05% (3/74) 3.44 0.002749 0.017706
GO:0022625 cytosolic large ribosomal subunit 2.7% (2/74) 4.65 0.002988 0.018151
GO:0005673 transcription factor TFIIE complex 1.35% (1/74) 8.4 0.002951 0.018275
GO:0043167 ion binding 21.62% (16/74) 1.07 0.003148 0.018769
GO:0097159 organic cyclic compound binding 27.03% (20/74) 0.91 0.003223 0.018872
GO:0005846 nuclear cap binding complex 1.35% (1/74) 8.23 0.00332 0.019088
GO:0034655 nucleobase-containing compound catabolic process 4.05% (3/74) 3.33 0.003425 0.019349
GO:0009143 nucleoside triphosphate catabolic process 1.35% (1/74) 7.82 0.004424 0.023351
GO:0015934 large ribosomal subunit 2.7% (2/74) 4.36 0.004389 0.023556
GO:0046700 heterocycle catabolic process 4.05% (3/74) 3.21 0.004357 0.023779
GO:0044270 cellular nitrogen compound catabolic process 4.05% (3/74) 3.21 0.004357 0.023779
GO:0009057 macromolecule catabolic process 5.41% (4/74) 2.58 0.004644 0.02412
GO:0000956 nuclear-transcribed mRNA catabolic process 2.7% (2/74) 4.2 0.005431 0.027757
GO:0019439 aromatic compound catabolic process 4.05% (3/74) 3.04 0.006033 0.030352
GO:1901361 organic cyclic compound catabolic process 4.05% (3/74) 3.01 0.006326 0.030864
GO:0031123 RNA 3'-end processing 2.7% (2/74) 4.1 0.006253 0.030978
GO:0034660 ncRNA metabolic process 5.41% (4/74) 2.43 0.006696 0.032181
GO:0046872 metal ion binding 9.46% (7/74) 1.63 0.007496 0.035494
GO:0006139 nucleobase-containing compound metabolic process 12.16% (9/74) 1.37 0.007795 0.036377
GO:0006402 mRNA catabolic process 2.7% (2/74) 3.89 0.008243 0.037918
GO:0019773 proteasome core complex, alpha-subunit complex 1.35% (1/74) 6.84 0.008706 0.038935
GO:0043169 cation binding 9.46% (7/74) 1.59 0.008605 0.039027
GO:1901575 organic substance catabolic process 6.76% (5/74) 1.97 0.00919 0.040537
GO:0000398 mRNA splicing, via spliceosome 2.7% (2/74) 3.78 0.009568 0.041633
GO:0047429 nucleoside triphosphate diphosphatase activity 1.35% (1/74) 6.61 0.01017 0.043664
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 2.7% (2/74) 3.7 0.010608 0.044942
GO:0009056 catabolic process 6.76% (5/74) 1.9 0.01122 0.046319
GO:0006401 RNA catabolic process 2.7% (2/74) 3.64 0.011377 0.046372
GO:0000339 RNA cap binding 1.35% (1/74) 6.48 0.011145 0.046606
GO:0044391 ribosomal subunit 2.7% (2/74) 3.63 0.011644 0.046868
GO:0046483 heterocycle metabolic process 12.16% (9/74) 1.27 0.0119 0.047306
GO:0000375 RNA splicing, via transesterification reactions 2.7% (2/74) 3.58 0.012325 0.048397
GO:0005832 chaperonin-containing T-complex 1.35% (1/74) 6.26 0.01297 0.049719
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (74) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms