Coexpression cluster: Cluster_394 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor 6.19% (6/97) 7.7 0.0 0.0
GO:0016174 NAD(P)H oxidase H2O2-forming activity 5.15% (5/97) 7.75 0.0 0.0
GO:0016651 oxidoreductase activity, acting on NAD(P)H 6.19% (6/97) 5.59 0.0 0.0
GO:0000506 glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex 3.09% (3/97) 8.66 0.0 5e-06
GO:0046622 positive regulation of organ growth 2.06% (2/97) 10.01 2e-06 7.1e-05
GO:0048639 positive regulation of developmental growth 2.06% (2/97) 10.01 2e-06 7.1e-05
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen 4.12% (4/97) 5.49 2e-06 8.4e-05
GO:0051213 dioxygenase activity 5.15% (5/97) 4.73 2e-06 9e-05
GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen 4.12% (4/97) 5.26 4e-06 0.000139
GO:0051094 positive regulation of developmental process 2.06% (2/97) 9.07 7e-06 0.000173
GO:0051240 positive regulation of multicellular organismal process 2.06% (2/97) 9.07 7e-06 0.000173
GO:0009873 ethylene-activated signaling pathway 3.09% (3/97) 6.34 8e-06 0.000191
GO:0016491 oxidoreductase activity 12.37% (12/97) 2.15 1.8e-05 0.000401
GO:0046620 regulation of organ growth 2.06% (2/97) 8.24 2.1e-05 0.000441
GO:0006505 GPI anchor metabolic process 3.09% (3/97) 5.56 3.9e-05 0.000721
GO:0006506 GPI anchor biosynthetic process 3.09% (3/97) 5.56 3.9e-05 0.000721
GO:0004601 peroxidase activity 4.12% (4/97) 4.23 6.8e-05 0.001111
GO:0016684 oxidoreductase activity, acting on peroxide as acceptor 4.12% (4/97) 4.23 6.8e-05 0.001111
GO:0016209 antioxidant activity 4.12% (4/97) 4.02 0.000118 0.001647
GO:0000160 phosphorelay signal transduction system 3.09% (3/97) 5.03 0.000117 0.001716
GO:0048638 regulation of developmental growth 2.06% (2/97) 7.01 0.000116 0.001795
GO:0006664 glycolipid metabolic process 3.09% (3/97) 4.73 0.000215 0.002622
GO:1903509 liposaccharide metabolic process 3.09% (3/97) 4.73 0.000215 0.002622
GO:0009247 glycolipid biosynthetic process 3.09% (3/97) 4.74 0.000209 0.002789
GO:0006497 protein lipidation 3.09% (3/97) 4.66 0.000245 0.002867
GO:0140534 endoplasmic reticulum protein-containing complex 3.09% (3/97) 4.42 0.000399 0.004495
GO:0006661 phosphatidylinositol biosynthetic process 3.09% (3/97) 4.35 0.000463 0.005028
GO:0005509 calcium ion binding 4.12% (4/97) 3.46 0.000519 0.005433
GO:0009755 hormone-mediated signaling pathway 3.09% (3/97) 4.22 0.000603 0.006091
GO:0004867 serine-type endopeptidase inhibitor activity 2.06% (2/97) 5.64 0.000776 0.007332
GO:0022616 DNA strand elongation 2.06% (2/97) 5.57 0.000851 0.007337
GO:0006271 DNA strand elongation involved in DNA replication 2.06% (2/97) 5.57 0.000851 0.007337
GO:0045927 positive regulation of growth 2.06% (2/97) 5.6 0.000819 0.007503
GO:0046467 membrane lipid biosynthetic process 3.09% (3/97) 4.09 0.000773 0.007547
GO:0006643 membrane lipid metabolic process 3.09% (3/97) 3.98 0.000973 0.008143
GO:0046474 glycerophospholipid biosynthetic process 3.09% (3/97) 3.92 0.00109 0.008873
GO:0051239 regulation of multicellular organismal process 2.06% (2/97) 5.28 0.001257 0.009445
GO:0030414 peptidase inhibitor activity 2.06% (2/97) 5.3 0.001234 0.009515
GO:0004866 endopeptidase inhibitor activity 2.06% (2/97) 5.3 0.001234 0.009515
GO:0061135 endopeptidase regulator activity 2.06% (2/97) 5.25 0.001312 0.009613
GO:0061134 peptidase regulator activity 2.06% (2/97) 5.11 0.001605 0.011468
GO:0045017 glycerolipid biosynthetic process 3.09% (3/97) 3.7 0.001665 0.011616
GO:0046488 phosphatidylinositol metabolic process 3.09% (3/97) 3.67 0.00177 0.012059
GO:0003700 DNA-binding transcription factor activity 6.19% (6/97) 2.2 0.002043 0.012733
GO:0040008 regulation of growth 2.06% (2/97) 4.97 0.001925 0.012821
GO:2001141 regulation of RNA biosynthetic process 8.25% (8/97) 1.82 0.002024 0.012894
GO:0006355 regulation of DNA-templated transcription 8.25% (8/97) 1.82 0.002024 0.012894
GO:0008654 phospholipid biosynthetic process 3.09% (3/97) 3.54 0.002285 0.013949
GO:0051252 regulation of RNA metabolic process 8.25% (8/97) 1.75 0.002749 0.016441
GO:0006650 glycerophospholipid metabolic process 3.09% (3/97) 3.35 0.003329 0.019506
GO:0019219 regulation of nucleobase-containing compound metabolic process 8.25% (8/97) 1.69 0.003489 0.020046
GO:0008535 respiratory chain complex IV assembly 1.03% (1/97) 7.9 0.004188 0.023155
GO:0033617 mitochondrial cytochrome c oxidase assembly 1.03% (1/97) 7.9 0.004188 0.023155
GO:0050793 regulation of developmental process 2.06% (2/97) 4.37 0.004366 0.023689
GO:0046486 glycerolipid metabolic process 3.09% (3/97) 3.14 0.004947 0.024992
GO:1902679 negative regulation of RNA biosynthetic process 2.06% (2/97) 4.28 0.004931 0.025348
GO:0045892 negative regulation of DNA-templated transcription 2.06% (2/97) 4.28 0.004931 0.025348
GO:0140110 transcription regulator activity 6.19% (6/97) 1.95 0.004804 0.025593
GO:0051253 negative regulation of RNA metabolic process 2.06% (2/97) 4.07 0.006508 0.032322
GO:0051171 regulation of nitrogen compound metabolic process 8.25% (8/97) 1.51 0.007253 0.03542
GO:0080090 regulation of primary metabolic process 8.25% (8/97) 1.5 0.007656 0.036776
GO:0003677 DNA binding 8.25% (8/97) 1.49 0.008035 0.03797
GO:0140678 molecular function inhibitor activity 2.06% (2/97) 3.85 0.008647 0.039589
GO:0004857 enzyme inhibitor activity 2.06% (2/97) 3.87 0.008513 0.039591
GO:0031418 L-ascorbic acid binding 1.03% (1/97) 6.79 0.009 0.040568
GO:0008310 single-stranded DNA 3'-5' DNA exonuclease activity 1.03% (1/97) 6.64 0.009959 0.044213
GO:0006644 phospholipid metabolic process 3.09% (3/97) 2.75 0.010468 0.04445
GO:1901137 carbohydrate derivative biosynthetic process 3.09% (3/97) 2.76 0.010236 0.044765
GO:0006273 lagging strand elongation 1.03% (1/97) 6.26 0.012991 0.044783
GO:0010468 regulation of gene expression 8.25% (8/97) 1.42 0.010425 0.04492
GO:1990234 transferase complex 4.12% (4/97) 2.15 0.012964 0.045221
GO:0019511 peptidyl-proline hydroxylation 1.03% (1/97) 6.28 0.012832 0.045299
GO:0031543 peptidyl-proline dioxygenase activity 1.03% (1/97) 6.28 0.012832 0.045299
GO:0010556 regulation of macromolecule biosynthetic process 8.25% (8/97) 1.41 0.010827 0.045318
GO:0005886 plasma membrane 6.19% (6/97) 1.65 0.012531 0.045329
GO:0004656 procollagen-proline 4-dioxygenase activity 1.03% (1/97) 6.31 0.012513 0.04583
GO:0019471 4-hydroxyproline metabolic process 1.03% (1/97) 6.31 0.012513 0.04583
GO:0031545 peptidyl-proline 4-dioxygenase activity 1.03% (1/97) 6.31 0.012513 0.04583
GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline 1.03% (1/97) 6.31 0.012513 0.04583
GO:0019798 procollagen-proline dioxygenase activity 1.03% (1/97) 6.31 0.012513 0.04583
GO:0045934 negative regulation of nucleobase-containing compound metabolic process 2.06% (2/97) 3.66 0.01123 0.046345
GO:0045004 DNA replication proofreading 1.03% (1/97) 6.15 0.013947 0.046971
GO:0006287 base-excision repair, gap-filling 1.03% (1/97) 6.15 0.013947 0.046971
GO:0004725 protein tyrosine phosphatase activity 1.03% (1/97) 6.12 0.014266 0.047498
GO:0009889 regulation of biosynthetic process 8.25% (8/97) 1.38 0.011996 0.047499
GO:0008297 single-stranded DNA exodeoxyribonuclease activity 1.03% (1/97) 6.41 0.011716 0.047677
GO:0031326 regulation of cellular biosynthetic process 8.25% (8/97) 1.38 0.011947 0.047954
GO:1990837 sequence-specific double-stranded DNA binding 3.09% (3/97) 2.65 0.012463 0.048689
GO:0004045 aminoacyl-tRNA hydrolase activity 1.03% (1/97) 6.04 0.015061 0.049032
GO:0008622 epsilon DNA polymerase complex 1.03% (1/97) 6.06 0.014902 0.049059
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (97) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms