Coexpression cluster: Cluster_65 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0140657 ATP-dependent activity 22.67% (17/75) 3.71 0.0 0.0
GO:0008017 microtubule binding 13.33% (10/75) 5.32 0.0 0.0
GO:0015631 tubulin binding 13.33% (10/75) 5.23 0.0 0.0
GO:0007017 microtubule-based process 13.33% (10/75) 5.09 0.0 0.0
GO:0022857 transmembrane transporter activity 22.67% (17/75) 3.09 0.0 0.0
GO:0042626 ATPase-coupled transmembrane transporter activity 13.33% (10/75) 4.59 0.0 0.0
GO:0008092 cytoskeletal protein binding 13.33% (10/75) 4.48 0.0 0.0
GO:0015399 primary active transmembrane transporter activity 13.33% (10/75) 4.49 0.0 0.0
GO:0003777 microtubule motor activity 9.33% (7/75) 5.91 0.0 0.0
GO:0007018 microtubule-based movement 9.33% (7/75) 5.96 0.0 0.0
GO:0005215 transporter activity 22.67% (17/75) 3.02 0.0 0.0
GO:0010048 vernalization response 5.33% (4/75) 9.35 0.0 0.0
GO:0055085 transmembrane transport 20.0% (15/75) 3.3 0.0 0.0
GO:0140359 ABC-type transporter activity 10.67% (8/75) 5.02 0.0 0.0
GO:0009987 cellular process 50.67% (38/75) 1.46 0.0 0.0
GO:0003774 cytoskeletal motor activity 9.33% (7/75) 5.46 0.0 0.0
GO:0005524 ATP binding 26.67% (20/75) 2.44 0.0 0.0
GO:0035639 purine ribonucleoside triphosphate binding 26.67% (20/75) 2.33 0.0 0.0
GO:0009409 response to cold 5.33% (4/75) 8.06 0.0 0.0
GO:0022804 active transmembrane transporter activity 13.33% (10/75) 3.83 0.0 0.0
GO:0042178 xenobiotic catabolic process 4.0% (3/75) 9.91 0.0 0.0
GO:0006805 xenobiotic metabolic process 4.0% (3/75) 9.91 0.0 0.0
GO:0010124 phenylacetate catabolic process 4.0% (3/75) 9.91 0.0 0.0
GO:0032559 adenyl ribonucleotide binding 26.67% (20/75) 2.08 0.0 0.0
GO:0015440 ABC-type peptide transporter activity 5.33% (4/75) 6.99 0.0 0.0
GO:0015421 ABC-type oligopeptide transporter activity 5.33% (4/75) 6.99 0.0 0.0
GO:0003988 acetyl-CoA C-acyltransferase activity 4.0% (3/75) 8.77 0.0 0.0
GO:0030554 adenyl nucleotide binding 26.67% (20/75) 2.02 0.0 0.0
GO:0032555 purine ribonucleotide binding 26.67% (20/75) 2.0 0.0 0.0
GO:0008150 biological_process 57.33% (43/75) 1.04 0.0 0.0
GO:0032553 ribonucleotide binding 26.67% (20/75) 1.98 0.0 0.0
GO:0097367 carbohydrate derivative binding 26.67% (20/75) 1.97 0.0 1e-06
GO:0006810 transport 20.0% (15/75) 2.43 0.0 1e-06
GO:0017076 purine nucleotide binding 26.67% (20/75) 1.94 0.0 1e-06
GO:0051234 establishment of localization 20.0% (15/75) 2.37 0.0 1e-06
GO:0016408 C-acyltransferase activity 4.0% (3/75) 8.11 0.0 1e-06
GO:0051179 localization 20.0% (15/75) 2.31 0.0 1e-06
GO:1901265 nucleoside phosphate binding 26.67% (20/75) 1.88 0.0 1e-06
GO:0000166 nucleotide binding 26.67% (20/75) 1.88 0.0 1e-06
GO:0043168 anion binding 26.67% (20/75) 1.85 0.0 2e-06
GO:1901363 heterocyclic compound binding 26.67% (20/75) 1.84 0.0 2e-06
GO:0036094 small molecule binding 26.67% (20/75) 1.83 0.0 2e-06
GO:0007098 centrosome cycle 4.0% (3/75) 7.6 1e-06 2e-06
GO:0005880 nuclear microtubule 4.0% (3/75) 7.53 1e-06 3e-06
GO:0031023 microtubule organizing center organization 4.0% (3/75) 7.4 1e-06 3e-06
GO:0009266 response to temperature stimulus 5.33% (4/75) 5.61 2e-06 6e-06
GO:0040029 epigenetic regulation of gene expression 5.33% (4/75) 5.47 2e-06 9e-06
GO:1904680 peptide transmembrane transporter activity 5.33% (4/75) 5.43 3e-06 1e-05
GO:0035673 oligopeptide transmembrane transporter activity 5.33% (4/75) 5.43 3e-06 1e-05
GO:0042537 benzene-containing compound metabolic process 4.0% (3/75) 6.56 5e-06 1.8e-05
GO:0042887 amide transmembrane transporter activity 5.33% (4/75) 4.99 9e-06 3.1e-05
GO:0005813 centrosome 4.0% (3/75) 5.85 2.2e-05 7.4e-05
GO:0006635 fatty acid beta-oxidation 4.0% (3/75) 5.76 2.6e-05 8.7e-05
GO:0019395 fatty acid oxidation 4.0% (3/75) 5.71 2.9e-05 9.5e-05
GO:0005815 microtubule organizing center 4.0% (3/75) 5.67 3.1e-05 0.000102
GO:0051225 spindle assembly 4.0% (3/75) 5.61 3.5e-05 0.000111
GO:0016020 membrane 20.0% (15/75) 1.73 3.5e-05 0.000113
GO:0009062 fatty acid catabolic process 4.0% (3/75) 5.54 4.1e-05 0.000126
GO:0043167 ion binding 26.67% (20/75) 1.37 5.2e-05 0.000157
GO:0047938 glucose-6-phosphate 1-epimerase activity 2.67% (2/75) 7.51 5.8e-05 0.000174
GO:0006338 chromatin remodeling 5.33% (4/75) 4.22 6.8e-05 0.0002
GO:0072329 monocarboxylic acid catabolic process 4.0% (3/75) 5.25 7.4e-05 0.000214
GO:0009628 response to abiotic stimulus 5.33% (4/75) 4.12 9.1e-05 0.000258
GO:0006325 chromatin organization 5.33% (4/75) 4.1 9.5e-05 0.000261
GO:0034440 lipid oxidation 4.0% (3/75) 5.13 9.4e-05 0.000262
GO:0140694 non-membrane-bounded organelle assembly 4.0% (3/75) 5.05 0.000112 0.000304
GO:0007051 spindle organization 4.0% (3/75) 5.0 0.000124 0.000331
GO:0005777 peroxisome 4.0% (3/75) 4.88 0.000158 0.000415
GO:0003674 molecular_function 56.0% (42/75) 0.66 0.000208 0.000539
GO:0071824 protein-DNA complex organization 5.33% (4/75) 3.78 0.000224 0.000573
GO:0016887 ATP hydrolysis activity 6.67% (5/75) 3.13 0.00028 0.000707
GO:0070925 organelle assembly 4.0% (3/75) 4.53 0.00032 0.000795
GO:0005874 microtubule 4.0% (3/75) 4.42 0.000393 0.000965
GO:0042579 microbody 4.0% (3/75) 4.36 0.000451 0.001091
GO:0099512 supramolecular fiber 4.0% (3/75) 4.3 0.000509 0.001183
GO:0099081 supramolecular polymer 4.0% (3/75) 4.3 0.000509 0.001183
GO:0099513 polymeric cytoskeletal fiber 4.0% (3/75) 4.3 0.000505 0.001206
GO:0044242 cellular lipid catabolic process 4.0% (3/75) 4.27 0.000535 0.001227
GO:0030258 lipid modification 4.0% (3/75) 4.23 0.000581 0.001316
GO:0016042 lipid catabolic process 4.0% (3/75) 4.22 0.00059 0.00132
GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives 2.67% (2/75) 5.77 0.000642 0.001419
GO:0110165 cellular anatomical entity 33.33% (25/75) 0.92 0.000797 0.001739
GO:0016854 racemase and epimerase activity 2.67% (2/75) 5.58 0.000842 0.001794
GO:0016043 cellular component organization 10.67% (8/75) 2.01 0.000835 0.001801
GO:0000226 microtubule cytoskeleton organization 4.0% (3/75) 3.95 0.001022 0.002152
GO:0046395 carboxylic acid catabolic process 4.0% (3/75) 3.9 0.001115 0.002293
GO:0016054 organic acid catabolic process 4.0% (3/75) 3.9 0.001115 0.002293
GO:0005515 protein binding 18.67% (14/75) 1.32 0.001245 0.002532
GO:0006631 fatty acid metabolic process 4.0% (3/75) 3.78 0.001428 0.002873
GO:0017111 ribonucleoside triphosphate phosphatase activity 6.67% (5/75) 2.6 0.001486 0.002955
GO:0071840 cellular component organization or biogenesis 10.67% (8/75) 1.85 0.001667 0.003278
GO:0016462 pyrophosphatase activity 6.67% (5/75) 2.5 0.001992 0.003875
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 6.67% (5/75) 2.47 0.002144 0.004126
GO:0099080 supramolecular complex 4.0% (3/75) 3.56 0.00218 0.004152
GO:0007010 cytoskeleton organization 4.0% (3/75) 3.55 0.002238 0.004173
GO:0016817 hydrolase activity, acting on acid anhydrides 6.67% (5/75) 2.46 0.002233 0.004208
GO:0044282 small molecule catabolic process 4.0% (3/75) 3.43 0.002803 0.005172
GO:0097159 organic cyclic compound binding 26.67% (20/75) 0.89 0.003812 0.006963
GO:0005575 cellular_component 33.33% (25/75) 0.74 0.004639 0.008388
GO:0043933 protein-containing complex organization 5.33% (4/75) 2.56 0.004824 0.008636
GO:0005488 binding 36.0% (27/75) 0.67 0.005719 0.010135
GO:0019439 aromatic compound catabolic process 4.0% (3/75) 3.02 0.006261 0.010988
GO:1901361 organic cyclic compound catabolic process 4.0% (3/75) 2.99 0.006565 0.01141
GO:0032787 monocarboxylic acid metabolic process 4.0% (3/75) 2.75 0.010334 0.017786
GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups 4.0% (3/75) 2.58 0.014157 0.024134
GO:0022402 cell cycle process 4.0% (3/75) 2.43 0.018444 0.031146
GO:0022607 cellular component assembly 4.0% (3/75) 2.31 0.022886 0.038286
GO:0052793 pectin acetylesterase activity 1.33% (1/75) 5.34 0.024414 0.040464
GO:0005975 carbohydrate metabolic process 5.33% (4/75) 1.83 0.026251 0.04311
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (75) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms