Coexpression cluster: Cluster_5986 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity 66.67% (2/3) 13.91 0.0 0.0
GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway 66.67% (2/3) 12.71 0.0 1e-06
GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor 66.67% (2/3) 12.88 0.0 1e-06
GO:0019682 glyceraldehyde-3-phosphate metabolic process 66.67% (2/3) 11.61 0.0 1e-06
GO:0009240 isopentenyl diphosphate biosynthetic process 66.67% (2/3) 11.67 0.0 1e-06
GO:0046490 isopentenyl diphosphate metabolic process 66.67% (2/3) 11.67 0.0 1e-06
GO:0016725 oxidoreductase activity, acting on CH or CH2 groups 66.67% (2/3) 11.71 0.0 2e-06
GO:0006081 cellular aldehyde metabolic process 66.67% (2/3) 9.56 2e-06 1.6e-05
GO:0016114 terpenoid biosynthetic process 66.67% (2/3) 8.6 9e-06 5.3e-05
GO:0006721 terpenoid metabolic process 66.67% (2/3) 8.37 1.2e-05 6.6e-05
GO:0008299 isoprenoid biosynthetic process 66.67% (2/3) 8.28 1.4e-05 6.8e-05
GO:0006090 pyruvate metabolic process 66.67% (2/3) 8.21 1.5e-05 6.9e-05
GO:0008654 phospholipid biosynthetic process 66.67% (2/3) 7.97 2.1e-05 8.8e-05
GO:0006720 isoprenoid metabolic process 66.67% (2/3) 7.82 2.6e-05 0.0001
GO:0006644 phospholipid metabolic process 66.67% (2/3) 7.18 6.4e-05 0.000229
GO:0009536 plastid 66.67% (2/3) 6.74 0.000116 0.000329
GO:0090407 organophosphate biosynthetic process 66.67% (2/3) 6.77 0.000111 0.000333
GO:0009507 chloroplast 66.67% (2/3) 6.78 0.00011 0.000348
GO:0032787 monocarboxylic acid metabolic process 66.67% (2/3) 6.81 0.000106 0.000357
GO:0008610 lipid biosynthetic process 66.67% (2/3) 6.3 0.000213 0.000575
GO:1901135 carbohydrate derivative metabolic process 66.67% (2/3) 6.25 0.000229 0.000588
GO:0019637 organophosphate metabolic process 66.67% (2/3) 5.87 0.000385 0.000944
GO:0044255 cellular lipid metabolic process 66.67% (2/3) 5.72 0.000479 0.001124
GO:0006082 organic acid metabolic process 66.67% (2/3) 5.51 0.000634 0.001317
GO:0043436 oxoacid metabolic process 66.67% (2/3) 5.51 0.000633 0.001368
GO:0019752 carboxylic acid metabolic process 66.67% (2/3) 5.52 0.00063 0.001416
GO:0006629 lipid metabolic process 66.67% (2/3) 5.3 0.00085 0.001699
GO:0044281 small molecule metabolic process 66.67% (2/3) 4.81 0.001667 0.003214
GO:0016491 oxidoreductase activity 66.67% (2/3) 4.58 0.002299 0.004281
GO:0044249 cellular biosynthetic process 66.67% (2/3) 4.47 0.002668 0.004803
GO:1901576 organic substance biosynthetic process 66.67% (2/3) 4.35 0.003151 0.005488
GO:0009058 biosynthetic process 66.67% (2/3) 4.27 0.003491 0.005891
GO:0006793 phosphorus metabolic process 66.67% (2/3) 3.89 0.005913 0.009392
GO:0006796 phosphate-containing compound metabolic process 66.67% (2/3) 3.89 0.005846 0.009567
GO:0043227 membrane-bounded organelle 66.67% (2/3) 3.24 0.014275 0.021412
GO:0043231 intracellular membrane-bounded organelle 66.67% (2/3) 3.25 0.014067 0.021703
GO:0043226 organelle 66.67% (2/3) 3.03 0.018868 0.026813
GO:0043229 intracellular organelle 66.67% (2/3) 3.03 0.018865 0.027532
GO:0005506 iron ion binding 33.33% (1/3) 5.44 0.022838 0.031622
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (3) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms