Coexpression cluster: Cluster_183 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups 19.74% (15/76) 4.88 0.0 0.0
GO:0016746 acyltransferase activity 19.74% (15/76) 4.03 0.0 0.0
GO:0000254 C-4 methylsterol oxidase activity 6.58% (5/76) 8.31 0.0 0.0
GO:0016716 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen 6.58% (5/76) 8.31 0.0 0.0
GO:0008610 lipid biosynthetic process 14.47% (11/76) 4.1 0.0 0.0
GO:0004497 monooxygenase activity 13.16% (10/76) 4.12 0.0 0.0
GO:0016126 sterol biosynthetic process 6.58% (5/76) 7.01 0.0 0.0
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 13.16% (10/76) 3.97 0.0 0.0
GO:0006633 fatty acid biosynthetic process 7.89% (6/76) 5.82 0.0 0.0
GO:0072330 monocarboxylic acid biosynthetic process 7.89% (6/76) 5.53 0.0 0.0
GO:0006629 lipid metabolic process 15.79% (12/76) 3.22 0.0 0.0
GO:0005506 iron ion binding 11.84% (9/76) 3.95 0.0 0.0
GO:0003824 catalytic activity 46.05% (35/76) 1.35 0.0 0.0
GO:0006694 steroid biosynthetic process 6.58% (5/76) 5.95 0.0 0.0
GO:0016125 sterol metabolic process 6.58% (5/76) 5.84 0.0 0.0
GO:0046914 transition metal ion binding 15.79% (12/76) 2.91 0.0 1e-06
GO:0006631 fatty acid metabolic process 7.89% (6/76) 4.76 0.0 1e-06
GO:0008202 steroid metabolic process 6.58% (5/76) 5.44 0.0 1e-06
GO:0016491 oxidoreductase activity 17.11% (13/76) 2.61 0.0 2e-06
GO:1901617 organic hydroxy compound biosynthetic process 6.58% (5/76) 5.15 0.0 3e-06
GO:0005789 endoplasmic reticulum membrane 6.58% (5/76) 4.85 1e-06 8e-06
GO:0046872 metal ion binding 15.79% (12/76) 2.37 3e-06 2.4e-05
GO:0016053 organic acid biosynthetic process 7.89% (6/76) 3.92 3e-06 2.4e-05
GO:0046394 carboxylic acid biosynthetic process 7.89% (6/76) 3.92 3e-06 2.4e-05
GO:0043169 cation binding 15.79% (12/76) 2.33 4e-06 3e-05
GO:0032787 monocarboxylic acid metabolic process 7.89% (6/76) 3.73 7e-06 4.4e-05
GO:1901576 organic substance biosynthetic process 15.79% (12/76) 2.27 7e-06 4.5e-05
GO:1901615 organic hydroxy compound metabolic process 6.58% (5/76) 4.14 1.1e-05 6.6e-05
GO:0009058 biosynthetic process 15.79% (12/76) 2.19 1.1e-05 6.8e-05
GO:2000280 regulation of root development 2.63% (2/76) 8.56 1.4e-05 7.9e-05
GO:0010497 plasmodesmata-mediated intercellular transport 2.63% (2/76) 8.09 2.6e-05 0.000147
GO:0044283 small molecule biosynthetic process 7.89% (6/76) 3.36 2.8e-05 0.000155
GO:0016020 membrane 19.74% (15/76) 1.71 4.1e-05 0.00022
GO:0010496 intercellular transport 2.63% (2/76) 7.61 5.1e-05 0.000262
GO:0020037 heme binding 7.89% (6/76) 3.17 5.8e-05 0.000289
GO:0046906 tetrapyrrole binding 7.89% (6/76) 3.16 6e-05 0.000292
GO:0003674 molecular_function 56.58% (43/76) 0.68 0.000128 0.000605
GO:0016740 transferase activity 21.05% (16/76) 1.44 0.000203 0.000936
GO:0044255 cellular lipid metabolic process 7.89% (6/76) 2.64 0.000426 0.001912
GO:1901362 organic cyclic compound biosynthetic process 7.89% (6/76) 2.62 0.00045 0.001969
GO:0030145 manganese ion binding 2.63% (2/76) 5.97 0.000489 0.002087
GO:0006082 organic acid metabolic process 7.89% (6/76) 2.43 0.000887 0.003527
GO:0043436 oxoacid metabolic process 7.89% (6/76) 2.44 0.000883 0.003594
GO:0019752 carboxylic acid metabolic process 7.89% (6/76) 2.44 0.00087 0.003626
GO:0031090 organelle membrane 6.58% (5/76) 2.69 0.001112 0.004325
GO:0044281 small molecule metabolic process 9.21% (7/76) 1.95 0.002231 0.008489
GO:0050793 regulation of developmental process 2.63% (2/76) 4.72 0.00271 0.010089
GO:0016413 O-acetyltransferase activity 2.63% (2/76) 4.61 0.003129 0.011408
GO:0036374 glutathione hydrolase activity 1.32% (1/76) 7.86 0.004291 0.015326
GO:0010074 maintenance of meristem identity 1.32% (1/76) 7.59 0.005172 0.016164
GO:0010078 maintenance of root meristem identity 1.32% (1/76) 7.59 0.005172 0.016164
GO:0019827 stem cell population maintenance 1.32% (1/76) 7.59 0.005172 0.016164
GO:0090421 embryonic meristem initiation 1.32% (1/76) 7.59 0.005172 0.016164
GO:0010071 root meristem specification 1.32% (1/76) 7.59 0.005172 0.016164
GO:0098727 maintenance of cell number 1.32% (1/76) 7.59 0.005172 0.016164
GO:0010492 maintenance of shoot apical meristem identity 1.32% (1/76) 7.59 0.005172 0.016164
GO:0010014 meristem initiation 1.32% (1/76) 7.28 0.00643 0.019741
GO:0006751 glutathione catabolic process 1.32% (1/76) 7.12 0.007184 0.021675
GO:0044249 cellular biosynthetic process 9.21% (7/76) 1.61 0.008033 0.022314
GO:0070161 anchoring junction 2.63% (2/76) 3.93 0.007834 0.022476
GO:0030054 cell junction 2.63% (2/76) 3.91 0.007965 0.022482
GO:0005911 cell-cell junction 2.63% (2/76) 3.93 0.007748 0.022599
GO:0009506 plasmodesma 2.63% (2/76) 3.94 0.007676 0.022769
GO:0008356 asymmetric cell division 1.32% (1/76) 6.8 0.00894 0.024446
GO:0070003 threonine-type peptidase activity 1.32% (1/76) 6.74 0.009316 0.025082
GO:0110165 cellular anatomical entity 28.95% (22/76) 0.71 0.010594 0.02809
GO:0005618 cell wall 2.63% (2/76) 3.61 0.011848 0.03005
GO:0008242 omega peptidase activity 1.32% (1/76) 6.39 0.01182 0.030418
GO:0016407 acetyltransferase activity 2.63% (2/76) 3.62 0.011779 0.030766
GO:0016788 hydrolase activity, acting on ester bonds 6.58% (5/76) 1.85 0.012801 0.031553
GO:0030312 external encapsulating structure 2.63% (2/76) 3.57 0.012624 0.031561
GO:0008374 O-acyltransferase activity 2.63% (2/76) 3.43 0.015042 0.036561
GO:0035336 long-chain fatty-acyl-CoA metabolic process 1.32% (1/76) 5.98 0.015687 0.036603
GO:0010345 suberin biosynthetic process 1.32% (1/76) 5.99 0.015563 0.036803
GO:0080019 alcohol-forming very long-chain fatty acyl-CoA reductase activity 1.32% (1/76) 5.99 0.015563 0.036803
GO:0035337 fatty-acyl-CoA metabolic process 1.32% (1/76) 5.88 0.016807 0.038701
GO:0051301 cell division 1.32% (1/76) 5.51 0.021646 0.049196
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (76) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms