Coexpression cluster: Cluster_787 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006658 phosphatidylserine metabolic process 6.45% (6/93) 9.92 0.0 0.0
GO:0106245 L-serine-phosphatidylethanolamine phosphatidyltransferase activity 6.45% (6/93) 9.96 0.0 0.0
GO:0006659 phosphatidylserine biosynthetic process 6.45% (6/93) 9.96 0.0 0.0
GO:0042398 cellular modified amino acid biosynthetic process 6.45% (6/93) 7.21 0.0 0.0
GO:0016780 phosphotransferase activity, for other substituted phosphate groups 6.45% (6/93) 6.82 0.0 0.0
GO:0006575 cellular modified amino acid metabolic process 6.45% (6/93) 6.25 0.0 0.0
GO:0046474 glycerophospholipid biosynthetic process 6.45% (6/93) 4.98 0.0 3e-06
GO:0045017 glycerolipid biosynthetic process 6.45% (6/93) 4.76 0.0 6e-06
GO:0008654 phospholipid biosynthetic process 6.45% (6/93) 4.6 0.0 1e-05
GO:0006650 glycerophospholipid metabolic process 6.45% (6/93) 4.41 0.0 2e-05
GO:0046486 glycerolipid metabolic process 6.45% (6/93) 4.2 1e-06 4.2e-05
GO:0016740 transferase activity 23.66% (22/93) 1.61 2e-06 6.9e-05
GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity 2.15% (2/93) 9.75 2e-06 7.6e-05
GO:0006044 N-acetylglucosamine metabolic process 2.15% (2/93) 9.75 2e-06 7.6e-05
GO:0006644 phospholipid metabolic process 6.45% (6/93) 3.81 5e-06 0.000148
GO:1901564 organonitrogen compound metabolic process 23.66% (22/93) 1.51 6e-06 0.000155
GO:0090407 organophosphate biosynthetic process 6.45% (6/93) 3.4 2.5e-05 0.000623
GO:0016772 transferase activity, transferring phosphorus-containing groups 15.05% (14/93) 1.84 3.6e-05 0.000848
GO:0006796 phosphate-containing compound metabolic process 15.05% (14/93) 1.75 6.9e-05 0.001555
GO:0006793 phosphorus metabolic process 15.05% (14/93) 1.74 7.3e-05 0.00157
GO:0008610 lipid biosynthetic process 6.45% (6/93) 2.93 0.000148 0.003025
GO:0044255 cellular lipid metabolic process 7.53% (7/93) 2.57 0.000193 0.003764
GO:0044238 primary metabolic process 29.03% (27/93) 1.01 0.000207 0.00386
GO:0019538 protein metabolic process 17.2% (16/93) 1.41 0.00031 0.005543
GO:1901071 glucosamine-containing compound metabolic process 2.15% (2/93) 6.27 0.000327 0.005609
GO:0140103 catalytic activity, acting on a glycoprotein 2.15% (2/93) 6.17 0.000371 0.005891
GO:0008353 RNA polymerase II CTD heptapeptide repeat kinase activity 2.15% (2/93) 6.2 0.000359 0.005916
GO:0034243 regulation of transcription elongation by RNA polymerase II 2.15% (2/93) 5.84 0.000584 0.007826
GO:0006807 nitrogen compound metabolic process 24.73% (23/93) 1.04 0.000566 0.007828
GO:0071704 organic substance metabolic process 29.03% (27/93) 0.93 0.000553 0.007905
GO:0032968 positive regulation of transcription elongation by RNA polymerase II 2.15% (2/93) 5.9 0.000543 0.008038
GO:0008375 acetylglucosaminyltransferase activity 2.15% (2/93) 5.9 0.000543 0.008038
GO:0140096 catalytic activity, acting on a protein 15.05% (14/93) 1.42 0.000717 0.008542
GO:0019637 organophosphate metabolic process 6.45% (6/93) 2.5 0.000706 0.008656
GO:0036211 protein modification process 13.98% (13/93) 1.49 0.000693 0.008744
GO:0005794 Golgi apparatus 4.3% (4/93) 3.35 0.000677 0.008806
GO:0070816 obsolete phosphorylation of RNA polymerase II C-terminal domain 2.15% (2/93) 5.64 0.000771 0.008944
GO:0006040 amino sugar metabolic process 2.15% (2/93) 5.53 0.0009 0.010159
GO:0035102 PRC1 complex 1.08% (1/93) 10.07 0.000928 0.01021
GO:0140994 RNA polymerase II CTD heptapeptide repeat modifying activity 2.15% (2/93) 5.47 0.000971 0.010414
GO:0006629 lipid metabolic process 7.53% (7/93) 2.15 0.001058 0.011073
GO:1901566 organonitrogen compound biosynthetic process 6.45% (6/93) 2.38 0.001113 0.011367
GO:0000152 nuclear ubiquitin ligase complex 2.15% (2/93) 5.33 0.001178 0.011489
GO:0008152 metabolic process 29.03% (27/93) 0.86 0.00117 0.011676
GO:0043413 macromolecule glycosylation 3.23% (3/93) 3.84 0.001263 0.011776
GO:0006486 protein glycosylation 3.23% (3/93) 3.84 0.001263 0.011776
GO:0032786 positive regulation of DNA-templated transcription, elongation 2.15% (2/93) 5.23 0.001358 0.012397
GO:0070085 glycosylation 3.23% (3/93) 3.75 0.001517 0.013561
GO:0032784 regulation of DNA-templated transcription elongation 2.15% (2/93) 4.94 0.002018 0.017663
GO:0015297 antiporter activity 3.23% (3/93) 3.59 0.002096 0.017984
GO:0043412 macromolecule modification 13.98% (13/93) 1.31 0.002161 0.018179
GO:0008150 biological_process 41.94% (39/93) 0.59 0.002371 0.019195
GO:0065007 biological regulation 13.98% (13/93) 1.3 0.002329 0.019212
GO:0035098 ESC/E(Z) complex 1.08% (1/93) 8.66 0.002473 0.019649
GO:0006487 protein N-linked glycosylation 2.15% (2/93) 4.73 0.00267 0.020828
GO:0000307 cyclin-dependent protein kinase holoenzyme complex 2.15% (2/93) 4.6 0.003184 0.024394
GO:0003824 catalytic activity 30.11% (28/93) 0.73 0.003321 0.024997
GO:0050789 regulation of biological process 12.9% (12/93) 1.28 0.003712 0.027455
GO:0015291 secondary active transmembrane transporter activity 3.23% (3/93) 3.23 0.004222 0.0307
GO:0043085 positive regulation of catalytic activity 2.15% (2/93) 4.37 0.004353 0.031124
GO:0015786 UDP-glucose transmembrane transport 1.08% (1/93) 7.8 0.004478 0.031496
GO:0044093 positive regulation of molecular function 2.15% (2/93) 4.27 0.004994 0.034553
GO:0016757 glycosyltransferase activity 5.38% (5/93) 2.17 0.005239 0.035678
GO:0043231 intracellular membrane-bounded organelle 15.05% (14/93) 1.1 0.00534 0.035797
GO:0006897 endocytosis 2.15% (2/93) 4.16 0.005767 0.037485
GO:0043227 membrane-bounded organelle 15.05% (14/93) 1.09 0.005699 0.037613
GO:0010105 negative regulation of ethylene-activated signaling pathway 1.08% (1/93) 7.2 0.006787 0.039347
GO:0070298 negative regulation of phosphorelay signal transduction system 1.08% (1/93) 7.2 0.006787 0.039347
GO:0033539 fatty acid beta-oxidation using acyl-CoA dehydrogenase 1.08% (1/93) 7.2 0.006787 0.039347
GO:1902554 serine/threonine protein kinase complex 2.15% (2/93) 4.02 0.006905 0.039497
GO:1902911 protein kinase complex 2.15% (2/93) 3.99 0.007191 0.039553
GO:0016758 hexosyltransferase activity 4.3% (4/93) 2.47 0.006199 0.039691
GO:0031519 PcG protein complex 1.08% (1/93) 7.3 0.006326 0.039908
GO:0050794 regulation of cellular process 11.83% (11/93) 1.23 0.007175 0.039974
GO:0016192 vesicle-mediated transport 4.3% (4/93) 2.39 0.007369 0.040014
GO:0044249 cellular biosynthetic process 8.6% (8/93) 1.51 0.007144 0.040328
GO:0023051 regulation of signaling 2.15% (2/93) 4.04 0.006723 0.04062
GO:0010646 regulation of cell communication 2.15% (2/93) 4.04 0.006706 0.041099
GO:0009966 regulation of signal transduction 2.15% (2/93) 4.05 0.006624 0.041184
GO:0006468 protein phosphorylation 8.6% (8/93) 1.49 0.00795 0.042631
GO:0097027 ubiquitin-protein transferase activator activity 1.08% (1/93) 6.53 0.010776 0.048663
GO:1905786 positive regulation of anaphase-promoting complex-dependent catabolic process 1.08% (1/93) 6.53 0.010776 0.048663
GO:1903322 positive regulation of protein modification by small protein conjugation or removal 1.08% (1/93) 6.53 0.010776 0.048663
GO:0031398 positive regulation of protein ubiquitination 1.08% (1/93) 6.53 0.010776 0.048663
GO:1904668 positive regulation of ubiquitin protein ligase activity 1.08% (1/93) 6.53 0.010776 0.048663
GO:1905784 regulation of anaphase-promoting complex-dependent catabolic process 1.08% (1/93) 6.53 0.010776 0.048663
GO:1990757 ubiquitin ligase activator activity 1.08% (1/93) 6.53 0.010776 0.048663
GO:0051443 positive regulation of ubiquitin-protein transferase activity 1.08% (1/93) 6.53 0.010776 0.048663
GO:0043170 macromolecule metabolic process 19.35% (18/93) 0.83 0.010959 0.048971
GO:0070297 regulation of phosphorelay signal transduction system 1.08% (1/93) 6.68 0.009704 0.048975
GO:0010104 regulation of ethylene-activated signaling pathway 1.08% (1/93) 6.68 0.009704 0.048975
GO:1990234 transferase complex 4.3% (4/93) 2.21 0.011245 0.049225
GO:0010997 anaphase-promoting complex binding 1.08% (1/93) 6.47 0.011235 0.049691
GO:1901576 organic substance biosynthetic process 8.6% (8/93) 1.39 0.011482 0.049758
GO:0098657 import into cell 2.15% (2/93) 3.78 0.009536 0.049889
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (93) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms