Coexpression cluster: Cluster_325 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0098800 inner mitochondrial membrane protein complex 9.86% (7/71) 6.42 0.0 0.0
GO:0016675 oxidoreductase activity, acting on a heme group of donors 5.63% (4/71) 9.49 0.0 0.0
GO:0004129 cytochrome-c oxidase activity 5.63% (4/71) 9.49 0.0 0.0
GO:0015453 oxidoreduction-driven active transmembrane transporter activity 7.04% (5/71) 8.01 0.0 0.0
GO:0098798 mitochondrial protein-containing complex 9.86% (7/71) 5.77 0.0 0.0
GO:0009060 aerobic respiration 7.04% (5/71) 6.89 0.0 0.0
GO:0045333 cellular respiration 7.04% (5/71) 6.85 0.0 0.0
GO:0098803 respiratory chain complex 7.04% (5/71) 6.91 0.0 0.0
GO:0009142 nucleoside triphosphate biosynthetic process 7.04% (5/71) 6.63 0.0 0.0
GO:0009201 ribonucleoside triphosphate biosynthetic process 7.04% (5/71) 6.65 0.0 0.0
GO:0015980 energy derivation by oxidation of organic compounds 7.04% (5/71) 6.27 0.0 0.0
GO:0015078 proton transmembrane transporter activity 8.45% (6/71) 5.35 0.0 0.0
GO:0009055 electron transfer activity 7.04% (5/71) 6.07 0.0 0.0
GO:0005751 mitochondrial respiratory chain complex IV 4.23% (3/71) 9.24 0.0 0.0
GO:0045277 respiratory chain complex IV 4.23% (3/71) 8.77 0.0 1e-06
GO:0006123 mitochondrial electron transport, cytochrome c to oxygen 4.23% (3/71) 8.73 0.0 1e-06
GO:0015990 electron transport coupled proton transport 4.23% (3/71) 8.4 0.0 2e-06
GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient 4.23% (3/71) 8.4 0.0 2e-06
GO:0006091 generation of precursor metabolites and energy 8.45% (6/71) 4.47 0.0 6e-06
GO:0070069 cytochrome complex 4.23% (3/71) 7.84 0.0 6e-06
GO:0009260 ribonucleotide biosynthetic process 7.04% (5/71) 5.1 0.0 6e-06
GO:0046390 ribose phosphate biosynthetic process 7.04% (5/71) 5.04 1e-06 7e-06
GO:0009199 ribonucleoside triphosphate metabolic process 7.04% (5/71) 4.97 1e-06 8e-06
GO:0016491 oxidoreductase activity 16.9% (12/71) 2.6 1e-06 8e-06
GO:0009141 nucleoside triphosphate metabolic process 7.04% (5/71) 4.93 1e-06 9e-06
GO:0098796 membrane protein complex 9.86% (7/71) 3.82 1e-06 9e-06
GO:0022900 electron transport chain 5.63% (4/71) 5.65 1e-06 1.6e-05
GO:0015075 monoatomic ion transmembrane transporter activity 9.86% (7/71) 3.68 1e-06 1.6e-05
GO:0009165 nucleotide biosynthetic process 7.04% (5/71) 4.64 2e-06 2.1e-05
GO:1901293 nucleoside phosphate biosynthetic process 7.04% (5/71) 4.64 2e-06 2.1e-05
GO:0003883 CTP synthase activity 4.23% (3/71) 6.94 2e-06 2.3e-05
GO:0003954 NADH dehydrogenase activity 4.23% (3/71) 6.85 3e-06 2.6e-05
GO:0006241 CTP biosynthetic process 4.23% (3/71) 6.76 3e-06 2.8e-05
GO:0046036 CTP metabolic process 4.23% (3/71) 6.76 3e-06 2.8e-05
GO:0009208 pyrimidine ribonucleoside triphosphate metabolic process 4.23% (3/71) 6.76 3e-06 2.8e-05
GO:0009209 pyrimidine ribonucleoside triphosphate biosynthetic process 4.23% (3/71) 6.76 3e-06 2.8e-05
GO:0009148 pyrimidine nucleoside triphosphate biosynthetic process 4.23% (3/71) 6.73 4e-06 2.9e-05
GO:0022890 inorganic cation transmembrane transporter activity 8.45% (6/71) 3.88 4e-06 2.9e-05
GO:0009147 pyrimidine nucleoside triphosphate metabolic process 4.23% (3/71) 6.71 4e-06 2.9e-05
GO:0019646 aerobic electron transport chain 4.23% (3/71) 6.78 3e-06 3e-05
GO:0042802 identical protein binding 4.23% (3/71) 6.65 4e-06 3.1e-05
GO:0019856 pyrimidine nucleobase biosynthetic process 4.23% (3/71) 6.42 7e-06 4.8e-05
GO:0008324 monoatomic cation transmembrane transporter activity 8.45% (6/71) 3.74 7e-06 4.8e-05
GO:0045259 proton-transporting ATP synthase complex 2.82% (2/71) 8.92 8e-06 5.6e-05
GO:0005753 mitochondrial proton-transporting ATP synthase complex 2.82% (2/71) 8.92 8e-06 5.6e-05
GO:0022904 respiratory electron transport chain 4.23% (3/71) 6.27 9e-06 6.1e-05
GO:0006206 pyrimidine nucleobase metabolic process 4.23% (3/71) 6.23 1e-05 6.5e-05
GO:0015318 inorganic molecular entity transmembrane transporter activity 8.45% (6/71) 3.57 1.2e-05 7.9e-05
GO:0009218 pyrimidine ribonucleotide metabolic process 4.23% (3/71) 6.08 1.3e-05 8.3e-05
GO:0009220 pyrimidine ribonucleotide biosynthetic process 4.23% (3/71) 6.08 1.3e-05 8.4e-05
GO:0046112 nucleobase biosynthetic process 4.23% (3/71) 6.04 1.5e-05 8.9e-05
GO:0009259 ribonucleotide metabolic process 7.04% (5/71) 4.02 1.6e-05 9.5e-05
GO:0019693 ribose phosphate metabolic process 7.04% (5/71) 3.96 1.9e-05 0.000113
GO:1901137 carbohydrate derivative biosynthetic process 7.04% (5/71) 3.94 2e-05 0.000116
GO:0006220 pyrimidine nucleotide metabolic process 4.23% (3/71) 5.83 2.2e-05 0.000124
GO:0006221 pyrimidine nucleotide biosynthetic process 4.23% (3/71) 5.83 2.2e-05 0.000125
GO:1901566 organonitrogen compound biosynthetic process 9.86% (7/71) 2.99 3e-05 0.000164
GO:0009112 nucleobase metabolic process 4.23% (3/71) 5.67 3.1e-05 0.000166
GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) 2.82% (2/71) 7.82 3.8e-05 0.0002
GO:0022853 active monoatomic ion transmembrane transporter activity 5.63% (4/71) 4.44 3.9e-05 0.0002
GO:0072528 pyrimidine-containing compound biosynthetic process 4.23% (3/71) 5.46 4.8e-05 0.000242
GO:0072527 pyrimidine-containing compound metabolic process 4.23% (3/71) 5.34 6.1e-05 0.000306
GO:0009117 nucleotide metabolic process 7.04% (5/71) 3.59 6.4e-05 0.000314
GO:0015399 primary active transmembrane transporter activity 7.04% (5/71) 3.57 6.8e-05 0.000321
GO:0016469 proton-transporting two-sector ATPase complex 2.82% (2/71) 7.4 6.8e-05 0.000322
GO:0006753 nucleoside phosphate metabolic process 7.04% (5/71) 3.58 6.7e-05 0.000324
GO:0090407 organophosphate biosynthetic process 7.04% (5/71) 3.53 7.8e-05 0.000361
GO:0044271 cellular nitrogen compound biosynthetic process 9.86% (7/71) 2.7 0.000107 0.000486
GO:0016874 ligase activity 7.04% (5/71) 3.43 0.00011 0.000494
GO:0016651 oxidoreductase activity, acting on NAD(P)H 4.23% (3/71) 5.04 0.000113 0.000499
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism 2.82% (2/71) 6.95 0.000127 0.000546
GO:0015252 proton channel activity 2.82% (2/71) 6.95 0.000127 0.000546
GO:0055086 nucleobase-containing small molecule metabolic process 7.04% (5/71) 3.37 0.000132 0.000562
GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain 2.82% (2/71) 6.87 0.000142 0.000595
GO:0004030 aldehyde dehydrogenase [NAD(P)+] activity 2.82% (2/71) 6.77 0.000162 0.000654
GO:0004029 aldehyde dehydrogenase (NAD+) activity 2.82% (2/71) 6.77 0.000162 0.000654
GO:0005747 mitochondrial respiratory chain complex I 2.82% (2/71) 6.78 0.00016 0.000662
GO:1902494 catalytic complex 9.86% (7/71) 2.59 0.000169 0.000664
GO:1902600 proton transmembrane transport 4.23% (3/71) 4.85 0.000168 0.000667
GO:0015986 proton motive force-driven ATP synthesis 2.82% (2/71) 6.65 0.000191 0.00073
GO:0006754 ATP biosynthetic process 2.82% (2/71) 6.65 0.000191 0.00073
GO:0045271 respiratory chain complex I 2.82% (2/71) 6.48 0.000241 0.000911
GO:0030964 NADH dehydrogenase complex 2.82% (2/71) 6.4 0.000272 0.001018
GO:0009145 purine nucleoside triphosphate biosynthetic process 2.82% (2/71) 6.2 0.000356 0.001299
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 2.82% (2/71) 6.2 0.000356 0.001299
GO:0034654 nucleobase-containing compound biosynthetic process 7.04% (5/71) 3.04 0.000374 0.00135
GO:1901135 carbohydrate derivative metabolic process 7.04% (5/71) 3.01 0.000414 0.001476
GO:0002181 cytoplasmic translation 2.82% (2/71) 6.01 0.000465 0.001637
GO:0016879 ligase activity, forming carbon-nitrogen bonds 4.23% (3/71) 4.33 0.000478 0.001665
GO:0044391 ribosomal subunit 4.23% (3/71) 4.27 0.000535 0.001842
GO:0022804 active transmembrane transporter activity 7.04% (5/71) 2.91 0.000563 0.001916
GO:0022857 transmembrane transporter activity 11.27% (8/71) 2.08 0.000599 0.002019
GO:0005216 monoatomic ion channel activity 4.23% (3/71) 4.2 0.000613 0.002045
GO:0008824 cyanate hydratase activity 1.41% (1/71) 10.46 0.000709 0.002337
GO:1902495 transmembrane transporter complex 2.82% (2/71) 5.61 0.0008 0.002611
GO:0005215 transporter activity 11.27% (8/71) 2.01 0.000816 0.002636
GO:0009439 cyanate metabolic process 1.41% (1/71) 10.24 0.000827 0.002642
GO:0006811 monoatomic ion transport 5.63% (4/71) 3.16 0.001103 0.003489
GO:0018130 heterocycle biosynthetic process 7.04% (5/71) 2.68 0.001144 0.003583
GO:0003735 structural constituent of ribosome 4.23% (3/71) 3.86 0.001202 0.003726
GO:1990351 transporter complex 2.82% (2/71) 5.28 0.001263 0.003875
GO:0015267 channel activity 4.23% (3/71) 3.83 0.001292 0.00389
GO:0022803 passive transmembrane transporter activity 4.23% (3/71) 3.83 0.001292 0.00389
GO:0019637 organophosphate metabolic process 7.04% (5/71) 2.63 0.001325 0.003912
GO:1904949 ATPase complex 2.82% (2/71) 5.25 0.001314 0.003918
GO:0019438 aromatic compound biosynthetic process 7.04% (5/71) 2.61 0.001427 0.004174
GO:0044281 small molecule metabolic process 9.86% (7/71) 2.05 0.001504 0.004357
GO:0032991 protein-containing complex 14.08% (10/71) 1.61 0.001567 0.004498
GO:1901362 organic cyclic compound biosynthetic process 7.04% (5/71) 2.46 0.002234 0.006353
GO:0005261 monoatomic cation channel activity 2.82% (2/71) 4.85 0.002264 0.006379
GO:0098655 monoatomic cation transmembrane transport 4.23% (3/71) 3.51 0.002411 0.006732
GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor 2.82% (2/71) 4.77 0.002535 0.007017
GO:0098662 inorganic cation transmembrane transport 4.23% (3/71) 3.46 0.002681 0.007356
GO:0034220 monoatomic ion transmembrane transport 4.23% (3/71) 3.45 0.00273 0.007425
GO:0022625 cytosolic large ribosomal subunit 2.82% (2/71) 4.71 0.002755 0.007425
GO:0098660 inorganic ion transmembrane transport 4.23% (3/71) 3.35 0.003274 0.008749
GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors 2.82% (2/71) 4.51 0.003576 0.009394
GO:0020037 heme binding 5.63% (4/71) 2.69 0.003564 0.009443
GO:0046906 tetrapyrrole binding 5.63% (4/71) 2.68 0.003651 0.009511
GO:0015934 large ribosomal subunit 2.82% (2/71) 4.42 0.004049 0.01046
GO:1990204 oxidoreductase complex 2.82% (2/71) 4.39 0.004189 0.010733
GO:0005198 structural molecule activity 4.23% (3/71) 3.15 0.004884 0.01241
GO:0009152 purine ribonucleotide biosynthetic process 2.82% (2/71) 4.24 0.005155 0.012991
GO:0044249 cellular biosynthetic process 9.86% (7/71) 1.71 0.00556 0.013899
GO:0044237 cellular metabolic process 22.54% (16/71) 0.94 0.007278 0.017906
GO:0006812 monoatomic cation transport 4.23% (3/71) 2.94 0.00724 0.017956
GO:0046034 ATP metabolic process 2.82% (2/71) 3.95 0.007585 0.018514
GO:0004096 catalase activity 1.41% (1/71) 7.02 0.007651 0.01853
GO:0009205 purine ribonucleoside triphosphate metabolic process 2.82% (2/71) 3.87 0.008429 0.020099
GO:0006164 purine nucleotide biosynthetic process 2.82% (2/71) 3.87 0.008387 0.020154
GO:1901576 organic substance biosynthetic process 9.86% (7/71) 1.59 0.008642 0.020295
GO:0009144 purine nucleoside triphosphate metabolic process 2.82% (2/71) 3.85 0.008625 0.02041
GO:0072522 purine-containing compound biosynthetic process 2.82% (2/71) 3.76 0.00971 0.022633
GO:0009058 biosynthetic process 9.86% (7/71) 1.51 0.011277 0.026087
GO:0008137 NADH dehydrogenase (ubiquinone) activity 1.41% (1/71) 6.43 0.011513 0.026244
GO:0050136 NADH dehydrogenase (quinone) activity 1.41% (1/71) 6.43 0.011513 0.026244
GO:0005840 ribosome 2.82% (2/71) 3.51 0.013633 0.030849
GO:0018455 alcohol dehydrogenase [NAD(P)+] activity 1.41% (1/71) 5.94 0.016175 0.036074
GO:0004022 alcohol dehydrogenase (NAD+) activity 1.41% (1/71) 5.94 0.016175 0.036074
GO:0003955 NAD(P)H dehydrogenase (quinone) activity 1.41% (1/71) 5.77 0.01815 0.040189
GO:0009909 regulation of flower development 1.41% (1/71) 5.59 0.020584 0.044937
GO:0048831 regulation of shoot system development 1.41% (1/71) 5.59 0.020584 0.044937
GO:0006412 translation 2.82% (2/71) 3.1 0.023031 0.049582
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor 1.41% (1/71) 5.43 0.022896 0.049635
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (71) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms