Coexpression cluster: Cluster_100 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0048208 COPII vesicle coating 3.48% (4/115) 8.68 0.0 0.0
GO:0006901 vesicle coating 3.48% (4/115) 8.2 0.0 0.0
GO:0070973 protein localization to endoplasmic reticulum exit site 3.48% (4/115) 8.33 0.0 0.0
GO:0030658 transport vesicle membrane 3.48% (4/115) 7.3 0.0 1e-06
GO:0012507 ER to Golgi transport vesicle membrane 3.48% (4/115) 7.34 0.0 1e-06
GO:0030662 coated vesicle membrane 3.48% (4/115) 7.34 0.0 1e-06
GO:0070971 endoplasmic reticulum exit site 3.48% (4/115) 6.12 0.0 2.4e-05
GO:0007030 Golgi organization 3.48% (4/115) 6.06 0.0 2.4e-05
GO:0008235 metalloexopeptidase activity 3.48% (4/115) 6.01 1e-06 2.5e-05
GO:0070972 protein localization to endoplasmic reticulum 3.48% (4/115) 5.7 1e-06 5.2e-05
GO:0061919 process utilizing autophagic mechanism 3.48% (4/115) 5.35 3e-06 0.000105
GO:0006914 autophagy 3.48% (4/115) 5.35 3e-06 0.000105
GO:0005684 U2-type spliceosomal complex 3.48% (4/115) 5.38 3e-06 0.000115
GO:0006397 mRNA processing 5.22% (6/115) 3.88 4e-06 0.000118
GO:0005052 peroxisome matrix targeting signal-1 binding 1.74% (2/115) 9.35 4e-06 0.000119
GO:0000268 peroxisome targeting sequence binding 1.74% (2/115) 8.96 8e-06 0.000195
GO:0030659 cytoplasmic vesicle membrane 3.48% (4/115) 4.79 1.5e-05 0.000334
GO:0012506 vesicle membrane 3.48% (4/115) 4.79 1.5e-05 0.000334
GO:0098588 bounding membrane of organelle 6.09% (7/115) 3.16 1.5e-05 0.00037
GO:0016050 vesicle organization 3.48% (4/115) 4.69 2e-05 0.000417
GO:0035551 obsolete protein initiator methionine removal involved in protein maturation 1.74% (2/115) 7.8 3.9e-05 0.000764
GO:0008237 metallopeptidase activity 3.48% (4/115) 4.37 4.7e-05 0.000887
GO:0016071 mRNA metabolic process 5.22% (6/115) 3.18 6.1e-05 0.001083
GO:0006396 RNA processing 6.96% (8/115) 2.53 8.3e-05 0.001427
GO:0000398 mRNA splicing, via spliceosome 3.48% (4/115) 4.14 8.8e-05 0.001441
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 3.48% (4/115) 4.06 0.000108 0.001705
GO:0016560 protein import into peroxisome matrix, docking 1.74% (2/115) 6.96 0.000125 0.001907
GO:0000375 RNA splicing, via transesterification reactions 3.48% (4/115) 3.95 0.000146 0.00214
GO:0031090 organelle membrane 6.09% (7/115) 2.58 0.000191 0.002706
GO:0005681 spliceosomal complex 3.48% (4/115) 3.79 0.000218 0.002983
GO:0008238 exopeptidase activity 3.48% (4/115) 3.74 0.000249 0.003298
GO:0008380 RNA splicing 3.48% (4/115) 3.72 0.000267 0.003433
GO:0065003 protein-containing complex assembly 4.35% (5/115) 3.01 0.000433 0.005388
GO:0016070 RNA metabolic process 8.7% (10/115) 1.84 0.00052 0.006284
GO:0140662 ATP-dependent protein folding chaperone 2.61% (3/115) 4.22 0.000602 0.007071
GO:0033036 macromolecule localization 5.22% (6/115) 2.48 0.000795 0.008596
GO:0070727 cellular macromolecule localization 5.22% (6/115) 2.48 0.000787 0.00874
GO:0008104 protein localization 5.22% (6/115) 2.48 0.000777 0.008876
GO:0044183 protein folding chaperone 2.61% (3/115) 4.01 0.000913 0.00962
GO:0033365 protein localization to organelle 3.48% (4/115) 3.17 0.0011 0.011306
GO:0004177 aminopeptidase activity 1.74% (2/115) 5.19 0.001428 0.014314
GO:0022607 cellular component assembly 4.35% (5/115) 2.43 0.002486 0.02322
GO:0031903 microbody membrane 1.74% (2/115) 4.8 0.00243 0.023224
GO:0005778 peroxisomal membrane 1.74% (2/115) 4.8 0.00243 0.023224
GO:0005575 cellular_component 31.3% (36/115) 0.65 0.002725 0.024887
GO:1990904 ribonucleoprotein complex 4.35% (5/115) 2.34 0.003284 0.026991
GO:1900364 negative regulation of mRNA polyadenylation 0.87% (1/115) 8.26 0.003248 0.027246
GO:0031440 regulation of mRNA 3'-end processing 0.87% (1/115) 8.26 0.003248 0.027246
GO:0050686 negative regulation of mRNA processing 0.87% (1/115) 8.26 0.003248 0.027246
GO:0031441 negative regulation of mRNA 3'-end processing 0.87% (1/115) 8.26 0.003248 0.027246
GO:0004168 dolichol kinase activity 0.87% (1/115) 8.03 0.003821 0.030197
GO:0043048 dolichyl monophosphate biosynthetic process 0.87% (1/115) 8.03 0.003821 0.030197
GO:0003723 RNA binding 6.96% (8/115) 1.66 0.004078 0.031041
GO:0005737 cytoplasm 8.7% (10/115) 1.43 0.004156 0.031055
GO:0043933 protein-containing complex organization 4.35% (5/115) 2.27 0.004022 0.031193
GO:2000573 positive regulation of DNA biosynthetic process 0.87% (1/115) 7.71 0.004773 0.032162
GO:1990275 preribosome binding 0.87% (1/115) 7.71 0.004773 0.032162
GO:0051973 positive regulation of telomerase activity 0.87% (1/115) 7.71 0.004773 0.032162
GO:0051641 cellular localization 5.22% (6/115) 1.98 0.004456 0.032702
GO:0110104 mRNA alternative polyadenylation 0.87% (1/115) 7.77 0.004583 0.033045
GO:0005048 signal sequence binding 1.74% (2/115) 4.31 0.004712 0.033393
GO:1903312 negative regulation of mRNA metabolic process 0.87% (1/115) 7.6 0.005154 0.034168
GO:0046621 negative regulation of organ growth 0.87% (1/115) 7.49 0.005535 0.035545
GO:0042277 peptide binding 1.74% (2/115) 4.2 0.005484 0.035778
GO:0048640 negative regulation of developmental growth 0.87% (1/115) 7.44 0.005725 0.036202
GO:0045926 negative regulation of growth 0.87% (1/115) 7.4 0.005916 0.036838
GO:0004784 superoxide dismutase activity 0.87% (1/115) 7.26 0.006486 0.039204
GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor 0.87% (1/115) 7.26 0.006486 0.039204
GO:0044248 cellular catabolic process 4.35% (5/115) 2.09 0.006751 0.039641
GO:0046838 obsolete phosphorylated carbohydrate dephosphorylation 0.87% (1/115) 7.22 0.006676 0.039768
GO:0048564 photosystem I assembly 0.87% (1/115) 7.07 0.007437 0.043048
GO:0046620 regulation of organ growth 0.87% (1/115) 6.99 0.007816 0.044008
GO:0140513 nuclear protein-containing complex 5.22% (6/115) 1.81 0.007782 0.044424
GO:0009637 response to blue light 0.87% (1/115) 6.86 0.008576 0.04763
GO:0033218 amide binding 1.74% (2/115) 3.84 0.008868 0.048596
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (115) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms