Coexpression cluster: Cluster_5840 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009330 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex 100.0% (3/3) 13.03 0.0 0.0
GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity 100.0% (3/3) 11.62 0.0 0.0
GO:0006265 DNA topological change 100.0% (3/3) 11.09 0.0 0.0
GO:0003916 DNA topoisomerase activity 100.0% (3/3) 10.78 0.0 0.0
GO:0071103 DNA conformation change 100.0% (3/3) 9.37 0.0 0.0
GO:0008094 ATP-dependent activity, acting on DNA 100.0% (3/3) 7.92 0.0 1e-06
GO:0051276 chromosome organization 100.0% (3/3) 7.75 0.0 1e-06
GO:0016853 isomerase activity 100.0% (3/3) 7.61 0.0 1e-06
GO:0140097 catalytic activity, acting on DNA 100.0% (3/3) 7.0 0.0 3e-06
GO:0006996 organelle organization 100.0% (3/3) 6.15 3e-06 1.7e-05
GO:1902494 catalytic complex 100.0% (3/3) 5.93 4e-06 2.2e-05
GO:0006259 DNA metabolic process 100.0% (3/3) 5.96 4e-06 2.2e-05
GO:0140657 ATP-dependent activity 100.0% (3/3) 5.85 5e-06 2.4e-05
GO:0140640 catalytic activity, acting on a nucleic acid 100.0% (3/3) 5.63 8e-06 3.5e-05
GO:0016043 cellular component organization 100.0% (3/3) 5.24 1.9e-05 7.3e-05
GO:0071840 cellular component organization or biogenesis 100.0% (3/3) 5.08 2.6e-05 8.9e-05
GO:0003677 DNA binding 100.0% (3/3) 5.09 2.6e-05 9.4e-05
GO:0005737 cytoplasm 100.0% (3/3) 4.96 3.3e-05 0.00011
GO:0090304 nucleic acid metabolic process 100.0% (3/3) 4.65 6.4e-05 0.000198
GO:0006139 nucleobase-containing compound metabolic process 100.0% (3/3) 4.41 0.000104 0.000291
GO:0032991 protein-containing complex 100.0% (3/3) 4.43 9.9e-05 0.000293
GO:0005524 ATP binding 100.0% (3/3) 4.34 0.00012 0.000321
GO:0046483 heterocycle metabolic process 100.0% (3/3) 4.31 0.000128 0.000327
GO:0034641 cellular nitrogen compound metabolic process 100.0% (3/3) 4.23 0.000153 0.000334
GO:0006725 cellular aromatic compound metabolic process 100.0% (3/3) 4.28 0.000137 0.000336
GO:1901360 organic cyclic compound metabolic process 100.0% (3/3) 4.24 0.000149 0.000338
GO:0035639 purine ribonucleoside triphosphate binding 100.0% (3/3) 4.24 0.000148 0.000349
GO:0032559 adenyl ribonucleotide binding 100.0% (3/3) 3.98 0.000253 0.000533
GO:0030554 adenyl nucleotide binding 100.0% (3/3) 3.93 0.000284 0.000559
GO:0097367 carbohydrate derivative binding 100.0% (3/3) 3.88 0.000313 0.00056
GO:0032553 ribonucleotide binding 100.0% (3/3) 3.89 0.000306 0.000565
GO:0032555 purine ribonucleotide binding 100.0% (3/3) 3.9 0.000299 0.000569
GO:0003676 nucleic acid binding 100.0% (3/3) 3.93 0.000284 0.000578
GO:0017076 purine nucleotide binding 100.0% (3/3) 3.85 0.000335 0.000582
GO:1901265 nucleoside phosphate binding 100.0% (3/3) 3.78 0.000384 0.000629
GO:0000166 nucleotide binding 100.0% (3/3) 3.78 0.000384 0.000629
GO:0036094 small molecule binding 100.0% (3/3) 3.73 0.000425 0.000643
GO:0043168 anion binding 100.0% (3/3) 3.76 0.000405 0.000646
GO:1901363 heterocyclic compound binding 100.0% (3/3) 3.74 0.000417 0.000647
GO:0043167 ion binding 100.0% (3/3) 3.28 0.001091 0.001609
GO:0043170 macromolecule metabolic process 100.0% (3/3) 3.2 0.001291 0.001857
GO:0044237 cellular metabolic process 100.0% (3/3) 3.09 0.001612 0.002265
GO:0006807 nitrogen compound metabolic process 100.0% (3/3) 3.05 0.001757 0.002411
GO:0044238 primary metabolic process 100.0% (3/3) 2.8 0.002981 0.003908
GO:0005694 chromosome 33.33% (1/3) 8.34 0.003082 0.003953
GO:0097159 organic cyclic compound binding 100.0% (3/3) 2.8 0.002959 0.003968
GO:0071704 organic substance metabolic process 100.0% (3/3) 2.71 0.003573 0.004486
GO:0008152 metabolic process 100.0% (3/3) 2.64 0.004129 0.005075
GO:0110165 cellular anatomical entity 100.0% (3/3) 2.5 0.005519 0.006646
GO:0003824 catalytic activity 100.0% (3/3) 2.47 0.005929 0.006996
GO:0009987 cellular process 100.0% (3/3) 2.44 0.006253 0.007233
GO:0005575 cellular_component 100.0% (3/3) 2.32 0.00799 0.009066
GO:0005488 binding 100.0% (3/3) 2.15 0.01149 0.012791
GO:0008150 biological_process 100.0% (3/3) 1.85 0.021524 0.023518
GO:0043228 non-membrane-bounded organelle 33.33% (1/3) 4.74 0.03702 0.039004
GO:0043232 intracellular non-membrane-bounded organelle 33.33% (1/3) 4.74 0.037016 0.039708
GO:0003674 molecular_function 100.0% (3/3) 1.5 0.044202 0.045753
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (3) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms