Coexpression cluster: Cluster_11692 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0002100 tRNA wobble adenosine to inosine editing 100.0% (2/2) 14.55 0.0 0.0
GO:0008251 tRNA-specific adenosine deaminase activity 100.0% (2/2) 13.61 0.0 0.0
GO:0006382 adenosine to inosine editing 100.0% (2/2) 13.71 0.0 0.0
GO:0004000 adenosine deaminase activity 100.0% (2/2) 13.17 0.0 0.0
GO:0016553 base conversion or substitution editing 100.0% (2/2) 12.29 0.0 0.0
GO:0019239 deaminase activity 100.0% (2/2) 11.8 0.0 1e-06
GO:0002097 tRNA wobble base modification 100.0% (2/2) 11.41 0.0 1e-06
GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 100.0% (2/2) 11.24 0.0 1e-06
GO:0006400 tRNA modification 100.0% (2/2) 9.11 3e-06 1.6e-05
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 100.0% (2/2) 8.89 4e-06 1.9e-05
GO:0008033 tRNA processing 100.0% (2/2) 8.74 5e-06 2.1e-05
GO:0006399 tRNA metabolic process 100.0% (2/2) 7.64 2.5e-05 9.1e-05
GO:0009536 plastid 100.0% (2/2) 7.33 3.9e-05 0.000111
GO:0009451 RNA modification 100.0% (2/2) 7.34 3.8e-05 0.000117
GO:0009507 chloroplast 100.0% (2/2) 7.37 3.7e-05 0.000121
GO:0034470 ncRNA processing 100.0% (2/2) 7.12 5.2e-05 0.000139
GO:0034660 ncRNA metabolic process 100.0% (2/2) 6.64 0.000101 0.000255
GO:0006396 RNA processing 100.0% (2/2) 6.38 0.000145 0.000347
GO:0016070 RNA metabolic process 100.0% (2/2) 5.36 0.000589 0.001333
GO:0090304 nucleic acid metabolic process 100.0% (2/2) 4.65 0.001597 0.003434
GO:0006139 nucleobase-containing compound metabolic process 100.0% (2/2) 4.41 0.002208 0.004521
GO:0034641 cellular nitrogen compound metabolic process 100.0% (2/2) 4.23 0.002857 0.004913
GO:0046483 heterocycle metabolic process 100.0% (2/2) 4.31 0.002534 0.004953
GO:0006725 cellular aromatic compound metabolic process 100.0% (2/2) 4.28 0.002653 0.00496
GO:0016787 hydrolase activity 100.0% (2/2) 4.19 0.003007 0.004973
GO:1901360 organic cyclic compound metabolic process 100.0% (2/2) 4.24 0.002811 0.005036
GO:0043412 macromolecule modification 100.0% (2/2) 4.15 0.003177 0.005059
GO:0043227 membrane-bounded organelle 100.0% (2/2) 3.82 0.004993 0.007404
GO:0043231 intracellular membrane-bounded organelle 100.0% (2/2) 3.83 0.004919 0.007554
GO:0043226 organelle 100.0% (2/2) 3.62 0.006651 0.009226
GO:0043229 intracellular organelle 100.0% (2/2) 3.62 0.00665 0.009531
GO:0043170 macromolecule metabolic process 100.0% (2/2) 3.2 0.011854 0.015929
GO:0044237 cellular metabolic process 100.0% (2/2) 3.09 0.01375 0.017917
GO:0006807 nitrogen compound metabolic process 100.0% (2/2) 3.05 0.014562 0.018416
GO:0044238 primary metabolic process 100.0% (2/2) 2.8 0.020711 0.025445
GO:0071704 organic substance metabolic process 100.0% (2/2) 2.71 0.023373 0.027918
GO:0008152 metabolic process 100.0% (2/2) 2.64 0.025737 0.02991
GO:0110165 cellular anatomical entity 100.0% (2/2) 2.5 0.031232 0.035341
GO:0003824 catalytic activity 100.0% (2/2) 2.47 0.032758 0.036118
GO:0009987 cellular process 100.0% (2/2) 2.44 0.033939 0.036485
GO:0005575 cellular_component 100.0% (2/2) 2.32 0.039968 0.041918
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms