Coexpression cluster: Cluster_67 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0017119 Golgi transport complex 4.88% (4/82) 7.92 0.0 1e-06
GO:0007155 cell adhesion 3.66% (3/82) 9.47 0.0 2e-06
GO:0007030 Golgi organization 4.88% (4/82) 6.55 0.0 1.5e-05
GO:0099023 vesicle tethering complex 6.1% (5/82) 4.9 1e-06 7.6e-05
GO:0006891 intra-Golgi vesicle-mediated transport 4.88% (4/82) 5.53 2e-06 0.000144
GO:0048193 Golgi vesicle transport 6.1% (5/82) 4.25 7e-06 0.000441
GO:0016192 vesicle-mediated transport 7.32% (6/82) 3.16 6.2e-05 0.001386
GO:0034315 regulation of Arp2/3 complex-mediated actin nucleation 2.44% (2/82) 7.5 5.9e-05 0.001412
GO:0051127 positive regulation of actin nucleation 2.44% (2/82) 7.5 5.9e-05 0.001412
GO:0071933 Arp2/3 complex binding 2.44% (2/82) 7.5 5.9e-05 0.001412
GO:0051495 positive regulation of cytoskeleton organization 2.44% (2/82) 7.5 5.9e-05 0.001412
GO:0034237 protein kinase A regulatory subunit binding 2.44% (2/82) 7.5 5.9e-05 0.001412
GO:1902905 positive regulation of supramolecular fiber organization 2.44% (2/82) 7.5 5.9e-05 0.001412
GO:2000601 positive regulation of Arp2/3 complex-mediated actin nucleation 2.44% (2/82) 7.5 5.9e-05 0.001412
GO:0051018 protein kinase A binding 2.44% (2/82) 7.5 5.9e-05 0.001412
GO:0051234 establishment of localization 14.63% (12/82) 1.91 7.7e-05 0.001528
GO:0004222 metalloendopeptidase activity 3.66% (3/82) 5.26 7.3e-05 0.001536
GO:0051179 localization 14.63% (12/82) 1.86 0.000109 0.002045
GO:0033036 macromolecule localization 7.32% (6/82) 2.97 0.000128 0.00209
GO:0070727 cellular macromolecule localization 7.32% (6/82) 2.97 0.000127 0.002167
GO:0008104 protein localization 7.32% (6/82) 2.97 0.000126 0.002247
GO:0051125 regulation of actin nucleation 2.44% (2/82) 6.81 0.000155 0.00241
GO:0006810 transport 14.63% (12/82) 1.98 5e-05 0.002566
GO:0015031 protein transport 6.1% (5/82) 3.17 0.00025 0.003725
GO:0010638 positive regulation of organelle organization 2.44% (2/82) 6.08 0.000423 0.005407
GO:0005856 cytoskeleton 3.66% (3/82) 4.41 0.00041 0.005435
GO:0008237 metallopeptidase activity 3.66% (3/82) 4.44 0.000381 0.005453
GO:0110053 regulation of actin filament organization 2.44% (2/82) 6.13 0.000396 0.005456
GO:1902903 regulation of supramolecular fiber organization 2.44% (2/82) 6.02 0.000458 0.005659
GO:0032970 regulation of actin filament-based process 2.44% (2/82) 5.74 0.000676 0.006726
GO:0015095 magnesium ion transmembrane transporter activity 2.44% (2/82) 5.75 0.000667 0.006819
GO:0015693 magnesium ion transport 2.44% (2/82) 5.75 0.000667 0.006819
GO:0051130 positive regulation of cellular component organization 2.44% (2/82) 5.69 0.000716 0.006927
GO:0032774 RNA biosynthetic process 4.88% (4/82) 3.41 0.00059 0.007035
GO:0140096 catalytic activity, acting on a protein 15.85% (13/82) 1.49 0.000665 0.007209
GO:0032956 regulation of actin cytoskeleton organization 2.44% (2/82) 5.75 0.000662 0.007405
GO:0030159 signaling receptor complex adaptor activity 1.22% (1/82) 10.25 0.000818 0.007513
GO:0051641 cellular localization 7.32% (6/82) 2.47 0.000801 0.007544
GO:0045184 establishment of protein localization 6.1% (5/82) 2.87 0.000655 0.00756
GO:0005575 cellular_component 35.37% (29/82) 0.82 0.000854 0.007644
GO:0030036 actin cytoskeleton organization 2.44% (2/82) 5.5 0.00093 0.008118
GO:0035591 signaling adaptor activity 1.22% (1/82) 10.03 0.000955 0.008139
GO:0006996 organelle organization 7.32% (6/82) 2.37 0.001112 0.00905
GO:0071702 organic substance transport 7.32% (6/82) 2.37 0.001106 0.009211
GO:0009987 cellular process 32.93% (27/82) 0.84 0.001201 0.009552
GO:0008150 biological_process 43.9% (36/82) 0.66 0.001311 0.009986
GO:0051493 regulation of cytoskeleton organization 2.44% (2/82) 5.26 0.001301 0.010124
GO:0032991 protein-containing complex 13.41% (11/82) 1.53 0.001403 0.010462
GO:0051996 squalene synthase activity 1.22% (1/82) 9.38 0.0015 0.010529
GO:0004310 farnesyl-diphosphate farnesyltransferase activity 1.22% (1/82) 9.38 0.0015 0.010529
GO:0110165 cellular anatomical entity 31.71% (26/82) 0.84 0.001455 0.010634
GO:0008233 peptidase activity 6.1% (5/82) 2.44 0.00241 0.01628
GO:0006351 DNA-templated transcription 3.66% (3/82) 3.5 0.00246 0.016311
GO:0071705 nitrogen compound transport 6.1% (5/82) 2.44 0.002395 0.016488
GO:0019887 protein kinase regulator activity 2.44% (2/82) 4.38 0.004254 0.027689
GO:0019207 kinase regulator activity 2.44% (2/82) 4.33 0.004552 0.029103
GO:0030029 actin filament-based process 2.44% (2/82) 4.28 0.004898 0.030763
GO:0004843 cysteine-type deubiquitinase activity 2.44% (2/82) 4.18 0.005624 0.033558
GO:0030904 retromer complex 1.22% (1/82) 7.48 0.00558 0.033856
GO:0034654 nucleobase-containing compound biosynthetic process 4.88% (4/82) 2.51 0.005532 0.034144
GO:0016043 cellular component organization 8.54% (7/82) 1.69 0.006112 0.035872
GO:0004824 lysine-tRNA ligase activity 1.22% (1/82) 7.28 0.006394 0.036332
GO:0006430 lysyl-tRNA aminoacylation 1.22% (1/82) 7.28 0.006394 0.036332
GO:0101005 deubiquitinase activity 2.44% (2/82) 4.06 0.006597 0.036902
GO:0016579 protein deubiquitination 2.44% (2/82) 3.97 0.007396 0.040733
GO:0005834 heterotrimeric G-protein complex 1.22% (1/82) 6.91 0.00829 0.043645
GO:1905360 GTPase complex 1.22% (1/82) 6.91 0.00829 0.043645
GO:0050794 regulation of cellular process 12.2% (10/82) 1.27 0.008192 0.044433
GO:0034198 cellular response to amino acid starvation 1.22% (1/82) 6.79 0.008967 0.044584
GO:0004311 farnesyltranstransferase activity 1.22% (1/82) 6.79 0.008967 0.044584
GO:1990928 response to amino acid starvation 1.22% (1/82) 6.79 0.008967 0.044584
GO:0019783 ubiquitin-like protein peptidase activity 2.44% (2/82) 3.85 0.008671 0.044991
GO:0070646 protein modification by small protein removal 2.44% (2/82) 3.73 0.010126 0.047697
GO:0048522 positive regulation of cellular process 3.66% (3/82) 2.76 0.010073 0.048082
GO:0045338 farnesyl diphosphate metabolic process 1.22% (1/82) 6.63 0.010048 0.048611
GO:0016020 membrane 13.41% (11/82) 1.16 0.010016 0.049118
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (82) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms