Coexpression cluster: Cluster_589 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009620 response to fungus 7.69% (8/104) 4.28 0.0 2e-06
GO:0050832 defense response to fungus 7.69% (8/104) 4.28 0.0 2e-06
GO:0004817 cysteine-tRNA ligase activity 2.88% (3/104) 8.08 0.0 1.8e-05
GO:0006423 cysteinyl-tRNA aminoacylation 2.88% (3/104) 8.08 0.0 1.8e-05
GO:0007030 Golgi organization 3.85% (4/104) 6.21 0.0 1.8e-05
GO:0000209 protein polyubiquitination 4.81% (5/104) 5.2 0.0 2.2e-05
GO:0009607 response to biotic stimulus 11.54% (12/104) 2.53 1e-06 3.6e-05
GO:0044419 biological process involved in interspecies interaction between organisms 11.54% (12/104) 2.53 1e-06 3.9e-05
GO:0003887 DNA-directed DNA polymerase activity 3.85% (4/104) 5.64 2e-06 4e-05
GO:0043207 response to external biotic stimulus 11.54% (12/104) 2.53 1e-06 4.2e-05
GO:0051707 response to other organism 11.54% (12/104) 2.53 1e-06 4.7e-05
GO:0098542 defense response to other organism 11.54% (12/104) 2.53 1e-06 4.7e-05
GO:0006261 DNA-templated DNA replication 3.85% (4/104) 5.55 2e-06 4.8e-05
GO:0006950 response to stress 15.38% (16/104) 2.1 1e-06 4.8e-05
GO:0006952 defense response 11.54% (12/104) 2.46 2e-06 4.9e-05
GO:0043531 ADP binding 9.62% (10/104) 2.77 2e-06 5e-05
GO:0009605 response to external stimulus 11.54% (12/104) 2.44 2e-06 5.1e-05
GO:0034061 DNA polymerase activity 3.85% (4/104) 5.4 3e-06 5.6e-05
GO:0050896 response to stimulus 15.38% (16/104) 1.93 5e-06 8.3e-05
GO:0032555 purine ribonucleotide binding 19.23% (20/104) 1.52 1.7e-05 0.000263
GO:0031267 small GTPase binding 2.88% (3/104) 5.98 1.7e-05 0.00027
GO:0051020 GTPase binding 2.88% (3/104) 5.98 1.7e-05 0.00027
GO:0032553 ribonucleotide binding 19.23% (20/104) 1.51 1.9e-05 0.000271
GO:0006996 organelle organization 8.65% (9/104) 2.61 1.8e-05 0.000274
GO:0097367 carbohydrate derivative binding 19.23% (20/104) 1.5 2.1e-05 0.00029
GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity 2.88% (3/104) 5.68 3.1e-05 0.000338
GO:1904029 regulation of cyclin-dependent protein kinase activity 2.88% (3/104) 5.68 3.1e-05 0.000338
GO:0044770 cell cycle phase transition 2.88% (3/104) 5.7 3e-05 0.000352
GO:0044772 mitotic cell cycle phase transition 2.88% (3/104) 5.7 3e-05 0.000352
GO:0032559 adenyl ribonucleotide binding 18.27% (19/104) 1.53 2.7e-05 0.000354
GO:0017076 purine nucleotide binding 19.23% (20/104) 1.47 2.9e-05 0.00037
GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity 2.88% (3/104) 5.61 3.6e-05 0.000385
GO:0030554 adenyl nucleotide binding 18.27% (19/104) 1.47 4.5e-05 0.000472
GO:0018208 peptidyl-proline modification 2.88% (3/104) 5.45 4.9e-05 0.000497
GO:1901265 nucleoside phosphate binding 19.23% (20/104) 1.4 5.5e-05 0.000525
GO:0000166 nucleotide binding 19.23% (20/104) 1.4 5.5e-05 0.000525
GO:0043168 anion binding 19.23% (20/104) 1.38 7e-05 0.00065
GO:0071900 regulation of protein serine/threonine kinase activity 2.88% (3/104) 5.21 8e-05 0.000704
GO:1901363 heterocyclic compound binding 19.23% (20/104) 1.36 8e-05 0.000723
GO:0006260 DNA replication 3.85% (4/104) 4.13 8.8e-05 0.00074
GO:0036094 small molecule binding 19.23% (20/104) 1.35 8.8e-05 0.000753
GO:0043549 regulation of kinase activity 2.88% (3/104) 5.05 0.000111 0.000887
GO:0008150 biological_process 45.19% (47/104) 0.7 0.000115 0.000897
GO:0045859 regulation of protein kinase activity 2.88% (3/104) 5.06 0.00011 0.000898
GO:0000307 cyclin-dependent protein kinase holoenzyme complex 2.88% (3/104) 5.02 0.000118 0.000901
GO:0006511 ubiquitin-dependent protein catabolic process 4.81% (5/104) 3.4 0.000122 0.000912
GO:0042325 regulation of phosphorylation 2.88% (3/104) 4.93 0.000142 0.001013
GO:0001932 regulation of protein phosphorylation 2.88% (3/104) 4.94 0.00014 0.001024
GO:0004842 ubiquitin-protein transferase activity 4.81% (5/104) 3.34 0.000149 0.00104
GO:0061630 ubiquitin protein ligase activity 3.85% (4/104) 3.87 0.000176 0.001183
GO:0019787 ubiquitin-like protein transferase activity 4.81% (5/104) 3.29 0.000175 0.001198
GO:0019941 modification-dependent protein catabolic process 4.81% (5/104) 3.27 0.00019 0.00125
GO:0016755 aminoacyltransferase activity 4.81% (5/104) 3.26 0.000194 0.001257
GO:0061659 ubiquitin-like protein ligase activity 3.85% (4/104) 3.81 0.000207 0.001314
GO:0043632 modification-dependent macromolecule catabolic process 4.81% (5/104) 3.21 0.000229 0.00143
GO:0051338 regulation of transferase activity 2.88% (3/104) 4.66 0.000248 0.001516
GO:0019887 protein kinase regulator activity 2.88% (3/104) 4.63 0.000265 0.001566
GO:0006302 double-strand break repair 3.85% (4/104) 3.72 0.000261 0.00157
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process 3.85% (4/104) 3.7 0.000279 0.00162
GO:0051174 regulation of phosphorus metabolic process 2.88% (3/104) 4.56 0.0003 0.001661
GO:0019220 regulation of phosphate metabolic process 2.88% (3/104) 4.56 0.0003 0.001661
GO:0019207 kinase regulator activity 2.88% (3/104) 4.58 0.000293 0.001676
GO:0016320 endoplasmic reticulum membrane fusion 1.92% (2/104) 6.19 0.000361 0.001968
GO:0048193 Golgi vesicle transport 3.85% (4/104) 3.59 0.000371 0.00199
GO:1902554 serine/threonine protein kinase complex 2.88% (3/104) 4.45 0.00038 0.002007
GO:0031399 regulation of protein modification process 2.88% (3/104) 4.41 0.000409 0.002061
GO:1902911 protein kinase complex 2.88% (3/104) 4.42 0.000404 0.00207
GO:0010498 proteasomal protein catabolic process 3.85% (4/104) 3.56 0.000399 0.002072
GO:0030163 protein catabolic process 3.85% (4/104) 3.44 0.000549 0.002729
GO:0051603 proteolysis involved in protein catabolic process 4.81% (5/104) 2.92 0.000557 0.002732
GO:0051246 regulation of protein metabolic process 3.85% (4/104) 3.38 0.000633 0.003056
GO:0016567 protein ubiquitination 4.81% (5/104) 2.84 0.000724 0.003448
GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport 2.88% (3/104) 4.06 0.000819 0.00385
GO:0007029 endoplasmic reticulum organization 1.92% (2/104) 5.51 0.000926 0.004237
GO:0032446 protein modification by small protein conjugation 4.81% (5/104) 2.76 0.00092 0.004264
GO:0016779 nucleotidyltransferase activity 3.85% (4/104) 3.2 0.001015 0.004582
GO:0140640 catalytic activity, acting on a nucleic acid 7.69% (8/104) 1.93 0.001264 0.00563
GO:0000413 protein peptidyl-prolyl isomerization 1.92% (2/104) 5.19 0.001425 0.006266
GO:0090158 endoplasmic reticulum membrane organization 1.92% (2/104) 5.15 0.001506 0.006538
GO:0050790 regulation of catalytic activity 2.88% (3/104) 3.74 0.001553 0.006658
GO:0004812 aminoacyl-tRNA ligase activity 2.88% (3/104) 3.66 0.001829 0.00738
GO:0016875 ligase activity, forming carbon-oxygen bonds 2.88% (3/104) 3.66 0.001829 0.00738
GO:0065009 regulation of molecular function 2.88% (3/104) 3.68 0.001751 0.007414
GO:0016043 cellular component organization 8.65% (9/104) 1.71 0.001819 0.007516
GO:0006418 tRNA aminoacylation for protein translation 2.88% (3/104) 3.66 0.001814 0.007587
GO:0043039 tRNA aminoacylation 2.88% (3/104) 3.63 0.001928 0.007691
GO:0043167 ion binding 20.19% (21/104) 0.97 0.001958 0.007718
GO:0043038 amino acid activation 2.88% (3/104) 3.58 0.002113 0.008235
GO:0090174 organelle membrane fusion 1.92% (2/104) 4.81 0.002409 0.009285
GO:0070647 protein modification by small protein conjugation or removal 4.81% (5/104) 2.43 0.002504 0.009542
GO:0009057 macromolecule catabolic process 4.81% (5/104) 2.41 0.002644 0.009967
GO:0046907 intracellular transport 4.81% (5/104) 2.37 0.002979 0.010985
GO:0061025 membrane fusion 1.92% (2/104) 4.65 0.002974 0.011087
GO:0048284 organelle fusion 1.92% (2/104) 4.6 0.003179 0.011599
GO:0051649 establishment of localization in cell 4.81% (5/104) 2.32 0.003439 0.012417
GO:0006508 proteolysis 5.77% (6/104) 2.03 0.003756 0.013282
GO:0071840 cellular component organization or biogenesis 8.65% (9/104) 1.55 0.003745 0.013379
GO:0043170 macromolecule metabolic process 20.19% (21/104) 0.89 0.003825 0.013388
GO:0051726 regulation of cell cycle 2.88% (3/104) 3.23 0.004209 0.014584
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 1.92% (2/104) 4.26 0.005015 0.017202
GO:0036211 protein modification process 11.54% (12/104) 1.22 0.005555 0.018866
GO:0019899 enzyme binding 2.88% (3/104) 3.07 0.005693 0.019145
GO:0140096 catalytic activity, acting on a protein 12.5% (13/104) 1.15 0.005785 0.019266
GO:0097159 organic cyclic compound binding 24.04% (25/104) 0.74 0.005891 0.01943
GO:0043687 post-translational protein modification 4.81% (5/104) 2.13 0.005991 0.01957
GO:0017111 ribonucleoside triphosphate phosphatase activity 4.81% (5/104) 2.12 0.006096 0.019726
GO:0005737 cytoplasm 8.65% (9/104) 1.43 0.006576 0.021079
GO:0140101 catalytic activity, acting on a tRNA 2.88% (3/104) 2.99 0.006646 0.021107
GO:0061695 transferase complex, transferring phosphorus-containing groups 2.88% (3/104) 2.96 0.007026 0.02211
GO:0016859 cis-trans isomerase activity 1.92% (2/104) 4.0 0.007157 0.022318
GO:0016462 pyrophosphatase activity 4.81% (5/104) 2.03 0.008028 0.024808
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 4.81% (5/104) 2.0 0.008601 0.026341
GO:0016817 hydrolase activity, acting on acid anhydrides 4.81% (5/104) 1.99 0.008937 0.026426
GO:1901565 organonitrogen compound catabolic process 3.85% (4/104) 2.32 0.008713 0.026448
GO:0016746 acyltransferase activity 4.81% (5/104) 1.99 0.008893 0.026524
GO:0006520 amino acid metabolic process 3.85% (4/104) 2.32 0.008829 0.026565
GO:0006281 DNA repair 3.85% (4/104) 2.3 0.009183 0.026694
GO:0140097 catalytic activity, acting on DNA 3.85% (4/104) 2.3 0.009137 0.026786
GO:1903047 mitotic cell cycle process 2.88% (3/104) 2.81 0.009351 0.026954
GO:1990745 EARP complex 0.96% (1/104) 6.69 0.009646 0.027572
GO:0005794 Golgi apparatus 2.88% (3/104) 2.78 0.009879 0.028003
GO:0016192 vesicle-mediated transport 3.85% (4/104) 2.23 0.010817 0.030411
GO:0010494 cytoplasmic stress granule 0.96% (1/104) 6.47 0.011188 0.031198
GO:1901564 organonitrogen compound metabolic process 15.38% (16/104) 0.89 0.01178 0.032585
GO:0006807 nitrogen compound metabolic process 20.19% (21/104) 0.74 0.012076 0.033137
GO:0006974 DNA damage response 3.85% (4/104) 2.17 0.012522 0.034087
GO:0005783 endoplasmic reticulum 2.88% (3/104) 2.64 0.01276 0.034193
GO:0051641 cellular localization 4.81% (5/104) 1.86 0.012736 0.034396
GO:0004656 procollagen-proline 4-dioxygenase activity 0.96% (1/104) 6.21 0.01341 0.034585
GO:0019798 procollagen-proline dioxygenase activity 0.96% (1/104) 6.21 0.01341 0.034585
GO:0031545 peptidyl-proline 4-dioxygenase activity 0.96% (1/104) 6.21 0.01341 0.034585
GO:0019471 4-hydroxyproline metabolic process 0.96% (1/104) 6.21 0.01341 0.034585
GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline 0.96% (1/104) 6.21 0.01341 0.034585
GO:0019511 peptidyl-proline hydroxylation 0.96% (1/104) 6.17 0.013752 0.034683
GO:0031543 peptidyl-proline dioxygenase activity 0.96% (1/104) 6.17 0.013752 0.034683
GO:0018193 peptidyl-amino acid modification 2.88% (3/104) 2.6 0.013668 0.034986
GO:0043231 intracellular membrane-bounded organelle 13.46% (14/104) 0.94 0.013993 0.035034
GO:0043412 macromolecule modification 11.54% (12/104) 1.03 0.014291 0.03552
GO:0034063 stress granule assembly 0.96% (1/104) 6.05 0.014946 0.036618
GO:0043227 membrane-bounded organelle 13.46% (14/104) 0.93 0.014855 0.036656
GO:0006399 tRNA metabolic process 2.88% (3/104) 2.52 0.015866 0.038597
GO:0019538 protein metabolic process 12.5% (13/104) 0.95 0.01731 0.041812
GO:0008138 protein tyrosine/serine/threonine phosphatase activity 0.96% (1/104) 5.82 0.017501 0.041977
GO:0018126 protein hydroxylation 0.96% (1/104) 5.81 0.017671 0.042091
GO:0033962 P-body assembly 0.96% (1/104) 5.68 0.01937 0.04582
GO:0032456 endocytic recycling 0.96% (1/104) 5.61 0.020218 0.047499
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (104) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms