Coexpression cluster: Cluster_6890 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0035145 exon-exon junction complex 100.0% (2/2) 12.16 0.0 1e-06
GO:0005844 polysome 100.0% (2/2) 12.34 0.0 2e-06
GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 100.0% (2/2) 11.07 0.0 4e-06
GO:0000956 nuclear-transcribed mRNA catabolic process 100.0% (2/2) 9.41 2e-06 3.3e-05
GO:0006402 mRNA catabolic process 100.0% (2/2) 9.1 3e-06 4.1e-05
GO:0006401 RNA catabolic process 100.0% (2/2) 8.85 5e-06 4.8e-05
GO:0044270 cellular nitrogen compound catabolic process 100.0% (2/2) 7.83 1.9e-05 0.00012
GO:0046700 heterocycle catabolic process 100.0% (2/2) 7.83 1.9e-05 0.00012
GO:0009892 negative regulation of metabolic process 100.0% (2/2) 7.36 3.7e-05 0.000121
GO:0009890 negative regulation of biosynthetic process 100.0% (2/2) 7.52 3e-05 0.000123
GO:0031324 negative regulation of cellular metabolic process 100.0% (2/2) 7.37 3.7e-05 0.000126
GO:0016071 mRNA metabolic process 100.0% (2/2) 7.44 3.3e-05 0.000129
GO:0010605 negative regulation of macromolecule metabolic process 100.0% (2/2) 7.39 3.6e-05 0.00013
GO:0010629 negative regulation of gene expression 100.0% (2/2) 7.93 1.7e-05 0.000131
GO:1901361 organic cyclic compound catabolic process 100.0% (2/2) 7.63 2.5e-05 0.000131
GO:0031327 negative regulation of cellular biosynthetic process 100.0% (2/2) 7.52 3e-05 0.000131
GO:0010558 negative regulation of macromolecule biosynthetic process 100.0% (2/2) 7.56 2.8e-05 0.000133
GO:0019439 aromatic compound catabolic process 100.0% (2/2) 7.66 2.4e-05 0.000138
GO:0034655 nucleobase-containing compound catabolic process 100.0% (2/2) 7.95 1.6e-05 0.000144
GO:0048519 negative regulation of biological process 100.0% (2/2) 6.96 6.4e-05 0.00019
GO:0048523 negative regulation of cellular process 100.0% (2/2) 6.99 6.2e-05 0.000193
GO:1990904 ribonucleoprotein complex 100.0% (2/2) 6.86 7.4e-05 0.000208
GO:0009057 macromolecule catabolic process 100.0% (2/2) 6.79 8.2e-05 0.00022
GO:0044248 cellular catabolic process 100.0% (2/2) 6.61 0.000104 0.00027
GO:0140513 nuclear protein-containing complex 100.0% (2/2) 6.07 0.000222 0.000552
GO:1901575 organic substance catabolic process 100.0% (2/2) 5.86 0.000297 0.000709
GO:0009056 catabolic process 100.0% (2/2) 5.79 0.000329 0.000755
GO:0003723 RNA binding 100.0% (2/2) 5.5 0.000485 0.001075
GO:0016070 RNA metabolic process 100.0% (2/2) 5.36 0.000589 0.001259
GO:0009889 regulation of biosynthetic process 100.0% (2/2) 4.98 0.001001 0.00188
GO:0005737 cytoplasm 100.0% (2/2) 4.96 0.001038 0.001893
GO:0010556 regulation of macromolecule biosynthetic process 100.0% (2/2) 5.01 0.000964 0.001929
GO:0031326 regulation of cellular biosynthetic process 100.0% (2/2) 4.98 0.000999 0.001936
GO:0010468 regulation of gene expression 100.0% (2/2) 5.02 0.000951 0.001966
GO:0031323 regulation of cellular metabolic process 100.0% (2/2) 4.87 0.001171 0.002017
GO:0060255 regulation of macromolecule metabolic process 100.0% (2/2) 4.88 0.001157 0.002049
GO:0019222 regulation of metabolic process 100.0% (2/2) 4.82 0.001247 0.00209
GO:0090304 nucleic acid metabolic process 100.0% (2/2) 4.65 0.001597 0.002606
GO:0032991 protein-containing complex 100.0% (2/2) 4.43 0.002144 0.003408
GO:0006139 nucleobase-containing compound metabolic process 100.0% (2/2) 4.41 0.002208 0.003422
GO:0050794 regulation of cellular process 100.0% (2/2) 4.31 0.002541 0.003751
GO:0006725 cellular aromatic compound metabolic process 100.0% (2/2) 4.28 0.002653 0.003825
GO:0046483 heterocycle metabolic process 100.0% (2/2) 4.31 0.002534 0.003832
GO:0034641 cellular nitrogen compound metabolic process 100.0% (2/2) 4.23 0.002857 0.00385
GO:1901360 organic cyclic compound metabolic process 100.0% (2/2) 4.24 0.002811 0.003873
GO:0050789 regulation of biological process 100.0% (2/2) 4.24 0.002804 0.003951
GO:0065007 biological regulation 100.0% (2/2) 4.14 0.003232 0.004263
GO:0003676 nucleic acid binding 100.0% (2/2) 3.93 0.004321 0.005581
GO:0005515 protein binding 100.0% (2/2) 3.74 0.00561 0.007098
GO:0043170 macromolecule metabolic process 100.0% (2/2) 3.2 0.011854 0.014699
GO:0044237 cellular metabolic process 100.0% (2/2) 3.09 0.01375 0.016716
GO:0006807 nitrogen compound metabolic process 100.0% (2/2) 3.05 0.014562 0.017362
GO:0044238 primary metabolic process 100.0% (2/2) 2.8 0.020711 0.023779
GO:0097159 organic cyclic compound binding 100.0% (2/2) 2.8 0.020611 0.024111
GO:0071704 organic substance metabolic process 100.0% (2/2) 2.71 0.023373 0.026348
GO:0008152 metabolic process 100.0% (2/2) 2.64 0.025737 0.028494
GO:0110165 cellular anatomical entity 100.0% (2/2) 2.5 0.031232 0.033971
GO:0009987 cellular process 100.0% (2/2) 2.44 0.033939 0.03628
GO:0005575 cellular_component 100.0% (2/2) 2.32 0.039968 0.042001
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms