Coexpression cluster: Cluster_11581 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0050072 obsolete m7G(5')pppN diphosphatase activity 50.0% (1/2) 14.87 3.3e-05 0.001575
GO:0140818 mRNA 5'-phosphatase activity 50.0% (1/2) 15.03 3e-05 0.002127
GO:0140933 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity 50.0% (1/2) 15.39 2.3e-05 0.003308
GO:0031323 regulation of cellular metabolic process 100.0% (2/2) 4.87 0.001171 0.008314
GO:0009889 regulation of biosynthetic process 100.0% (2/2) 4.98 0.001001 0.008359
GO:0019222 regulation of metabolic process 100.0% (2/2) 4.82 0.001247 0.008435
GO:0060255 regulation of macromolecule metabolic process 100.0% (2/2) 4.88 0.001157 0.008646
GO:0031326 regulation of cellular biosynthetic process 100.0% (2/2) 4.98 0.000999 0.008869
GO:0032786 positive regulation of DNA-templated transcription, elongation 50.0% (1/2) 9.77 0.001148 0.009056
GO:0032784 regulation of DNA-templated transcription elongation 50.0% (1/2) 9.48 0.001404 0.009062
GO:0140994 RNA polymerase II CTD heptapeptide repeat modifying activity 50.0% (1/2) 10.01 0.000968 0.009166
GO:0010556 regulation of macromolecule biosynthetic process 100.0% (2/2) 5.01 0.000964 0.009783
GO:0010468 regulation of gene expression 100.0% (2/2) 5.02 0.000951 0.010393
GO:0000307 cyclin-dependent protein kinase holoenzyme complex 50.0% (1/2) 9.14 0.001773 0.010947
GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 50.0% (1/2) 10.07 0.000932 0.011025
GO:0070816 obsolete phosphorylation of RNA polymerase II C-terminal domain 50.0% (1/2) 10.18 0.000862 0.011125
GO:0030145 manganese ion binding 50.0% (1/2) 10.22 0.000839 0.011907
GO:0110154 RNA decapping 50.0% (1/2) 10.24 0.000829 0.013073
GO:0110156 methylguanosine-cap decapping 50.0% (1/2) 10.31 0.000789 0.013998
GO:0050789 regulation of biological process 100.0% (2/2) 4.24 0.002804 0.014748
GO:1902911 protein kinase complex 50.0% (1/2) 8.53 0.002701 0.01475
GO:0000956 nuclear-transcribed mRNA catabolic process 50.0% (1/2) 8.41 0.002937 0.014893
GO:1902554 serine/threonine protein kinase complex 50.0% (1/2) 8.56 0.002644 0.015019
GO:0050794 regulation of cellular process 100.0% (2/2) 4.31 0.002541 0.015034
GO:0034243 regulation of transcription elongation by RNA polymerase II 50.0% (1/2) 10.38 0.000749 0.015188
GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA 50.0% (1/2) 11.17 0.000433 0.015358
GO:0065007 biological regulation 100.0% (2/2) 4.14 0.003232 0.015824
GO:0008353 RNA polymerase II CTD heptapeptide repeat kinase activity 50.0% (1/2) 10.74 0.000586 0.016633
GO:0006402 mRNA catabolic process 50.0% (1/2) 8.1 0.003648 0.016709
GO:0032968 positive regulation of transcription elongation by RNA polymerase II 50.0% (1/2) 10.44 0.000722 0.017089
GO:0045944 positive regulation of transcription by RNA polymerase II 50.0% (1/2) 8.1 0.003641 0.017234
GO:0006401 RNA catabolic process 50.0% (1/2) 7.85 0.004319 0.019164
GO:0045893 positive regulation of DNA-templated transcription 50.0% (1/2) 7.32 0.00626 0.026147
GO:1902680 positive regulation of RNA biosynthetic process 50.0% (1/2) 7.32 0.00626 0.026147
GO:0010629 negative regulation of gene expression 50.0% (1/2) 6.93 0.0082 0.027725
GO:0034655 nucleobase-containing compound catabolic process 50.0% (1/2) 6.95 0.008045 0.027862
GO:0031328 positive regulation of cellular biosynthetic process 50.0% (1/2) 7.02 0.007667 0.027914
GO:0010557 positive regulation of macromolecule biosynthetic process 50.0% (1/2) 7.02 0.007667 0.027914
GO:0009891 positive regulation of biosynthetic process 50.0% (1/2) 7.02 0.007667 0.027914
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 50.0% (1/2) 6.98 0.007882 0.027982
GO:0046700 heterocycle catabolic process 50.0% (1/2) 6.83 0.00877 0.028304
GO:0044270 cellular nitrogen compound catabolic process 50.0% (1/2) 6.83 0.00877 0.028304
GO:0009893 positive regulation of metabolic process 50.0% (1/2) 6.49 0.011065 0.028569
GO:0009892 negative regulation of metabolic process 50.0% (1/2) 6.36 0.012151 0.028757
GO:0010604 positive regulation of macromolecule metabolic process 50.0% (1/2) 6.49 0.011059 0.02908
GO:0031324 negative regulation of cellular metabolic process 50.0% (1/2) 6.37 0.012084 0.029085
GO:0010605 negative regulation of macromolecule metabolic process 50.0% (1/2) 6.39 0.011893 0.029116
GO:0016071 mRNA metabolic process 50.0% (1/2) 6.44 0.011512 0.029191
GO:0051173 positive regulation of nitrogen compound metabolic process 50.0% (1/2) 6.51 0.010913 0.029239
GO:0051254 positive regulation of RNA metabolic process 50.0% (1/2) 7.06 0.007461 0.02943
GO:0043170 macromolecule metabolic process 100.0% (2/2) 3.2 0.011854 0.029531
GO:0009890 negative regulation of biosynthetic process 50.0% (1/2) 6.52 0.010903 0.029774
GO:0048518 positive regulation of biological process 50.0% (1/2) 6.28 0.012865 0.029948
GO:0031325 positive regulation of cellular metabolic process 50.0% (1/2) 6.71 0.009509 0.030007
GO:0061695 transferase complex, transferring phosphorus-containing groups 50.0% (1/2) 7.07 0.007405 0.030042
GO:0031327 negative regulation of cellular biosynthetic process 50.0% (1/2) 6.52 0.010857 0.030229
GO:0006357 regulation of transcription by RNA polymerase II 50.0% (1/2) 6.24 0.013215 0.030268
GO:1901361 organic cyclic compound catabolic process 50.0% (1/2) 6.63 0.010039 0.030331
GO:0019439 aromatic compound catabolic process 50.0% (1/2) 6.66 0.009867 0.030459
GO:0048522 positive regulation of cellular process 50.0% (1/2) 6.54 0.010741 0.030504
GO:0043167 ion binding 100.0% (2/2) 3.28 0.010599 0.030715
GO:0044237 cellular metabolic process 100.0% (2/2) 3.09 0.01375 0.030993
GO:0010558 negative regulation of macromolecule biosynthetic process 50.0% (1/2) 6.56 0.010552 0.031217
GO:0006807 nitrogen compound metabolic process 100.0% (2/2) 3.05 0.014562 0.032309
GO:0048523 negative regulation of cellular process 50.0% (1/2) 5.99 0.015713 0.034328
GO:0048519 negative regulation of biological process 50.0% (1/2) 5.96 0.015994 0.034411
GO:0009057 macromolecule catabolic process 50.0% (1/2) 5.79 0.017997 0.038143
GO:1990234 transferase complex 50.0% (1/2) 5.75 0.018468 0.038567
GO:0044238 primary metabolic process 100.0% (2/2) 2.8 0.020711 0.041422
GO:0097159 organic cyclic compound binding 100.0% (2/2) 2.8 0.020611 0.041811
GO:0044248 cellular catabolic process 50.0% (1/2) 5.61 0.020327 0.041833
GO:0016817 hydrolase activity, acting on acid anhydrides 50.0% (1/2) 5.37 0.024095 0.04502
GO:0016462 pyrophosphatase activity 50.0% (1/2) 5.4 0.023467 0.045032
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 50.0% (1/2) 5.38 0.023869 0.045191
GO:0004674 protein serine/threonine kinase activity 50.0% (1/2) 5.33 0.024628 0.045418
GO:0071704 organic substance metabolic process 100.0% (2/2) 2.71 0.023373 0.045466
GO:0140098 catalytic activity, acting on RNA 50.0% (1/2) 5.42 0.023148 0.045654
GO:0008152 metabolic process 100.0% (2/2) 2.64 0.025737 0.046854
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms