Coexpression cluster: Cluster_205 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0099023 vesicle tethering complex 8.22% (6/73) 5.33 0.0 4e-06
GO:0016891 RNA endonuclease activity, producing 5'-phosphomonoesters 5.48% (4/73) 5.03 8e-06 0.000163
GO:0004523 RNA-DNA hybrid ribonuclease activity 5.48% (4/73) 5.79 1e-06 0.000166
GO:0035091 phosphatidylinositol binding 5.48% (4/73) 5.1 6e-06 0.000167
GO:0043087 regulation of GTPase activity 4.11% (3/73) 6.47 6e-06 0.000169
GO:0016149 translation release factor activity, codon specific 2.74% (2/73) 8.96 8e-06 0.000172
GO:0032991 protein-containing complex 19.18% (14/73) 2.05 6e-06 0.000177
GO:0098772 molecular function regulator activity 8.22% (6/73) 3.7 7e-06 0.00018
GO:1990825 sequence-specific mRNA binding 2.74% (2/73) 9.2 5e-06 0.000185
GO:0002184 cytoplasmic translational termination 2.74% (2/73) 9.2 5e-06 0.000185
GO:0018444 translation release factor complex 2.74% (2/73) 8.55 1.4e-05 0.00022
GO:0008289 lipid binding 6.85% (5/73) 4.07 1.3e-05 0.000227
GO:0000159 protein phosphatase type 2A complex 4.11% (3/73) 6.52 5e-06 0.000227
GO:0098876 vesicle-mediated transport to the plasma membrane 4.11% (3/73) 6.03 1.5e-05 0.000229
GO:1903293 phosphatase complex 4.11% (3/73) 6.12 1.2e-05 0.000231
GO:0008287 protein serine/threonine phosphatase complex 4.11% (3/73) 6.12 1.2e-05 0.000231
GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters 5.48% (4/73) 4.83 1.3e-05 0.000238
GO:0051336 regulation of hydrolase activity 4.11% (3/73) 5.97 1.7e-05 0.000246
GO:0030234 enzyme regulator activity 8.22% (6/73) 3.8 5e-06 0.00025
GO:0009987 cellular process 39.73% (29/73) 1.11 1.8e-05 0.000251
GO:0006893 Golgi to plasma membrane transport 4.11% (3/73) 6.56 5e-06 0.000277
GO:0048193 Golgi vesicle transport 6.85% (5/73) 4.42 4e-06 0.000281
GO:0051345 positive regulation of hydrolase activity 4.11% (3/73) 6.69 4e-06 0.000323
GO:0006892 post-Golgi vesicle-mediated transport 4.11% (3/73) 5.78 2.5e-05 0.000334
GO:0005543 phospholipid binding 5.48% (4/73) 4.56 2.7e-05 0.000356
GO:0043547 positive regulation of GTPase activity 4.11% (3/73) 6.76 3e-06 0.000369
GO:0019208 phosphatase regulator activity 4.11% (3/73) 5.62 3.4e-05 0.000385
GO:0019888 protein phosphatase regulator activity 4.11% (3/73) 5.66 3.2e-05 0.000387
GO:1990072 TRAPPIII protein complex 2.74% (2/73) 7.96 3.1e-05 0.000388
GO:0051179 localization 16.44% (12/73) 2.03 3.4e-05 0.000391
GO:0051641 cellular localization 9.59% (7/73) 2.86 5.4e-05 0.00059
GO:0004521 RNA endonuclease activity 5.48% (4/73) 4.3 5.6e-05 0.000593
GO:0005546 phosphatidylinositol-4,5-bisphosphate binding 4.11% (3/73) 5.35 6.1e-05 0.000618
GO:0043085 positive regulation of catalytic activity 4.11% (3/73) 5.3 6.6e-05 0.00062
GO:0008079 translation termination factor activity 2.74% (2/73) 7.42 6.6e-05 0.000634
GO:0003747 translation release factor activity 2.74% (2/73) 7.42 6.6e-05 0.000634
GO:1902936 phosphatidylinositol bisphosphate binding 4.11% (3/73) 5.23 7.7e-05 0.000699
GO:0000145 exocyst 4.11% (3/73) 5.19 8.3e-05 0.000721
GO:0044093 positive regulation of molecular function 4.11% (3/73) 5.2 8.2e-05 0.000724
GO:0007165 signal transduction 9.59% (7/73) 2.75 8.7e-05 0.000732
GO:1901981 phosphatidylinositol phosphate binding 4.11% (3/73) 5.12 9.7e-05 0.000796
GO:0006887 exocytosis 4.11% (3/73) 5.08 0.000104 0.000836
GO:0051234 establishment of localization 15.07% (11/73) 1.96 0.000115 0.000905
GO:0030008 TRAPP complex 2.74% (2/73) 6.93 0.00013 0.000998
GO:0030915 Smc5-Smc6 complex 2.74% (2/73) 6.89 0.000138 0.001012
GO:0106068 SUMO ligase complex 2.74% (2/73) 6.89 0.000138 0.001012
GO:0004540 RNA nuclease activity 5.48% (4/73) 3.91 0.000158 0.001106
GO:0004519 endonuclease activity 5.48% (4/73) 3.91 0.000155 0.00111
GO:0032940 secretion by cell 4.11% (3/73) 4.84 0.000169 0.001159
GO:0006415 translational termination 2.74% (2/73) 6.69 0.000183 0.001232
GO:0046903 secretion 4.11% (3/73) 4.79 0.000188 0.001244
GO:0005575 cellular_component 38.36% (28/73) 0.94 0.000228 0.001449
GO:0003674 molecular_function 56.16% (41/73) 0.67 0.000226 0.001463
GO:0007264 small GTPase mediated signal transduction 2.74% (2/73) 6.5 0.000236 0.001475
GO:0140352 export from cell 4.11% (3/73) 4.61 0.000269 0.001648
GO:0016192 vesicle-mediated transport 6.85% (5/73) 3.06 0.000348 0.002095
GO:0006810 transport 13.7% (10/73) 1.88 0.000362 0.002138
GO:0030695 GTPase regulator activity 4.11% (3/73) 4.31 0.000494 0.002822
GO:0060589 nucleoside-triphosphatase regulator activity 4.11% (3/73) 4.31 0.000494 0.002822
GO:0050790 regulation of catalytic activity 4.11% (3/73) 4.25 0.000557 0.003079
GO:0051668 localization within membrane 4.11% (3/73) 4.26 0.00055 0.003089
GO:0065009 regulation of molecular function 4.11% (3/73) 4.19 0.00063 0.003423
GO:0007030 Golgi organization 2.74% (2/73) 5.72 0.000694 0.00371
GO:0004518 nuclease activity 5.48% (4/73) 3.29 0.000785 0.004132
GO:0005085 guanyl-nucleotide exchange factor activity 2.74% (2/73) 5.41 0.001055 0.005468
GO:0070972 protein localization to endoplasmic reticulum 2.74% (2/73) 5.36 0.001131 0.00569
GO:0008150 biological_process 45.21% (33/73) 0.7 0.001118 0.005709
GO:0016020 membrane 16.44% (12/73) 1.45 0.001324 0.006561
GO:0032984 protein-containing complex disassembly 2.74% (2/73) 4.94 0.002001 0.009774
GO:0032561 guanyl ribonucleotide binding 4.11% (3/73) 3.51 0.002432 0.011543
GO:0005525 GTP binding 4.11% (3/73) 3.51 0.002432 0.011543
GO:0019001 guanyl nucleotide binding 4.11% (3/73) 3.46 0.002645 0.012381
GO:0065007 biological regulation 15.07% (11/73) 1.41 0.002704 0.012483
GO:0006891 intra-Golgi vesicle-mediated transport 2.74% (2/73) 4.7 0.002779 0.012656
GO:0033365 protein localization to organelle 4.11% (3/73) 3.41 0.002944 0.013227
GO:0016043 cellular component organization 9.59% (7/73) 1.86 0.003213 0.014248
GO:0005829 cytosol 6.85% (5/73) 2.27 0.003881 0.016987
GO:0005785 signal recognition particle receptor complex 1.37% (1/73) 7.96 0.004001 0.017287
GO:0033036 macromolecule localization 5.48% (4/73) 2.55 0.005012 0.018767
GO:0070727 cellular macromolecule localization 5.48% (4/73) 2.55 0.004978 0.018849
GO:0060491 regulation of cell projection assembly 1.37% (1/73) 7.76 0.004606 0.018929
GO:0032587 ruffle membrane 1.37% (1/73) 7.76 0.004606 0.018929
GO:0120032 regulation of plasma membrane bounded cell projection assembly 1.37% (1/73) 7.76 0.004606 0.018929
GO:1900027 regulation of ruffle assembly 1.37% (1/73) 7.76 0.004606 0.018929
GO:0031253 cell projection membrane 1.37% (1/73) 7.65 0.004969 0.019028
GO:0031344 regulation of cell projection organization 1.37% (1/73) 7.65 0.004969 0.019028
GO:0006450 regulation of translational fidelity 1.37% (1/73) 7.65 0.004969 0.019028
GO:0120035 regulation of plasma membrane bounded cell projection organization 1.37% (1/73) 7.65 0.004969 0.019028
GO:0031256 leading edge membrane 1.37% (1/73) 7.69 0.004848 0.019683
GO:0031012 extracellular matrix 1.37% (1/73) 7.55 0.005331 0.019743
GO:0008104 protein localization 5.48% (4/73) 2.55 0.004938 0.01981
GO:0022411 cellular component disassembly 2.74% (2/73) 4.19 0.005523 0.020231
GO:0071840 cellular component organization or biogenesis 9.59% (7/73) 1.7 0.005787 0.02097
GO:0090079 translation regulator activity, nucleic acid binding 2.74% (2/73) 4.09 0.00629 0.02208
GO:0008135 translation factor activity, RNA binding 2.74% (2/73) 4.09 0.00629 0.02208
GO:0048208 COPII vesicle coating 1.37% (1/73) 7.33 0.006177 0.022145
GO:0110165 cellular anatomical entity 30.14% (22/73) 0.77 0.00639 0.0222
GO:1902494 catalytic complex 6.85% (5/73) 2.06 0.007079 0.024343
GO:0035556 intracellular signal transduction 4.11% (3/73) 2.93 0.007306 0.024871
GO:0070973 protein localization to endoplasmic reticulum exit site 1.37% (1/73) 6.98 0.007866 0.025736
GO:0051740 ethylene binding 1.37% (1/73) 6.98 0.007866 0.025736
GO:0038199 ethylene receptor activity 1.37% (1/73) 6.98 0.007866 0.025736
GO:0045182 translation regulator activity 2.74% (2/73) 3.91 0.007988 0.025884
GO:0005488 binding 35.62% (26/73) 0.66 0.007735 0.026068
GO:0051083 'de novo' cotranslational protein folding 1.37% (1/73) 6.92 0.008227 0.026406
GO:0006901 vesicle coating 1.37% (1/73) 6.86 0.008589 0.027306
GO:0000724 double-strand break repair via homologous recombination 2.74% (2/73) 3.84 0.008789 0.02768
GO:0000725 recombinational repair 2.74% (2/73) 3.77 0.009685 0.030219
GO:0140098 catalytic activity, acting on RNA 5.48% (4/73) 2.23 0.010573 0.032689
GO:0016788 hydrolase activity, acting on ester bonds 6.85% (5/73) 1.91 0.01088 0.033332
GO:0015248 sterol transporter activity 1.37% (1/73) 6.48 0.011115 0.033445
GO:0050794 regulation of cellular process 12.33% (9/73) 1.29 0.011021 0.03346
GO:0000155 phosphorelay sensor kinase activity 1.37% (1/73) 6.35 0.012196 0.036372
GO:0004673 protein histidine kinase activity 1.37% (1/73) 6.28 0.012796 0.037498
GO:0016775 phosphotransferase activity, nitrogenous group as acceptor 1.37% (1/73) 6.28 0.012796 0.037498
GO:0030198 extracellular matrix organization 1.37% (1/73) 6.2 0.013515 0.038929
GO:0043062 extracellular structure organization 1.37% (1/73) 6.2 0.013515 0.038929
GO:0098588 bounding membrane of organelle 4.11% (3/73) 2.6 0.013678 0.039063
GO:0017119 Golgi transport complex 1.37% (1/73) 6.09 0.014594 0.041328
GO:0050789 regulation of biological process 12.33% (9/73) 1.22 0.014818 0.041614
GO:0012507 ER to Golgi transport vesicle membrane 1.37% (1/73) 6.0 0.015551 0.042957
GO:0030662 coated vesicle membrane 1.37% (1/73) 6.0 0.015551 0.042957
GO:0030658 transport vesicle membrane 1.37% (1/73) 5.95 0.016029 0.043918
GO:0090630 activation of GTPase activity 1.37% (1/73) 5.91 0.016508 0.044864
GO:0032934 sterol binding 1.37% (1/73) 5.83 0.017463 0.046707
GO:0005496 steroid binding 1.37% (1/73) 5.83 0.017463 0.046707
GO:0016787 hydrolase activity 12.33% (9/73) 1.17 0.018193 0.048276
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (73) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms