Coexpression cluster: Cluster_558 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0035514 DNA demethylase activity 5.05% (5/99) 7.67 0.0 0.0
GO:0035510 DNA dealkylation 5.05% (5/99) 7.48 0.0 0.0
GO:0080111 DNA demethylation 5.05% (5/99) 7.77 0.0 0.0
GO:0019104 DNA N-glycosylase activity 5.05% (5/99) 6.79 0.0 0.0
GO:0006304 DNA modification 5.05% (5/99) 6.54 0.0 0.0
GO:0070988 demethylation 5.05% (5/99) 6.57 0.0 0.0
GO:0032451 demethylase activity 5.05% (5/99) 5.81 0.0 2e-06
GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds 5.05% (5/99) 5.39 0.0 7e-06
GO:0140640 catalytic activity, acting on a nucleic acid 12.12% (12/99) 2.59 1e-06 3.1e-05
GO:0004057 arginyl-tRNA--protein transferase activity 2.02% (2/99) 10.25 1e-06 3.8e-05
GO:0016598 protein arginylation 2.02% (2/99) 10.25 1e-06 3.8e-05
GO:0006429 leucyl-tRNA aminoacylation 3.03% (3/99) 7.14 1e-06 3.9e-05
GO:0004823 leucine-tRNA ligase activity 3.03% (3/99) 7.14 1e-06 3.9e-05
GO:0006418 tRNA aminoacylation for protein translation 5.05% (5/99) 4.47 4e-06 8.9e-05
GO:0043039 tRNA aminoacylation 5.05% (5/99) 4.44 4e-06 9.3e-05
GO:0043038 amino acid activation 5.05% (5/99) 4.39 5e-06 0.000102
GO:0090304 nucleic acid metabolic process 15.15% (15/99) 1.92 9e-06 0.00019
GO:0062197 cellular response to chemical stress 3.03% (3/99) 6.12 1.2e-05 0.000211
GO:0000302 response to reactive oxygen species 3.03% (3/99) 6.15 1.2e-05 0.000212
GO:0034599 cellular response to oxidative stress 3.03% (3/99) 6.16 1.1e-05 0.000218
GO:0015292 uniporter activity 2.02% (2/99) 8.18 2.3e-05 0.000375
GO:0140101 catalytic activity, acting on a tRNA 5.05% (5/99) 3.8 3.4e-05 0.000529
GO:0005262 calcium channel activity 2.02% (2/99) 7.46 6.3e-05 0.000892
GO:0006139 nucleobase-containing compound metabolic process 15.15% (15/99) 1.69 6.1e-05 0.000902
GO:0070209 ASTRA complex 2.02% (2/99) 7.32 7.6e-05 0.000962
GO:0042743 hydrogen peroxide metabolic process 3.03% (3/99) 5.26 7.3e-05 0.000963
GO:0042744 hydrogen peroxide catabolic process 3.03% (3/99) 5.26 7.3e-05 0.000963
GO:0036444 calcium import into the mitochondrion 2.02% (2/99) 7.14 9.7e-05 0.000979
GO:1990246 uniplex complex 2.02% (2/99) 7.14 9.7e-05 0.000979
GO:0051560 mitochondrial calcium ion homeostasis 2.02% (2/99) 7.14 9.7e-05 0.000979
GO:0006851 mitochondrial calcium ion transmembrane transport 2.02% (2/99) 7.14 9.7e-05 0.000979
GO:0034702 monoatomic ion channel complex 2.02% (2/99) 7.08 0.000107 0.000985
GO:0034703 cation channel complex 2.02% (2/99) 7.08 0.000107 0.000985
GO:0034704 calcium channel complex 2.02% (2/99) 7.11 0.000102 0.000996
GO:0004812 aminoacyl-tRNA ligase activity 4.04% (4/99) 4.14 8.6e-05 0.001016
GO:0016875 ligase activity, forming carbon-oxygen bonds 4.04% (4/99) 4.14 8.6e-05 0.001016
GO:0070887 cellular response to chemical stimulus 3.03% (3/99) 5.15 9.1e-05 0.001035
GO:0072593 reactive oxygen species metabolic process 3.03% (3/99) 5.0 0.000125 0.001126
GO:0046483 heterocycle metabolic process 15.15% (15/99) 1.59 0.00013 0.001141
GO:0055087 Ski complex 2.02% (2/99) 6.91 0.000134 0.001148
GO:0006399 tRNA metabolic process 5.05% (5/99) 3.33 0.000155 0.00129
GO:0140098 catalytic activity, acting on RNA 7.07% (7/99) 2.6 0.000169 0.001345
GO:0006725 cellular aromatic compound metabolic process 15.15% (15/99) 1.56 0.000167 0.00136
GO:1901360 organic cyclic compound metabolic process 15.15% (15/99) 1.51 0.000228 0.001773
GO:0034641 cellular nitrogen compound metabolic process 15.15% (15/99) 1.5 0.000249 0.00189
GO:0051879 Hsp90 protein binding 2.02% (2/99) 6.43 0.000261 0.001942
GO:0043170 macromolecule metabolic process 23.23% (23/99) 1.09 0.00034 0.002471
GO:0006278 RNA-templated DNA biosynthetic process 2.02% (2/99) 6.01 0.000463 0.003231
GO:0007004 telomere maintenance via telomerase 2.02% (2/99) 6.01 0.000463 0.003231
GO:0016874 ligase activity 5.05% (5/99) 2.95 0.000519 0.003479
GO:0034660 ncRNA metabolic process 6.06% (6/99) 2.59 0.000517 0.003538
GO:1901700 response to oxygen-containing compound 3.03% (3/99) 4.27 0.000547 0.003595
GO:0034427 nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' 2.02% (2/99) 5.81 0.00061 0.003934
GO:0050821 protein stabilization 2.02% (2/99) 5.75 0.000661 0.004186
GO:0010833 telomere maintenance via telomere lengthening 2.02% (2/99) 5.73 0.000684 0.004256
GO:0031647 regulation of protein stability 2.02% (2/99) 5.61 0.000808 0.004933
GO:0031305 obsolete integral component of mitochondrial inner membrane 2.02% (2/99) 5.55 0.00088 0.005279
GO:0000291 nuclear-transcribed mRNA catabolic process, exonucleolytic 2.02% (2/99) 5.51 0.000927 0.005468
GO:0006520 amino acid metabolic process 5.05% (5/99) 2.71 0.001069 0.006197
GO:0140097 catalytic activity, acting on DNA 5.05% (5/99) 2.7 0.001118 0.006371
GO:0006259 DNA metabolic process 7.07% (7/99) 2.14 0.00114 0.006392
GO:0016684 oxidoreductase activity, acting on peroxide as acceptor 3.03% (3/99) 3.79 0.001417 0.007575
GO:0004601 peroxidase activity 3.03% (3/99) 3.79 0.001417 0.007575
GO:0031072 heat shock protein binding 2.02% (2/99) 5.18 0.00145 0.007631
GO:0006807 nitrogen compound metabolic process 23.23% (23/99) 0.95 0.001414 0.007799
GO:0006284 base-excision repair 2.02% (2/99) 5.13 0.001545 0.007888
GO:1902495 transmembrane transporter complex 2.02% (2/99) 5.13 0.001545 0.007888
GO:0051539 4 iron, 4 sulfur cluster binding 2.02% (2/99) 5.11 0.001598 0.008039
GO:0016755 aminoacyltransferase activity 4.04% (4/99) 3.01 0.001638 0.00812
GO:1990542 mitochondrial transmembrane transport 2.02% (2/99) 4.98 0.001906 0.008929
GO:0016798 hydrolase activity, acting on glycosyl bonds 5.05% (5/99) 2.52 0.001899 0.00902
GO:0042162 telomeric DNA binding 2.02% (2/99) 4.95 0.001975 0.009125
GO:0006874 intracellular calcium ion homeostasis 2.02% (2/99) 4.98 0.001896 0.009134
GO:0055074 calcium ion homeostasis 2.02% (2/99) 4.98 0.001896 0.009134
GO:0006979 response to oxidative stress 3.03% (3/99) 3.59 0.002091 0.009534
GO:0016209 antioxidant activity 3.03% (3/99) 3.58 0.002126 0.009567
GO:0071897 DNA biosynthetic process 2.02% (2/99) 4.82 0.002356 0.01033
GO:0017056 structural constituent of nuclear pore 2.02% (2/99) 4.82 0.002356 0.01033
GO:1990351 transporter complex 2.02% (2/99) 4.8 0.002432 0.010528
GO:0016070 RNA metabolic process 8.08% (8/99) 1.74 0.002907 0.012428
GO:0070588 calcium ion transmembrane transport 2.02% (2/99) 4.63 0.003042 0.012846
GO:0009507 chloroplast 4.04% (4/99) 2.74 0.003202 0.013355
GO:0071704 organic substance metabolic process 26.26% (26/99) 0.78 0.003327 0.013707
GO:0006816 calcium ion transport 2.02% (2/99) 4.56 0.003378 0.013754
GO:0005643 nuclear pore 2.02% (2/99) 4.51 0.003598 0.014145
GO:0009536 plastid 4.04% (4/99) 2.7 0.003525 0.014182
GO:0044248 cellular catabolic process 5.05% (5/99) 2.31 0.003594 0.014292
GO:0043412 macromolecule modification 13.13% (13/99) 1.22 0.003769 0.014649
GO:0005261 monoatomic cation channel activity 2.02% (2/99) 4.37 0.00434 0.016677
GO:0015085 calcium ion transmembrane transporter activity 2.02% (2/99) 4.36 0.004397 0.01671
GO:0006839 mitochondrial transport 2.02% (2/99) 4.2 0.005429 0.020403
GO:0098800 inner mitochondrial membrane protein complex 2.02% (2/99) 4.13 0.005982 0.022238
GO:0017178 diphthine-ammonia ligase activity 1.01% (1/99) 7.36 0.006078 0.02235
GO:0008152 metabolic process 26.26% (26/99) 0.71 0.006366 0.02316
GO:0003724 RNA helicase activity 2.02% (2/99) 4.06 0.006578 0.023433
GO:0008186 ATP-dependent activity, acting on RNA 2.02% (2/99) 4.06 0.006578 0.023433
GO:0033554 cellular response to stress 5.05% (5/99) 2.06 0.007248 0.025039
GO:0032200 telomere organization 2.02% (2/99) 3.99 0.007217 0.025186
GO:0000723 telomere maintenance 2.02% (2/99) 3.99 0.007217 0.025186
GO:0051540 metal cluster binding 2.02% (2/99) 3.92 0.00794 0.026886
GO:0051536 iron-sulfur cluster binding 2.02% (2/99) 3.92 0.00794 0.026886
GO:0051716 cellular response to stimulus 5.05% (5/99) 2.02 0.008158 0.027354
GO:0098771 inorganic ion homeostasis 2.02% (2/99) 3.85 0.008714 0.028934
GO:0000956 nuclear-transcribed mRNA catabolic process 2.02% (2/99) 3.78 0.00952 0.031308
GO:0044237 cellular metabolic process 20.2% (20/99) 0.78 0.010406 0.033894
GO:0097159 organic cyclic compound binding 23.23% (23/99) 0.69 0.012163 0.038875
GO:0005198 structural molecule activity 3.03% (3/99) 2.67 0.012148 0.039193
GO:0044238 primary metabolic process 23.23% (23/99) 0.69 0.012501 0.039588
GO:0042221 response to chemical 3.03% (3/99) 2.63 0.012963 0.040674
GO:0098798 mitochondrial protein-containing complex 2.02% (2/99) 3.48 0.01417 0.044056
GO:0006402 mRNA catabolic process 2.02% (2/99) 3.47 0.014367 0.044266
GO:0018202 peptidyl-histidine modification 1.01% (1/99) 6.01 0.015369 0.045312
GO:0017183 protein histidyl modification to diphthamide 1.01% (1/99) 6.01 0.015369 0.045312
GO:0006082 organic acid metabolic process 5.05% (5/99) 1.79 0.015358 0.046074
GO:0019752 carboxylic acid metabolic process 5.05% (5/99) 1.79 0.015142 0.046236
GO:0030003 intracellular monoatomic cation homeostasis 2.02% (2/99) 3.39 0.015829 0.046271
GO:0043436 oxoacid metabolic process 5.05% (5/99) 1.79 0.01531 0.046338
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (99) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms