Coexpression cluster: Cluster_754 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0034660 ncRNA metabolic process 13.54% (13/96) 3.75 0.0 0.0
GO:0034470 ncRNA processing 12.5% (12/96) 4.12 0.0 0.0
GO:0034511 U3 snoRNA binding 5.21% (5/96) 7.87 0.0 0.0
GO:0030688 preribosome, small subunit precursor 5.21% (5/96) 8.05 0.0 0.0
GO:0006139 nucleobase-containing compound metabolic process 23.96% (23/96) 2.35 0.0 0.0
GO:0006396 RNA processing 13.54% (13/96) 3.49 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 25.0% (24/96) 2.23 0.0 0.0
GO:0046483 heterocycle metabolic process 23.96% (23/96) 2.25 0.0 0.0
GO:0000479 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 5.21% (5/96) 7.2 0.0 0.0
GO:0006725 cellular aromatic compound metabolic process 23.96% (23/96) 2.22 0.0 0.0
GO:1901360 organic cyclic compound metabolic process 23.96% (23/96) 2.18 0.0 0.0
GO:0090304 nucleic acid metabolic process 20.83% (20/96) 2.38 0.0 0.0
GO:0042254 ribosome biogenesis 5.21% (5/96) 6.77 0.0 0.0
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 5.21% (5/96) 6.55 0.0 0.0
GO:0030515 snoRNA binding 5.21% (5/96) 6.18 0.0 0.0
GO:0030488 tRNA methylation 5.21% (5/96) 6.13 0.0 0.0
GO:0030490 maturation of SSU-rRNA 5.21% (5/96) 6.13 0.0 0.0
GO:0016070 RNA metabolic process 15.62% (15/96) 2.69 0.0 0.0
GO:0003924 GTPase activity 7.29% (7/96) 4.39 0.0 1e-06
GO:0032561 guanyl ribonucleotide binding 7.29% (7/96) 4.33 0.0 1e-06
GO:0005525 GTP binding 7.29% (7/96) 4.33 0.0 1e-06
GO:0022613 ribonucleoprotein complex biogenesis 5.21% (5/96) 5.59 0.0 2e-06
GO:0019001 guanyl nucleotide binding 7.29% (7/96) 4.29 0.0 2e-06
GO:0006364 rRNA processing 7.29% (7/96) 4.22 0.0 2e-06
GO:0016072 rRNA metabolic process 7.29% (7/96) 4.11 0.0 4e-06
GO:0009051 pentose-phosphate shunt, oxidative branch 3.12% (3/96) 7.89 0.0 5e-06
GO:0004345 glucose-6-phosphate dehydrogenase activity 3.12% (3/96) 7.86 0.0 5e-06
GO:0001510 RNA methylation 5.21% (5/96) 5.08 0.0 7e-06
GO:0006400 tRNA modification 5.21% (5/96) 4.85 1e-06 1.6e-05
GO:0032259 methylation 6.25% (6/96) 4.0 2e-06 3.5e-05
GO:0006740 NADPH regeneration 3.12% (3/96) 6.75 3e-06 4.6e-05
GO:0008033 tRNA processing 5.21% (5/96) 4.48 4e-06 4.6e-05
GO:0044237 cellular metabolic process 29.17% (28/96) 1.31 3e-06 4.7e-05
GO:0030684 preribosome 5.21% (5/96) 4.41 4e-06 5.8e-05
GO:0006399 tRNA metabolic process 6.25% (6/96) 3.64 1e-05 0.000126
GO:0043414 macromolecule methylation 5.21% (5/96) 4.13 1.1e-05 0.000139
GO:0017111 ribonucleoside triphosphate phosphatase activity 8.33% (8/96) 2.92 1.2e-05 0.000144
GO:0006739 NADP metabolic process 3.12% (3/96) 6.1 1.3e-05 0.000149
GO:0044085 cellular component biogenesis 5.21% (5/96) 4.07 1.4e-05 0.000155
GO:0051156 glucose 6-phosphate metabolic process 3.12% (3/96) 6.0 1.6e-05 0.000173
GO:0016462 pyrophosphatase activity 8.33% (8/96) 2.82 2e-05 0.000211
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 8.33% (8/96) 2.8 2.2e-05 0.000232
GO:0016817 hydrolase activity, acting on acid anhydrides 8.33% (8/96) 2.78 2.4e-05 0.000242
GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 2.08% (2/96) 7.94 3.2e-05 0.000317
GO:0008152 metabolic process 32.29% (31/96) 1.01 6.3e-05 0.000609
GO:0050661 NADP binding 3.12% (3/96) 5.04 0.000115 0.001088
GO:0006807 nitrogen compound metabolic process 26.04% (25/96) 1.11 0.00014 0.001302
GO:0044238 primary metabolic process 29.17% (28/96) 1.02 0.000146 0.001329
GO:0071704 organic substance metabolic process 30.21% (29/96) 0.98 0.000167 0.001483
GO:0006006 glucose metabolic process 3.12% (3/96) 4.81 0.000183 0.001598
GO:1990904 ribonucleoprotein complex 6.25% (6/96) 2.86 0.000192 0.001642
GO:0043170 macromolecule metabolic process 23.96% (23/96) 1.14 0.00021 0.001763
GO:0009451 RNA modification 5.21% (5/96) 3.08 0.000341 0.002803
GO:0000460 maturation of 5.8S rRNA 2.08% (2/96) 6.16 0.000378 0.003049
GO:0007064 mitotic sister chromatid cohesion 2.08% (2/96) 6.03 0.000454 0.003599
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 2.08% (2/96) 6.0 0.000473 0.003618
GO:0002098 tRNA wobble uridine modification 2.08% (2/96) 6.0 0.000473 0.003618
GO:0032991 protein-containing complex 13.54% (13/96) 1.55 0.000492 0.003696
GO:0002097 tRNA wobble base modification 2.08% (2/96) 5.82 0.0006 0.004435
GO:0019318 hexose metabolic process 3.12% (3/96) 4.18 0.000651 0.004733
GO:0009987 cellular process 32.29% (31/96) 0.81 0.000789 0.005641
GO:0006281 DNA repair 5.21% (5/96) 2.74 0.00098 0.006892
GO:0033554 cellular response to stress 6.25% (6/96) 2.37 0.001148 0.007943
GO:0005996 monosaccharide metabolic process 3.12% (3/96) 3.84 0.001284 0.008744
GO:0051716 cellular response to stimulus 6.25% (6/96) 2.33 0.00133 0.008789
GO:0003723 RNA binding 8.33% (8/96) 1.92 0.001317 0.008833
GO:0006974 DNA damage response 5.21% (5/96) 2.61 0.001469 0.009561
GO:0003676 nucleic acid binding 15.62% (15/96) 1.25 0.001495 0.009584
GO:0000470 maturation of LSU-rRNA 2.08% (2/96) 5.13 0.001547 0.009773
GO:0019362 pyridine nucleotide metabolic process 3.12% (3/96) 3.7 0.001691 0.010387
GO:0046496 nicotinamide nucleotide metabolic process 3.12% (3/96) 3.7 0.001672 0.010412
GO:0007062 sister chromatid cohesion 2.08% (2/96) 5.01 0.001831 0.011086
GO:0072524 pyridine-containing compound metabolic process 3.12% (3/96) 3.63 0.001933 0.011546
GO:0071840 cellular component organization or biogenesis 9.38% (9/96) 1.67 0.002177 0.012827
GO:1901265 nucleoside phosphate binding 15.62% (15/96) 1.1 0.003912 0.022442
GO:0000166 nucleotide binding 15.62% (15/96) 1.1 0.003912 0.022442
GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity 1.04% (1/96) 7.91 0.004145 0.023472
GO:0043226 organelle 16.67% (16/96) 1.03 0.004686 0.025862
GO:0043229 intracellular organelle 16.67% (16/96) 1.03 0.004681 0.026168
GO:0019637 organophosphate metabolic process 5.21% (5/96) 2.2 0.00493 0.026871
GO:1901363 heterocyclic compound binding 15.62% (15/96) 1.06 0.005023 0.027036
GO:0036094 small molecule binding 15.62% (15/96) 1.06 0.005339 0.028387
GO:0044877 protein-containing complex binding 4.17% (4/96) 2.51 0.005613 0.029487
GO:0006091 generation of precursor metabolites and energy 3.12% (3/96) 3.03 0.006126 0.031796
GO:0016787 hydrolase activity 12.5% (12/96) 1.19 0.006311 0.032373
GO:0006875 obsolete intracellular metal ion homeostasis 1.04% (1/96) 7.12 0.007164 0.035494
GO:0004609 phosphatidylserine decarboxylase activity 1.04% (1/96) 7.12 0.007164 0.035494
GO:0043132 NAD transport 1.04% (1/96) 7.15 0.007005 0.035515
GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor 1.04% (1/96) 6.88 0.008432 0.039111
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 3.12% (3/96) 2.89 0.008022 0.039298
GO:0019915 lipid storage 1.04% (1/96) 6.94 0.008115 0.039314
GO:0043021 ribonucleoprotein complex binding 2.08% (2/96) 3.87 0.00842 0.039476
GO:0008150 biological_process 39.58% (38/96) 0.51 0.008395 0.039785
GO:0097159 organic cyclic compound binding 23.96% (23/96) 0.74 0.008361 0.04006
GO:0000785 chromatin 2.08% (2/96) 3.81 0.009131 0.041908
GO:0005634 nucleus 9.38% (9/96) 1.34 0.009282 0.042154
GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway 1.04% (1/96) 6.7 0.009541 0.042883
GO:0070125 mitochondrial translational elongation 1.04% (1/96) 6.66 0.009857 0.043854
GO:1901135 carbohydrate derivative metabolic process 4.17% (4/96) 2.25 0.010315 0.044973
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors 3.12% (3/96) 2.75 0.010297 0.045349
GO:0042797 tRNA transcription by RNA polymerase III 1.04% (1/96) 6.52 0.010806 0.04619
GO:0009304 tRNA transcription 1.04% (1/96) 6.52 0.010806 0.04619
GO:0008097 5S rRNA binding 1.04% (1/96) 6.5 0.010964 0.04641
GO:0005575 cellular_component 30.21% (29/96) 0.6 0.011284 0.047306
GO:0005829 cytosol 5.21% (5/96) 1.88 0.012115 0.04983
GO:0006163 purine nucleotide metabolic process 3.12% (3/96) 2.67 0.012002 0.049835
GO:0034272 phosphatidylinositol 3-kinase complex, class III, type II 1.04% (1/96) 6.33 0.012385 0.049999
GO:0034271 phosphatidylinositol 3-kinase complex, class III, type I 1.04% (1/96) 6.33 0.012385 0.049999
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (96) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms