Coexpression cluster: Cluster_10139 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0033015 tetrapyrrole catabolic process 50.0% (1/2) 11.8 0.00028 0.004426
GO:0046149 pigment catabolic process 50.0% (1/2) 11.8 0.00028 0.004426
GO:0015996 chlorophyll catabolic process 50.0% (1/2) 11.8 0.00028 0.004426
GO:0006787 porphyrin-containing compound catabolic process 50.0% (1/2) 11.8 0.00028 0.004426
GO:0051743 red chlorophyll catabolite reductase activity 50.0% (1/2) 13.74 7.3e-05 0.006956
GO:0042555 MCM complex 50.0% (1/2) 10.24 0.000829 0.007871
GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor 50.0% (1/2) 12.5 0.000173 0.00822
GO:0015994 chlorophyll metabolic process 50.0% (1/2) 10.31 0.000789 0.008324
GO:0017116 single-stranded DNA helicase activity 50.0% (1/2) 10.39 0.000745 0.008851
GO:0043138 3'-5' DNA helicase activity 50.0% (1/2) 9.84 0.001088 0.009397
GO:0000727 double-strand break repair via break-induced replication 50.0% (1/2) 10.4 0.000742 0.010071
GO:0006270 DNA replication initiation 50.0% (1/2) 9.51 0.001371 0.010852
GO:0042440 pigment metabolic process 50.0% (1/2) 9.21 0.001687 0.011445
GO:0033013 tetrapyrrole metabolic process 50.0% (1/2) 9.07 0.00186 0.011777
GO:0032392 DNA geometric change 50.0% (1/2) 8.89 0.002112 0.011804
GO:0032508 DNA duplex unwinding 50.0% (1/2) 8.89 0.002112 0.011804
GO:0006778 porphyrin-containing compound metabolic process 50.0% (1/2) 9.24 0.00165 0.012058
GO:0034641 cellular nitrogen compound metabolic process 100.0% (2/2) 4.23 0.002857 0.012336
GO:0071103 DNA conformation change 50.0% (1/2) 8.37 0.003026 0.0125
GO:1901360 organic cyclic compound metabolic process 100.0% (2/2) 4.24 0.002811 0.012716
GO:0006725 cellular aromatic compound metabolic process 100.0% (2/2) 4.28 0.002653 0.013265
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors 50.0% (1/2) 8.48 0.002794 0.01327
GO:0046483 heterocycle metabolic process 100.0% (2/2) 4.31 0.002534 0.013373
GO:0003678 DNA helicase activity 50.0% (1/2) 8.13 0.003568 0.014123
GO:0003697 single-stranded DNA binding 50.0% (1/2) 7.95 0.00405 0.014249
GO:0000724 double-strand break repair via homologous recombination 50.0% (1/2) 8.03 0.003824 0.01453
GO:0000725 recombinational repair 50.0% (1/2) 7.96 0.004023 0.0147
GO:0043227 membrane-bounded organelle 100.0% (2/2) 3.82 0.004993 0.016358
GO:0043231 intracellular membrane-bounded organelle 100.0% (2/2) 3.83 0.004919 0.016689
GO:0006302 double-strand break repair 50.0% (1/2) 7.42 0.005812 0.018406
GO:0006310 DNA recombination 50.0% (1/2) 7.2 0.006795 0.01956
GO:0043226 organelle 100.0% (2/2) 3.62 0.006651 0.019745
GO:0043229 intracellular organelle 100.0% (2/2) 3.62 0.00665 0.020378
GO:0004386 helicase activity 50.0% (1/2) 7.02 0.007687 0.021477
GO:0008094 ATP-dependent activity, acting on DNA 50.0% (1/2) 6.92 0.008234 0.022348
GO:0046700 heterocycle catabolic process 50.0% (1/2) 6.83 0.00877 0.022519
GO:0044270 cellular nitrogen compound catabolic process 50.0% (1/2) 6.83 0.00877 0.022519
GO:0051276 chromosome organization 50.0% (1/2) 6.75 0.009291 0.023226
GO:1901361 organic cyclic compound catabolic process 50.0% (1/2) 6.63 0.010039 0.023843
GO:0019439 aromatic compound catabolic process 50.0% (1/2) 6.66 0.009867 0.024035
GO:0009507 chloroplast 50.0% (1/2) 6.37 0.012075 0.027978
GO:0009536 plastid 50.0% (1/2) 6.33 0.012405 0.02806
GO:0044237 cellular metabolic process 100.0% (2/2) 3.09 0.01375 0.030379
GO:0006281 DNA repair 50.0% (1/2) 6.0 0.015545 0.031421
GO:0006807 nitrogen compound metabolic process 100.0% (2/2) 3.05 0.014562 0.03144
GO:0140097 catalytic activity, acting on DNA 50.0% (1/2) 6.0 0.015522 0.032056
GO:1901565 organonitrogen compound catabolic process 50.0% (1/2) 6.02 0.015307 0.032315
GO:0006974 DNA damage response 50.0% (1/2) 5.87 0.01704 0.033725
GO:0044248 cellular catabolic process 50.0% (1/2) 5.61 0.020327 0.03941
GO:0071704 organic substance metabolic process 100.0% (2/2) 2.71 0.023373 0.044409
GO:0033554 cellular response to stress 50.0% (1/2) 5.37 0.024053 0.044804
GO:0051716 cellular response to stimulus 50.0% (1/2) 5.33 0.02476 0.045234
GO:0008152 metabolic process 100.0% (2/2) 2.64 0.025737 0.046132
GO:0006996 organelle organization 50.0% (1/2) 5.15 0.028057 0.049359
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms