Coexpression cluster: Cluster_323 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0036228 protein localization to nuclear inner membrane 3.4% (5/147) 9.27 0.0 0.0
GO:0090435 protein localization to nuclear envelope 3.4% (5/147) 9.27 0.0 0.0
GO:0044611 nuclear pore inner ring 3.4% (5/147) 8.19 0.0 0.0
GO:0017056 structural constituent of nuclear pore 4.76% (7/147) 6.06 0.0 0.0
GO:0005643 nuclear pore 4.76% (7/147) 5.75 0.0 0.0
GO:0000972 transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery 3.4% (5/147) 6.98 0.0 0.0
GO:0050657 nucleic acid transport 4.76% (7/147) 5.16 0.0 0.0
GO:0051236 establishment of RNA localization 4.76% (7/147) 5.16 0.0 0.0
GO:0050658 RNA transport 4.76% (7/147) 5.16 0.0 0.0
GO:0006405 RNA export from nucleus 4.76% (7/147) 5.18 0.0 0.0
GO:0051168 nuclear export 4.76% (7/147) 4.56 0.0 1e-06
GO:0015931 nucleobase-containing compound transport 4.76% (7/147) 4.54 0.0 1e-06
GO:0140513 nuclear protein-containing complex 9.52% (14/147) 2.67 0.0 2e-06
GO:0006357 regulation of transcription by RNA polymerase II 6.8% (10/147) 3.36 0.0 2e-06
GO:0003712 transcription coregulator activity 4.76% (7/147) 4.28 0.0 3e-06
GO:0006913 nucleocytoplasmic transport 4.76% (7/147) 4.13 0.0 6e-06
GO:0051169 nuclear transport 4.76% (7/147) 4.13 0.0 6e-06
GO:0051170 import into nucleus 3.4% (5/147) 4.92 1e-06 2e-05
GO:0006606 protein import into nucleus 3.4% (5/147) 4.94 1e-06 2e-05
GO:0034504 protein localization to nucleus 3.4% (5/147) 4.94 1e-06 2e-05
GO:0072594 establishment of protein localization to organelle 4.76% (7/147) 3.74 1e-06 2.8e-05
GO:0032991 protein-containing complex 14.97% (22/147) 1.69 1e-06 2.8e-05
GO:0033365 protein localization to organelle 4.76% (7/147) 3.62 2e-06 4.3e-05
GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity 2.04% (3/147) 6.66 4e-06 8.2e-05
GO:0072657 protein localization to membrane 3.4% (5/147) 4.42 4e-06 8.5e-05
GO:0015101 organic cation transmembrane transporter activity 2.04% (3/147) 6.53 5e-06 0.0001
GO:0005198 structural molecule activity 4.76% (7/147) 3.32 8e-06 0.000143
GO:0046907 intracellular transport 6.12% (9/147) 2.72 1.1e-05 0.000194
GO:0071561 nucleus-vacuole junction 1.36% (2/147) 8.6 1.2e-05 0.000208
GO:0044232 organelle membrane contact site 1.36% (2/147) 8.54 1.4e-05 0.000221
GO:0051649 establishment of localization in cell 6.12% (9/147) 2.67 1.5e-05 0.000228
GO:0051668 localization within membrane 3.4% (5/147) 3.98 1.9e-05 0.000285
GO:1901682 sulfur compound transmembrane transporter activity 2.04% (3/147) 5.45 4.9e-05 0.000724
GO:0031966 mitochondrial membrane 2.72% (4/147) 4.34 5.2e-05 0.000733
GO:0030242 autophagy of peroxisome 1.36% (2/147) 7.44 6.4e-05 0.000882
GO:0003690 double-stranded DNA binding 4.76% (7/147) 2.7 0.00012 0.001609
GO:0003674 molecular_function 50.34% (74/147) 0.51 0.000138 0.001803
GO:0051641 cellular localization 6.12% (9/147) 2.21 0.000167 0.002132
GO:0034271 phosphatidylinositol 3-kinase complex, class III, type I 1.36% (2/147) 6.71 0.000176 0.002133
GO:0034272 phosphatidylinositol 3-kinase complex, class III, type II 1.36% (2/147) 6.71 0.000176 0.002133
GO:0045184 establishment of protein localization 4.76% (7/147) 2.51 0.000263 0.003029
GO:0005743 mitochondrial inner membrane 2.04% (3/147) 4.64 0.000258 0.003041
GO:0004386 helicase activity 3.4% (5/147) 3.14 0.000286 0.003223
GO:0016592 mediator complex 2.04% (3/147) 4.56 0.000306 0.003369
GO:0035032 phosphatidylinositol 3-kinase complex, class III 1.36% (2/147) 6.24 0.000338 0.003552
GO:0005942 phosphatidylinositol 3-kinase complex 1.36% (2/147) 6.24 0.000338 0.003552
GO:0033036 macromolecule localization 4.76% (7/147) 2.35 0.000513 0.00497
GO:0070727 cellular macromolecule localization 4.76% (7/147) 2.35 0.000508 0.005014
GO:0019866 organelle inner membrane 2.04% (3/147) 4.31 0.000508 0.005118
GO:0008104 protein localization 4.76% (7/147) 2.35 0.000501 0.005157
GO:0051276 chromosome organization 3.4% (5/147) 2.87 0.000674 0.006397
GO:2001141 regulation of RNA biosynthetic process 7.48% (11/147) 1.68 0.000727 0.006635
GO:0006355 regulation of DNA-templated transcription 7.48% (11/147) 1.68 0.000727 0.006635
GO:0051252 regulation of RNA metabolic process 7.48% (11/147) 1.61 0.001086 0.009733
GO:0006886 intracellular protein transport 3.4% (5/147) 2.66 0.001259 0.010693
GO:0009941 chloroplast envelope 2.04% (3/147) 3.85 0.001253 0.010827
GO:0009526 plastid envelope 2.04% (3/147) 3.85 0.001253 0.010827
GO:0019219 regulation of nucleobase-containing compound metabolic process 7.48% (11/147) 1.55 0.001483 0.011767
GO:0071705 nitrogen compound transport 4.76% (7/147) 2.08 0.001473 0.011884
GO:0031410 cytoplasmic vesicle 2.72% (4/147) 3.03 0.001552 0.011922
GO:0097708 intracellular vesicle 2.72% (4/147) 3.03 0.001552 0.011922
GO:0016236 macroautophagy 1.36% (2/147) 5.18 0.001445 0.012058
GO:0005575 cellular_component 30.61% (45/147) 0.61 0.001472 0.012076
GO:0005488 binding 33.33% (49/147) 0.56 0.001827 0.013606
GO:1990904 ribonucleoprotein complex 4.08% (6/147) 2.25 0.00181 0.013685
GO:0071011 precatalytic spliceosome 1.36% (2/147) 4.97 0.001934 0.014186
GO:0006623 protein targeting to vacuole 1.36% (2/147) 4.94 0.002008 0.014504
GO:0010468 regulation of gene expression 8.16% (12/147) 1.4 0.002125 0.015122
GO:0010556 regulation of macromolecule biosynthetic process 8.16% (12/147) 1.39 0.002245 0.015749
GO:0004177 aminopeptidase activity 1.36% (2/147) 4.84 0.002314 0.016001
GO:0009889 regulation of biosynthetic process 8.16% (12/147) 1.37 0.002608 0.016831
GO:0031975 envelope 2.04% (3/147) 3.5 0.002516 0.016911
GO:0031967 organelle envelope 2.04% (3/147) 3.5 0.002516 0.016911
GO:0031326 regulation of cellular biosynthetic process 8.16% (12/147) 1.37 0.002593 0.016957
GO:0005770 late endosome 1.36% (2/147) 4.76 0.002558 0.016958
GO:0140110 transcription regulator activity 5.44% (8/147) 1.77 0.002686 0.017106
GO:0050832 defense response to fungus 2.72% (4/147) 2.79 0.002891 0.017939
GO:0009620 response to fungus 2.72% (4/147) 2.79 0.002891 0.017939
GO:0031982 vesicle 2.72% (4/147) 2.77 0.002965 0.018167
GO:0000112 nucleotide-excision repair factor 3 complex 0.68% (1/147) 8.3 0.003175 0.019211
GO:0015031 protein transport 3.4% (5/147) 2.33 0.00341 0.020375
GO:0003676 nucleic acid binding 12.93% (19/147) 0.98 0.003721 0.021966
GO:0051171 regulation of nitrogen compound metabolic process 7.48% (11/147) 1.37 0.003842 0.022401
GO:0080090 regulation of primary metabolic process 7.48% (11/147) 1.36 0.00412 0.023739
GO:0003677 DNA binding 7.48% (11/147) 1.35 0.004385 0.024968
GO:0060255 regulation of macromolecule metabolic process 8.16% (12/147) 1.26 0.004633 0.026075
GO:0031323 regulation of cellular metabolic process 8.16% (12/147) 1.25 0.004856 0.027016
GO:0071702 organic substance transport 4.76% (7/147) 1.75 0.005114 0.028125
GO:0005768 endosome 2.04% (3/147) 3.09 0.005533 0.029428
GO:0045324 late endosome to vacuole transport 1.36% (2/147) 4.21 0.005422 0.029484
GO:0097159 organic cyclic compound binding 22.45% (33/147) 0.64 0.005498 0.029569
GO:0006406 mRNA export from nucleus 1.36% (2/147) 4.13 0.006028 0.030389
GO:0051028 mRNA transport 1.36% (2/147) 4.13 0.006028 0.030389
GO:0019222 regulation of metabolic process 8.16% (12/147) 1.21 0.006194 0.030905
GO:0072665 protein localization to vacuole 1.36% (2/147) 4.13 0.006003 0.030908
GO:0072666 establishment of protein localization to vacuole 1.36% (2/147) 4.13 0.006003 0.030908
GO:0006413 translational initiation 1.36% (2/147) 4.14 0.005929 0.03119
GO:0006914 autophagy 1.36% (2/147) 4.0 0.007138 0.034898
GO:0061919 process utilizing autophagic mechanism 1.36% (2/147) 4.0 0.007138 0.034898
GO:0017007 protein-bilin linkage 0.68% (1/147) 7.09 0.007313 0.035044
GO:0017009 protein-phycocyanobilin linkage 0.68% (1/147) 7.09 0.007313 0.035044
GO:0050794 regulation of cellular process 10.2% (15/147) 1.02 0.007595 0.036041
GO:0140096 catalytic activity, acting on a protein 10.88% (16/147) 0.95 0.009092 0.042723
GO:0017006 protein-tetrapyrrole linkage 0.68% (1/147) 6.71 0.009496 0.044194
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 1.36% (2/147) 3.76 0.009767 0.044598
GO:0065007 biological regulation 10.88% (16/147) 0.94 0.009751 0.044949
GO:0003743 translation initiation factor activity 1.36% (2/147) 3.74 0.010079 0.04559
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (147) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms