Coexpression cluster: Cluster_56 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003723 RNA binding 18.18% (14/77) 3.04 0.0 1e-06
GO:0003729 mRNA binding 7.79% (6/77) 3.79 5e-06 0.001468
GO:0032991 protein-containing complex 18.18% (14/77) 1.97 1.1e-05 0.002017
GO:0022627 cytosolic small ribosomal subunit 3.9% (3/77) 5.91 1.9e-05 0.002633
GO:0003676 nucleic acid binding 20.78% (16/77) 1.66 3.5e-05 0.002736
GO:0006413 translational initiation 3.9% (3/77) 5.66 3.2e-05 0.002939
GO:0044391 ribosomal subunit 5.19% (4/77) 4.57 2.7e-05 0.002992
GO:0015935 small ribosomal subunit 3.9% (3/77) 5.48 4.6e-05 0.00316
GO:1990904 ribonucleoprotein complex 7.79% (6/77) 3.18 5.6e-05 0.003447
GO:0003743 translation initiation factor activity 3.9% (3/77) 5.26 7.3e-05 0.003998
GO:0010608 post-transcriptional regulation of gene expression 5.19% (4/77) 4.15 8.4e-05 0.004176
GO:0005575 cellular_component 38.96% (30/77) 0.96 9.9e-05 0.004557
GO:0090079 translation regulator activity, nucleic acid binding 3.9% (3/77) 4.6 0.000277 0.01089
GO:0008135 translation factor activity, RNA binding 3.9% (3/77) 4.6 0.000277 0.01089
GO:0010629 negative regulation of gene expression 5.19% (4/77) 3.66 0.000303 0.01111
GO:0045182 translation regulator activity 3.9% (3/77) 4.42 0.000398 0.012879
GO:0009987 cellular process 35.06% (27/77) 0.93 0.000398 0.013669
GO:0008150 biological_process 45.45% (35/77) 0.71 0.000711 0.021725
GO:0010558 negative regulation of macromolecule biosynthetic process 5.19% (4/77) 3.3 0.000778 0.022523
GO:0009890 negative regulation of biosynthetic process 5.19% (4/77) 3.25 0.000878 0.023
GO:0031327 negative regulation of cellular biosynthetic process 5.19% (4/77) 3.25 0.000864 0.023773
GO:0010605 negative regulation of macromolecule metabolic process 5.19% (4/77) 3.12 0.001209 0.026602
GO:0009892 negative regulation of metabolic process 5.19% (4/77) 3.09 0.001308 0.026647
GO:0000049 tRNA binding 2.6% (2/77) 5.37 0.001119 0.026763
GO:0016071 mRNA metabolic process 5.19% (4/77) 3.17 0.001073 0.026826
GO:0031324 negative regulation of cellular metabolic process 5.19% (4/77) 3.1 0.001282 0.027124
GO:0044237 cellular metabolic process 24.68% (19/77) 1.07 0.001201 0.027526
GO:0140517 protein-RNA adaptor activity 1.3% (1/77) 9.35 0.001537 0.02817
GO:1990247 N6-methyladenosine-containing RNA reader activity 1.3% (1/77) 9.35 0.001537 0.02817
GO:0003735 structural constituent of ribosome 3.9% (3/77) 3.75 0.001518 0.029826
GO:0035194 regulatory ncRNA-mediated post-transcriptional gene silencing 2.6% (2/77) 5.03 0.001783 0.030648
GO:0016441 post-transcriptional gene silencing 2.6% (2/77) 5.03 0.001783 0.030648
GO:0016070 RNA metabolic process 9.09% (7/77) 1.91 0.002704 0.036269
GO:1990573 potassium ion import across plasma membrane 1.3% (1/77) 8.54 0.002687 0.036952
GO:0032216 glucosaminyl-phosphatidylinositol O-acyltransferase activity 1.3% (1/77) 8.54 0.002687 0.036952
GO:0034641 cellular nitrogen compound metabolic process 14.29% (11/77) 1.42 0.002583 0.037379
GO:0055081 monoatomic anion homeostasis 1.3% (1/77) 8.61 0.00256 0.038048
GO:0055064 chloride ion homeostasis 1.3% (1/77) 8.61 0.00256 0.038048
GO:0015379 potassium:chloride symporter activity 1.3% (1/77) 8.61 0.00256 0.038048
GO:0015377 chloride:monoatomic cation symporter activity 1.3% (1/77) 8.61 0.00256 0.038048
GO:0015296 monoatomic anion:monoatomic cation symporter activity 1.3% (1/77) 8.61 0.00256 0.038048
GO:0006884 cell volume homeostasis 1.3% (1/77) 8.41 0.002943 0.038539
GO:0055075 potassium ion homeostasis 1.3% (1/77) 8.35 0.003071 0.039277
GO:0048519 negative regulation of biological process 5.19% (4/77) 2.69 0.003527 0.040418
GO:0048523 negative regulation of cellular process 5.19% (4/77) 2.72 0.003312 0.040481
GO:0043022 ribosome binding 2.6% (2/77) 4.57 0.003298 0.041221
GO:0030674 protein-macromolecule adaptor activity 2.6% (2/77) 4.52 0.003526 0.041267
GO:0005846 nuclear cap binding complex 1.3% (1/77) 8.18 0.003454 0.041297
GO:0008152 metabolic process 28.57% (22/77) 0.83 0.003953 0.044372
GO:1902387 ceramide 1-phosphate binding 1.3% (1/77) 7.35 0.006132 0.047503
GO:0097001 ceramide binding 1.3% (1/77) 7.35 0.006132 0.047503
GO:1902388 ceramide 1-phosphate transfer activity 1.3% (1/77) 7.35 0.006132 0.047503
GO:0120017 ceramide transfer activity 1.3% (1/77) 7.35 0.006132 0.047503
GO:0120016 sphingolipid transfer activity 1.3% (1/77) 7.35 0.006132 0.047503
GO:0035627 ceramide transport 1.3% (1/77) 7.35 0.006132 0.047503
GO:0046624 sphingolipid transporter activity 1.3% (1/77) 7.35 0.006132 0.047503
GO:0046625 sphingolipid binding 1.3% (1/77) 7.35 0.006132 0.047503
GO:0051457 maintenance of protein location in nucleus 1.3% (1/77) 7.84 0.004347 0.047822
GO:0006518 peptide metabolic process 3.9% (3/77) 3.19 0.004501 0.048541
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (77) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms