Coexpression cluster: Cluster_12083 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0004834 tryptophan synthase activity 100.0% (3/3) 13.52 0.0 0.0
GO:0042430 indole-containing compound metabolic process 100.0% (3/3) 11.21 0.0 0.0
GO:0006586 indolalkylamine metabolic process 100.0% (3/3) 11.21 0.0 0.0
GO:0006568 tryptophan metabolic process 100.0% (3/3) 11.21 0.0 0.0
GO:0042435 indole-containing compound biosynthetic process 100.0% (3/3) 11.46 0.0 0.0
GO:0000162 tryptophan biosynthetic process 100.0% (3/3) 11.46 0.0 0.0
GO:0046219 indolalkylamine biosynthetic process 100.0% (3/3) 11.46 0.0 0.0
GO:0009309 amine biosynthetic process 100.0% (3/3) 10.73 0.0 0.0
GO:0042401 biogenic amine biosynthetic process 100.0% (3/3) 10.73 0.0 0.0
GO:0009073 aromatic amino acid family biosynthetic process 100.0% (3/3) 10.49 0.0 0.0
GO:0006576 biogenic amine metabolic process 100.0% (3/3) 10.23 0.0 0.0
GO:0016836 hydro-lyase activity 100.0% (3/3) 9.68 0.0 0.0
GO:0009072 aromatic amino acid metabolic process 100.0% (3/3) 9.6 0.0 0.0
GO:0009308 amine metabolic process 100.0% (3/3) 9.53 0.0 0.0
GO:0016835 carbon-oxygen lyase activity 100.0% (3/3) 8.91 0.0 0.0
GO:1901607 alpha-amino acid biosynthetic process 100.0% (3/3) 8.6 0.0 0.0
GO:0008652 amino acid biosynthetic process 100.0% (3/3) 8.49 0.0 0.0
GO:1901605 alpha-amino acid metabolic process 100.0% (3/3) 7.93 0.0 0.0
GO:0016829 lyase activity 100.0% (3/3) 7.57 0.0 0.0
GO:0046394 carboxylic acid biosynthetic process 100.0% (3/3) 7.58 0.0 0.0
GO:0016053 organic acid biosynthetic process 100.0% (3/3) 7.58 0.0 0.0
GO:0006520 amino acid metabolic process 100.0% (3/3) 7.02 0.0 1e-06
GO:0044283 small molecule biosynthetic process 100.0% (3/3) 7.02 0.0 1e-06
GO:0018130 heterocycle biosynthetic process 100.0% (3/3) 6.51 1e-06 3e-06
GO:0019438 aromatic compound biosynthetic process 100.0% (3/3) 6.43 2e-06 3e-06
GO:1901566 organonitrogen compound biosynthetic process 100.0% (3/3) 6.33 2e-06 4e-06
GO:1901362 organic cyclic compound biosynthetic process 100.0% (3/3) 6.29 2e-06 4e-06
GO:0006082 organic acid metabolic process 100.0% (3/3) 6.1 3e-06 5e-06
GO:0043436 oxoacid metabolic process 100.0% (3/3) 6.1 3e-06 6e-06
GO:0019752 carboxylic acid metabolic process 100.0% (3/3) 6.1 3e-06 6e-06
GO:0044271 cellular nitrogen compound biosynthetic process 100.0% (3/3) 6.04 4e-06 6e-06
GO:0044281 small molecule metabolic process 100.0% (3/3) 5.4 1.3e-05 2.2e-05
GO:0044249 cellular biosynthetic process 100.0% (3/3) 5.05 2.7e-05 4.3e-05
GO:0005737 cytoplasm 100.0% (3/3) 4.96 3.3e-05 5.1e-05
GO:1901576 organic substance biosynthetic process 100.0% (3/3) 4.93 3.5e-05 5.2e-05
GO:0009058 biosynthetic process 100.0% (3/3) 4.86 4.1e-05 5.9e-05
GO:0046483 heterocycle metabolic process 100.0% (3/3) 4.31 0.000128 0.000179
GO:0006725 cellular aromatic compound metabolic process 100.0% (3/3) 4.28 0.000137 0.000187
GO:0034641 cellular nitrogen compound metabolic process 100.0% (3/3) 4.23 0.000153 0.000198
GO:1901360 organic cyclic compound metabolic process 100.0% (3/3) 4.24 0.000149 0.000199
GO:1901564 organonitrogen compound metabolic process 100.0% (3/3) 3.59 0.00057 0.000723
GO:0044237 cellular metabolic process 100.0% (3/3) 3.09 0.001612 0.001996
GO:0006807 nitrogen compound metabolic process 100.0% (3/3) 3.05 0.001757 0.002125
GO:0044238 primary metabolic process 100.0% (3/3) 2.8 0.002981 0.003522
GO:0071704 organic substance metabolic process 100.0% (3/3) 2.71 0.003573 0.004129
GO:0008152 metabolic process 100.0% (3/3) 2.64 0.004129 0.004667
GO:0110165 cellular anatomical entity 100.0% (3/3) 2.5 0.005519 0.006107
GO:0003824 catalytic activity 100.0% (3/3) 2.47 0.005929 0.006423
GO:0009987 cellular process 100.0% (3/3) 2.44 0.006253 0.006635
GO:0005575 cellular_component 100.0% (3/3) 2.32 0.00799 0.00831
GO:0008150 biological_process 100.0% (3/3) 1.85 0.021524 0.021947
GO:0003674 molecular_function 100.0% (3/3) 1.5 0.044202 0.044202
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (3) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms