Coexpression cluster: Cluster_499 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0004674 protein serine/threonine kinase activity 23.21% (13/56) 4.23 0.0 0.0
GO:0004672 protein kinase activity 25.0% (14/56) 2.98 0.0 0.0
GO:0006468 protein phosphorylation 25.0% (14/56) 3.03 0.0 0.0
GO:0035556 intracellular signal transduction 14.29% (8/56) 4.73 0.0 0.0
GO:0016310 phosphorylation 25.0% (14/56) 2.98 0.0 0.0
GO:0140096 catalytic activity, acting on a protein 30.36% (17/56) 2.43 0.0 0.0
GO:0036211 protein modification process 28.57% (16/56) 2.52 0.0 0.0
GO:0016773 phosphotransferase activity, alcohol group as acceptor 25.0% (14/56) 2.82 0.0 0.0
GO:0016301 kinase activity 25.0% (14/56) 2.76 0.0 0.0
GO:0005737 cytoplasm 23.21% (13/56) 2.85 0.0 1e-06
GO:0043412 macromolecule modification 28.57% (16/56) 2.34 0.0 1e-06
GO:0019538 protein metabolic process 30.36% (17/56) 2.23 0.0 1e-06
GO:0016772 transferase activity, transferring phosphorus-containing groups 25.0% (14/56) 2.57 0.0 1e-06
GO:0007165 signal transduction 16.07% (9/56) 3.49 0.0 2e-06
GO:0006796 phosphate-containing compound metabolic process 25.0% (14/56) 2.48 0.0 2e-06
GO:0006793 phosphorus metabolic process 25.0% (14/56) 2.47 0.0 2e-06
GO:0110165 cellular anatomical entity 48.21% (27/56) 1.45 0.0 2e-06
GO:1901564 organonitrogen compound metabolic process 30.36% (17/56) 1.87 2e-06 2.3e-05
GO:0005575 cellular_component 48.21% (27/56) 1.27 2e-06 2.6e-05
GO:0005524 ATP binding 23.21% (13/56) 2.24 3e-06 3.2e-05
GO:0016740 transferase activity 28.57% (16/56) 1.88 3e-06 3.9e-05
GO:0034260 negative regulation of GTPase activity 3.57% (2/56) 9.53 3e-06 4e-05
GO:0050789 regulation of biological process 23.21% (13/56) 2.13 6e-06 5.5e-05
GO:0005634 nucleus 19.64% (11/56) 2.41 6e-06 5.7e-05
GO:0035639 purine ribonucleoside triphosphate binding 23.21% (13/56) 2.13 6e-06 5.9e-05
GO:0051346 negative regulation of hydrolase activity 3.57% (2/56) 8.9 8e-06 7.9e-05
GO:0065007 biological regulation 23.21% (13/56) 2.03 1.2e-05 0.000109
GO:0043170 macromolecule metabolic process 32.14% (18/56) 1.56 1.6e-05 0.000141
GO:0016020 membrane 23.21% (13/56) 1.95 2.2e-05 0.000186
GO:0000036 acyl carrier activity 3.57% (2/56) 7.91 3.3e-05 0.000247
GO:0051192 prosthetic group binding 3.57% (2/56) 7.91 3.3e-05 0.000247
GO:0140414 phosphopantetheine-dependent carrier activity 3.57% (2/56) 7.91 3.3e-05 0.000247
GO:0044620 ACP phosphopantetheine attachment site binding 3.57% (2/56) 7.91 3.3e-05 0.000247
GO:0032559 adenyl ribonucleotide binding 23.21% (13/56) 1.88 3.7e-05 0.000267
GO:0036094 small molecule binding 25.0% (14/56) 1.73 5.2e-05 0.000362
GO:0030554 adenyl nucleotide binding 23.21% (13/56) 1.82 5.5e-05 0.000376
GO:0044238 primary metabolic process 35.71% (20/56) 1.31 5.9e-05 0.00039
GO:0032555 purine ribonucleotide binding 23.21% (13/56) 1.8 6.5e-05 0.000411
GO:0006807 nitrogen compound metabolic process 32.14% (18/56) 1.41 6.4e-05 0.000415
GO:0032553 ribonucleotide binding 23.21% (13/56) 1.78 7.1e-05 0.000435
GO:0097367 carbohydrate derivative binding 23.21% (13/56) 1.77 7.7e-05 0.000459
GO:0017076 purine nucleotide binding 23.21% (13/56) 1.74 9.7e-05 0.00055
GO:0050794 regulation of cellular process 19.64% (11/56) 1.96 9.6e-05 0.000561
GO:0043231 intracellular membrane-bounded organelle 23.21% (13/56) 1.73 0.000106 0.000579
GO:0009611 response to wounding 3.57% (2/56) 7.09 0.000105 0.000584
GO:0043227 membrane-bounded organelle 23.21% (13/56) 1.72 0.000115 0.000585
GO:0018105 peptidyl-serine phosphorylation 5.36% (3/56) 5.03 0.000113 0.000591
GO:0018209 peptidyl-serine modification 5.36% (3/56) 5.03 0.000113 0.000591
GO:0008150 biological_process 51.79% (29/56) 0.9 0.000128 0.000642
GO:0071704 organic substance metabolic process 35.71% (20/56) 1.22 0.000139 0.000681
GO:0000166 nucleotide binding 23.21% (13/56) 1.68 0.000152 0.000703
GO:1901265 nucleoside phosphate binding 23.21% (13/56) 1.68 0.000152 0.000703
GO:2000022 regulation of jasmonic acid mediated signaling pathway 3.57% (2/56) 6.84 0.000147 0.000705
GO:0044237 cellular metabolic process 30.36% (17/56) 1.37 0.000157 0.000713
GO:0043168 anion binding 23.21% (13/56) 1.65 0.000181 0.000806
GO:1901363 heterocyclic compound binding 23.21% (13/56) 1.64 0.000199 0.000871
GO:0009987 cellular process 39.29% (22/56) 1.09 0.000215 0.000922
GO:0048278 vesicle docking 3.57% (2/56) 6.4 0.000272 0.001075
GO:0006906 vesicle fusion 3.57% (2/56) 6.4 0.000272 0.001075
GO:0005484 SNAP receptor activity 3.57% (2/56) 6.43 0.000259 0.001096
GO:0008152 metabolic process 35.71% (20/56) 1.15 0.000271 0.001105
GO:0043086 negative regulation of catalytic activity 3.57% (2/56) 6.41 0.000268 0.001112
GO:0044092 negative regulation of molecular function 3.57% (2/56) 6.36 0.000287 0.001117
GO:0031267 small GTPase binding 3.57% (2/56) 6.29 0.000314 0.001183
GO:0051020 GTPase binding 3.57% (2/56) 6.29 0.000314 0.001183
GO:0043087 regulation of GTPase activity 3.57% (2/56) 6.27 0.000325 0.00119
GO:0031201 SNARE complex 3.57% (2/56) 6.27 0.000325 0.00119
GO:0043226 organelle 23.21% (13/56) 1.51 0.000468 0.00166
GO:0043229 intracellular organelle 23.21% (13/56) 1.51 0.000467 0.001683
GO:0061024 membrane organization 5.36% (3/56) 4.23 0.000577 0.001993
GO:0031347 regulation of defense response 3.57% (2/56) 5.83 0.000591 0.002011
GO:0005488 binding 42.86% (24/56) 0.93 0.000577 0.002019
GO:0051336 regulation of hydrolase activity 3.57% (2/56) 5.77 0.000645 0.002165
GO:0090174 organelle membrane fusion 3.57% (2/56) 5.7 0.000708 0.002344
GO:0031177 phosphopantetheine binding 1.79% (1/56) 10.39 0.000745 0.002435
GO:0140056 organelle localization by membrane tethering 3.57% (2/56) 5.62 0.000788 0.002508
GO:0022406 membrane docking 3.57% (2/56) 5.62 0.000788 0.002508
GO:0010857 calcium-dependent protein kinase activity 3.57% (2/56) 5.59 0.000828 0.002535
GO:0009931 calcium-dependent protein serine/threonine kinase activity 3.57% (2/56) 5.59 0.000828 0.002535
GO:0005886 plasma membrane 10.71% (6/56) 2.45 0.000811 0.002546
GO:0004683 calmodulin-dependent protein kinase activity 3.57% (2/56) 5.57 0.000843 0.002548
GO:0061025 membrane fusion 3.57% (2/56) 5.54 0.000876 0.002618
GO:0048284 organelle fusion 3.57% (2/56) 5.49 0.000937 0.002767
GO:0016192 vesicle-mediated transport 7.14% (4/56) 3.12 0.001176 0.00343
GO:0043167 ion binding 25.0% (14/56) 1.28 0.001318 0.003799
GO:0012505 endomembrane system 3.57% (2/56) 5.17 0.00146 0.004158
GO:0140104 molecular carrier activity 3.57% (2/56) 5.09 0.001623 0.004569
GO:0046777 protein autophosphorylation 3.57% (2/56) 5.08 0.001643 0.004574
GO:0080134 regulation of response to stress 3.57% (2/56) 4.99 0.001858 0.005115
GO:0030674 protein-macromolecule adaptor activity 3.57% (2/56) 4.98 0.001885 0.005132
GO:0006887 exocytosis 3.57% (2/56) 4.88 0.002173 0.00585
GO:0000149 SNARE binding 3.57% (2/56) 4.81 0.002381 0.006342
GO:0072341 modified amino acid binding 1.79% (1/56) 8.63 0.002513 0.006348
GO:0023051 regulation of signaling 3.57% (2/56) 4.77 0.002498 0.006376
GO:0009966 regulation of signal transduction 3.57% (2/56) 4.79 0.002461 0.006415
GO:0010646 regulation of cell communication 3.57% (2/56) 4.78 0.002492 0.006427
GO:0018193 peptidyl-amino acid modification 5.36% (3/56) 3.5 0.002461 0.006483
GO:0016050 vesicle organization 3.57% (2/56) 4.72 0.002676 0.006689
GO:0006633 fatty acid biosynthetic process 3.57% (2/56) 4.67 0.002872 0.007107
GO:0032940 secretion by cell 3.57% (2/56) 4.64 0.002993 0.007333
GO:0005516 calmodulin binding 3.57% (2/56) 4.62 0.003061 0.007426
GO:0060090 molecular adaptor activity 3.57% (2/56) 4.61 0.003116 0.007485
GO:0046903 secretion 3.57% (2/56) 4.59 0.003221 0.007661
GO:0140352 export from cell 3.57% (2/56) 4.41 0.004084 0.009621
GO:0072330 monocarboxylic acid biosynthetic process 3.57% (2/56) 4.38 0.004243 0.0099
GO:0051640 organelle localization 3.57% (2/56) 4.06 0.006527 0.015087
GO:0050790 regulation of catalytic activity 3.57% (2/56) 4.05 0.006635 0.015193
GO:0065009 regulation of molecular function 3.57% (2/56) 3.99 0.007197 0.016326
GO:0005515 protein binding 17.86% (10/56) 1.25 0.008142 0.018301
GO:0048583 regulation of response to stimulus 3.57% (2/56) 3.89 0.00823 0.01833
GO:0003674 molecular_function 51.79% (29/56) 0.55 0.008531 0.018829
GO:0007019 microtubule depolymerization 1.79% (1/56) 6.41 0.011675 0.025539
GO:0006631 fatty acid metabolic process 3.57% (2/56) 3.61 0.011787 0.025556
GO:0004707 MAP kinase activity 1.79% (1/56) 6.29 0.012688 0.027268
GO:0031109 microtubule polymerization or depolymerization 1.79% (1/56) 6.03 0.01517 0.032318
GO:0006465 signal peptide processing 1.79% (1/56) 5.99 0.015628 0.033008
GO:0019899 enzyme binding 3.57% (2/56) 3.38 0.016061 0.033633
GO:0009668 plastid membrane organization 1.79% (1/56) 5.84 0.017279 0.035574
GO:0010027 thylakoid membrane organization 1.79% (1/56) 5.84 0.017279 0.035574
GO:0003824 catalytic activity 30.36% (17/56) 0.75 0.017832 0.036407
GO:0005794 Golgi apparatus 3.57% (2/56) 3.09 0.023446 0.047472
GO:0051261 protein depolymerization 1.79% (1/56) 5.32 0.024672 0.049143
GO:0097159 organic cyclic compound binding 25.0% (14/56) 0.8 0.024501 0.049202
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (56) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms