Coexpression cluster: Cluster_3237 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0001216 DNA-binding transcription activator activity 50.0% (1/2) 12.34 0.000193 0.004922
GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific 50.0% (1/2) 12.34 0.000193 0.004922
GO:0016602 CCAAT-binding factor complex 50.0% (1/2) 11.54 0.000336 0.005714
GO:0046982 protein heterodimerization activity 50.0% (1/2) 9.51 0.001374 0.017519
GO:0090575 RNA polymerase II transcription regulator complex 50.0% (1/2) 8.54 0.002691 0.027445
GO:0005667 transcription regulator complex 50.0% (1/2) 7.52 0.005457 0.027833
GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding 50.0% (1/2) 7.52 0.005441 0.030831
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific 50.0% (1/2) 7.61 0.005119 0.032633
GO:0000987 cis-regulatory region sequence-specific DNA binding 50.0% (1/2) 7.75 0.004644 0.033835
GO:1990837 sequence-specific double-stranded DNA binding 50.0% (1/2) 6.67 0.00982 0.035775
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding 50.0% (1/2) 7.84 0.004362 0.037075
GO:0046983 protein dimerization activity 50.0% (1/2) 6.67 0.009811 0.038488
GO:0000976 transcription cis-regulatory region binding 50.0% (1/2) 6.77 0.009112 0.038725
GO:0001067 transcription regulatory region nucleic acid binding 50.0% (1/2) 6.77 0.009112 0.038725
GO:0006357 regulation of transcription by RNA polymerase II 50.0% (1/2) 6.24 0.013215 0.044933
GO:0003690 double-stranded DNA binding 50.0% (1/2) 6.09 0.01464 0.046665
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms