Coexpression cluster: Cluster_10721 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0004829 threonine-tRNA ligase activity 100.0% (2/2) 14.03 0.0 0.0
GO:0006435 threonyl-tRNA aminoacylation 100.0% (2/2) 14.03 0.0 0.0
GO:0043038 amino acid activation 100.0% (2/2) 8.7 6e-06 4e-05
GO:0043039 tRNA aminoacylation 100.0% (2/2) 8.75 5e-06 4.2e-05
GO:0016875 ligase activity, forming carbon-oxygen bonds 100.0% (2/2) 8.77 5e-06 4.6e-05
GO:0004812 aminoacyl-tRNA ligase activity 100.0% (2/2) 8.77 5e-06 4.6e-05
GO:0009570 chloroplast stroma 100.0% (2/2) 9.06 3e-06 5.4e-05
GO:0009532 plastid stroma 100.0% (2/2) 9.06 3e-06 5.4e-05
GO:0006418 tRNA aminoacylation for protein translation 100.0% (2/2) 8.78 5e-06 6.4e-05
GO:0140101 catalytic activity, acting on a tRNA 100.0% (2/2) 8.1 1.3e-05 8.2e-05
GO:0006399 tRNA metabolic process 100.0% (2/2) 7.64 2.5e-05 0.000142
GO:0016874 ligase activity 100.0% (2/2) 7.25 4.3e-05 0.000222
GO:0005739 mitochondrion 100.0% (2/2) 7.09 5.4e-05 0.000257
GO:0006520 amino acid metabolic process 100.0% (2/2) 7.02 5.9e-05 0.000263
GO:0034660 ncRNA metabolic process 100.0% (2/2) 6.64 0.000101 0.000417
GO:0140098 catalytic activity, acting on RNA 100.0% (2/2) 6.42 0.000136 0.000525
GO:0006082 organic acid metabolic process 100.0% (2/2) 6.1 0.000213 0.000697
GO:0043436 oxoacid metabolic process 100.0% (2/2) 6.1 0.000213 0.000734
GO:0019752 carboxylic acid metabolic process 100.0% (2/2) 6.1 0.000212 0.000773
GO:0140640 catalytic activity, acting on a nucleic acid 100.0% (2/2) 5.63 0.000406 0.00126
GO:0016070 RNA metabolic process 100.0% (2/2) 5.36 0.000589 0.00166
GO:0044281 small molecule metabolic process 100.0% (2/2) 5.4 0.000564 0.001667
GO:0090304 nucleic acid metabolic process 100.0% (2/2) 4.65 0.001597 0.004306
GO:0006139 nucleobase-containing compound metabolic process 100.0% (2/2) 4.41 0.002208 0.005703
GO:0034641 cellular nitrogen compound metabolic process 100.0% (2/2) 4.23 0.002857 0.005904
GO:1901360 organic cyclic compound metabolic process 100.0% (2/2) 4.24 0.002811 0.00601
GO:0005524 ATP binding 100.0% (2/2) 4.34 0.002431 0.006029
GO:0046483 heterocycle metabolic process 100.0% (2/2) 4.31 0.002534 0.006042
GO:0006725 cellular aromatic compound metabolic process 100.0% (2/2) 4.28 0.002653 0.006092
GO:0035639 purine ribonucleoside triphosphate binding 100.0% (2/2) 4.24 0.002799 0.006198
GO:0032559 adenyl ribonucleotide binding 100.0% (2/2) 3.98 0.004001 0.008001
GO:0043227 membrane-bounded organelle 100.0% (2/2) 3.82 0.004993 0.008147
GO:0036094 small molecule binding 100.0% (2/2) 3.73 0.005654 0.008153
GO:0097367 carbohydrate derivative binding 100.0% (2/2) 3.88 0.004612 0.00817
GO:0000166 nucleotide binding 100.0% (2/2) 3.78 0.005284 0.00819
GO:1901265 nucleoside phosphate binding 100.0% (2/2) 3.78 0.005284 0.00819
GO:1901363 heterocyclic compound binding 100.0% (2/2) 3.74 0.005579 0.008236
GO:0043231 intracellular membrane-bounded organelle 100.0% (2/2) 3.83 0.004919 0.008243
GO:0043168 anion binding 100.0% (2/2) 3.76 0.005473 0.008276
GO:0032553 ribonucleotide binding 100.0% (2/2) 3.89 0.004543 0.008285
GO:0017076 purine nucleotide binding 100.0% (2/2) 3.85 0.004826 0.008311
GO:0030554 adenyl nucleotide binding 100.0% (2/2) 3.93 0.004324 0.008377
GO:0032555 purine ribonucleotide binding 100.0% (2/2) 3.9 0.004469 0.008397
GO:0043226 organelle 100.0% (2/2) 3.62 0.006651 0.009164
GO:1901564 organonitrogen compound metabolic process 100.0% (2/2) 3.59 0.006877 0.009269
GO:0043229 intracellular organelle 100.0% (2/2) 3.62 0.00665 0.00937
GO:0043167 ion binding 100.0% (2/2) 3.28 0.010599 0.013982
GO:0043170 macromolecule metabolic process 100.0% (2/2) 3.2 0.011854 0.015312
GO:0044237 cellular metabolic process 100.0% (2/2) 3.09 0.01375 0.017399
GO:0006807 nitrogen compound metabolic process 100.0% (2/2) 3.05 0.014562 0.018057
GO:0044238 primary metabolic process 100.0% (2/2) 2.8 0.020711 0.024694
GO:0097159 organic cyclic compound binding 100.0% (2/2) 2.8 0.020611 0.025056
GO:0071704 organic substance metabolic process 100.0% (2/2) 2.71 0.023373 0.027342
GO:0008152 metabolic process 100.0% (2/2) 2.64 0.025737 0.02955
GO:0110165 cellular anatomical entity 100.0% (2/2) 2.5 0.031232 0.035207
GO:0003824 catalytic activity 100.0% (2/2) 2.47 0.032758 0.036268
GO:0009987 cellular process 100.0% (2/2) 2.44 0.033939 0.036917
GO:0005575 cellular_component 100.0% (2/2) 2.32 0.039968 0.042725
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms