Coexpression cluster: Cluster_157 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003824 catalytic activity 44.44% (44/99) 1.3 0.0 0.0
GO:0009834 plant-type secondary cell wall biogenesis 4.04% (4/99) 6.36 0.0 1.9e-05
GO:0003674 molecular_function 58.59% (58/99) 0.73 2e-06 0.000124
GO:0016740 transferase activity 22.22% (22/99) 1.52 6e-06 0.000207
GO:0005507 copper ion binding 4.04% (4/99) 5.07 7e-06 0.000213
GO:0008194 UDP-glycosyltransferase activity 7.07% (7/99) 3.4 5e-06 0.000237
GO:0006468 protein phosphorylation 13.13% (13/99) 2.1 1.1e-05 0.000287
GO:0004672 protein kinase activity 13.13% (13/99) 2.05 1.6e-05 0.00029
GO:0045492 xylan biosynthetic process 3.03% (3/99) 6.01 1.6e-05 0.000312
GO:0016310 phosphorylation 13.13% (13/99) 2.05 1.5e-05 0.000346
GO:0009832 plant-type cell wall biogenesis 4.04% (4/99) 4.58 2.7e-05 0.00044
GO:0042546 cell wall biogenesis 4.04% (4/99) 4.34 5.1e-05 0.000657
GO:0016773 phosphotransferase activity, alcohol group as acceptor 13.13% (13/99) 1.89 4.8e-05 0.00066
GO:0071669 plant-type cell wall organization or biogenesis 4.04% (4/99) 4.37 4.7e-05 0.000707
GO:0045491 xylan metabolic process 3.03% (3/99) 5.35 6.1e-05 0.00073
GO:0016301 kinase activity 13.13% (13/99) 1.83 7.3e-05 0.000821
GO:0070592 cell wall polysaccharide biosynthetic process 3.03% (3/99) 5.02 0.00012 0.001263
GO:0043167 ion binding 23.23% (23/99) 1.17 0.00015 0.00149
GO:0010410 hemicellulose metabolic process 3.03% (3/99) 4.75 0.000204 0.001828
GO:0016757 glycosyltransferase activity 7.07% (7/99) 2.57 0.000194 0.001832
GO:0044085 cellular component biogenesis 4.04% (4/99) 3.7 0.000276 0.002058
GO:0071554 cell wall organization or biogenesis 4.04% (4/99) 3.72 0.000261 0.00212
GO:0016772 transferase activity, transferring phosphorus-containing groups 13.13% (13/99) 1.64 0.000274 0.002129
GO:0010383 cell wall polysaccharide metabolic process 3.03% (3/99) 4.55 0.000306 0.002188
GO:0003729 mRNA binding 5.05% (5/99) 3.17 0.00026 0.002217
GO:0044036 cell wall macromolecule metabolic process 3.03% (3/99) 4.32 0.000493 0.003045
GO:0006793 phosphorus metabolic process 13.13% (13/99) 1.54 0.000517 0.003085
GO:0006796 phosphate-containing compound metabolic process 13.13% (13/99) 1.55 0.00049 0.003132
GO:0035251 UDP-glucosyltransferase activity 4.04% (4/99) 3.44 0.000548 0.003164
GO:0016788 hydrolase activity, acting on ester bonds 8.08% (8/99) 2.15 0.000481 0.003186
GO:0016491 oxidoreductase activity 10.1% (10/99) 1.85 0.000469 0.003228
GO:0005794 Golgi apparatus 4.04% (4/99) 3.26 0.000856 0.004789
GO:0046872 metal ion binding 10.1% (10/99) 1.72 0.000927 0.005029
GO:0043169 cation binding 10.1% (10/99) 1.69 0.001131 0.005785
GO:0005524 ATP binding 13.13% (13/99) 1.41 0.001176 0.005846
GO:0046527 glucosyltransferase activity 4.04% (4/99) 3.16 0.001126 0.00593
GO:0036211 protein modification process 13.13% (13/99) 1.4 0.001254 0.006066
GO:0035639 purine ribonucleoside triphosphate binding 13.13% (13/99) 1.31 0.002194 0.010335
GO:0000271 polysaccharide biosynthetic process 3.03% (3/99) 3.46 0.002677 0.012287
GO:0005975 carbohydrate metabolic process 6.06% (6/99) 2.02 0.003828 0.016315
GO:0140096 catalytic activity, acting on a protein 13.13% (13/99) 1.22 0.003793 0.016559
GO:0043412 macromolecule modification 13.13% (13/99) 1.22 0.003769 0.016868
GO:0052716 hydroquinone:oxygen oxidoreductase activity 1.01% (1/99) 7.32 0.006241 0.025391
GO:0046274 lignin catabolic process 1.01% (1/99) 7.32 0.006241 0.025391
GO:0046271 phenylpropanoid catabolic process 1.01% (1/99) 7.28 0.006405 0.025478
GO:2000280 regulation of root development 1.01% (1/99) 7.18 0.006896 0.026264
GO:0016051 carbohydrate biosynthetic process 3.03% (3/99) 2.98 0.006772 0.02635
GO:0016758 hexosyltransferase activity 4.04% (4/99) 2.37 0.007705 0.028735
GO:0016787 hydrolase activity 12.12% (12/99) 1.14 0.008038 0.029364
GO:0005976 polysaccharide metabolic process 3.03% (3/99) 2.88 0.008222 0.029435
GO:0046658 obsolete anchored component of plasma membrane 2.02% (2/99) 3.77 0.009686 0.032712
GO:0032559 adenyl ribonucleotide binding 13.13% (13/99) 1.05 0.009634 0.033163
GO:0010497 plasmodesmata-mediated intercellular transport 1.01% (1/99) 6.71 0.009511 0.033381
GO:0000976 transcription cis-regulatory region binding 3.03% (3/99) 2.73 0.010775 0.035066
GO:0001067 transcription regulatory region nucleic acid binding 3.03% (3/99) 2.73 0.010775 0.035066
GO:0019538 protein metabolic process 13.13% (13/99) 1.02 0.011787 0.037677
GO:0010496 intercellular transport 1.01% (1/99) 6.23 0.013258 0.040222
GO:1990837 sequence-specific double-stranded DNA binding 3.03% (3/99) 2.62 0.013163 0.040625
GO:0030554 adenyl nucleotide binding 13.13% (13/99) 1.0 0.013014 0.040868
GO:0032555 purine ribonucleotide binding 13.13% (13/99) 0.97 0.014763 0.044044
GO:0032553 ribonucleotide binding 13.13% (13/99) 0.96 0.015702 0.046076
GO:0097367 carbohydrate derivative binding 13.13% (13/99) 0.95 0.016616 0.047972
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (99) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms