Coexpression cluster: Cluster_419 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0004753 saccharopine dehydrogenase activity 14.89% (14/94) 11.86 0.0 0.0
GO:0019878 lysine biosynthetic process via aminoadipic acid 14.89% (14/94) 10.75 0.0 0.0
GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor 14.89% (14/94) 9.69 0.0 0.0
GO:0009085 lysine biosynthetic process 14.89% (14/94) 8.83 0.0 0.0
GO:0006553 lysine metabolic process 14.89% (14/94) 8.83 0.0 0.0
GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors 14.89% (14/94) 7.74 0.0 0.0
GO:0009067 aspartate family amino acid biosynthetic process 14.89% (14/94) 7.57 0.0 0.0
GO:0009066 aspartate family amino acid metabolic process 14.89% (14/94) 7.22 0.0 0.0
GO:1901607 alpha-amino acid biosynthetic process 14.89% (14/94) 5.86 0.0 0.0
GO:0008652 amino acid biosynthetic process 14.89% (14/94) 5.74 0.0 0.0
GO:0006520 amino acid metabolic process 19.15% (18/94) 4.63 0.0 0.0
GO:0008460 dTDP-glucose 4,6-dehydratase activity 5.32% (5/94) 11.96 0.0 0.0
GO:1901605 alpha-amino acid metabolic process 14.89% (14/94) 5.18 0.0 0.0
GO:0044281 small molecule metabolic process 24.47% (23/94) 3.36 0.0 0.0
GO:0046394 carboxylic acid biosynthetic process 14.89% (14/94) 4.84 0.0 0.0
GO:0016053 organic acid biosynthetic process 14.89% (14/94) 4.84 0.0 0.0
GO:0006082 organic acid metabolic process 19.15% (18/94) 3.71 0.0 0.0
GO:0043436 oxoacid metabolic process 19.15% (18/94) 3.71 0.0 0.0
GO:0019752 carboxylic acid metabolic process 19.15% (18/94) 3.72 0.0 0.0
GO:0044283 small molecule biosynthetic process 14.89% (14/94) 4.28 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 35.11% (33/94) 2.08 0.0 0.0
GO:0006807 nitrogen compound metabolic process 41.49% (39/94) 1.78 0.0 0.0
GO:0071704 organic substance metabolic process 45.74% (43/94) 1.58 0.0 0.0
GO:0009058 biosynthetic process 22.34% (21/94) 2.69 0.0 0.0
GO:0008152 metabolic process 45.74% (43/94) 1.51 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 14.89% (14/94) 3.58 0.0 0.0
GO:0044237 cellular metabolic process 38.3% (36/94) 1.71 0.0 0.0
GO:0003824 catalytic activity 47.87% (45/94) 1.4 0.0 0.0
GO:0016491 oxidoreductase activity 19.15% (18/94) 2.78 0.0 0.0
GO:0044238 primary metabolic process 41.49% (39/94) 1.53 0.0 0.0
GO:0009225 nucleotide-sugar metabolic process 5.32% (5/94) 6.55 0.0 0.0
GO:0044249 cellular biosynthetic process 18.09% (17/94) 2.59 0.0 0.0
GO:1901576 organic substance biosynthetic process 18.09% (17/94) 2.46 0.0 0.0
GO:0016836 hydro-lyase activity 5.32% (5/94) 5.44 0.0 1e-06
GO:0005388 P-type calcium transporter activity 4.26% (4/94) 6.25 0.0 2e-06
GO:0009987 cellular process 40.43% (38/94) 1.13 1e-06 5e-06
GO:0008131 primary amine oxidase activity 3.19% (3/94) 7.15 1e-06 1.2e-05
GO:0016835 carbon-oxygen lyase activity 5.32% (5/94) 4.67 2e-06 1.4e-05
GO:0005737 cytoplasm 14.89% (14/94) 2.21 2e-06 1.5e-05
GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor 3.19% (3/94) 6.96 2e-06 1.6e-05
GO:0015662 P-type ion transporter activity 4.26% (4/94) 5.42 3e-06 1.9e-05
GO:0140358 P-type transmembrane transporter activity 4.26% (4/94) 5.42 3e-06 1.9e-05
GO:0008483 transaminase activity 4.26% (4/94) 5.42 3e-06 1.9e-05
GO:0016769 transferase activity, transferring nitrogenous groups 4.26% (4/94) 5.42 3e-06 1.9e-05
GO:0015085 calcium ion transmembrane transporter activity 4.26% (4/94) 5.44 3e-06 1.9e-05
GO:0048038 quinone binding 3.19% (3/94) 6.66 4e-06 2.6e-05
GO:0008150 biological_process 50.0% (47/94) 0.85 4e-06 2.8e-05
GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity 4.26% (4/94) 4.92 1.1e-05 6.3e-05
GO:0070279 vitamin B6 binding 4.26% (4/94) 4.93 1e-05 6.4e-05
GO:0030170 pyridoxal phosphate binding 4.26% (4/94) 4.93 1e-05 6.4e-05
GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors 3.19% (3/94) 5.9 2e-05 0.000116
GO:0019842 vitamin binding 4.26% (4/94) 4.61 2.5e-05 0.000142
GO:0003674 molecular_function 56.38% (53/94) 0.67 2.5e-05 0.000144
GO:0006470 protein dephosphorylation 4.26% (4/94) 4.57 2.7e-05 0.000152
GO:0004722 protein serine/threonine phosphatase activity 4.26% (4/94) 4.55 2.9e-05 0.000156
GO:0043167 ion binding 24.47% (23/94) 1.25 6.4e-05 0.000345
GO:0004721 phosphoprotein phosphatase activity 4.26% (4/94) 4.2 7.5e-05 0.000394
GO:0022853 active monoatomic ion transmembrane transporter activity 4.26% (4/94) 4.03 0.000116 0.0006
GO:0035970 peptidyl-threonine dephosphorylation 3.19% (3/94) 5.02 0.000119 0.000606
GO:0016829 lyase activity 5.32% (5/94) 3.34 0.00015 0.00075
GO:0016311 dephosphorylation 4.26% (4/94) 3.91 0.00016 0.000789
GO:0005507 copper ion binding 3.19% (3/94) 4.73 0.000214 0.001037
GO:0009308 amine metabolic process 3.19% (3/94) 4.56 0.000304 0.001447
GO:0055086 nucleobase-containing small molecule metabolic process 5.32% (5/94) 2.96 0.000491 0.0023
GO:0046873 metal ion transmembrane transporter activity 4.26% (4/94) 3.35 0.000681 0.003142
GO:0004402 histone acetyltransferase activity 2.13% (2/94) 5.57 0.000855 0.003888
GO:0018393 internal peptidyl-lysine acetylation 2.13% (2/94) 5.51 0.000926 0.003911
GO:0018394 peptidyl-lysine acetylation 2.13% (2/94) 5.51 0.000926 0.003911
GO:0006475 internal protein amino acid acetylation 2.13% (2/94) 5.51 0.000926 0.003911
GO:0016573 histone acetylation 2.13% (2/94) 5.51 0.000926 0.003911
GO:0061733 peptide-lysine-N-acetyltransferase activity 2.13% (2/94) 5.52 0.000913 0.004087
GO:1901702 salt transmembrane transporter activity 4.26% (4/94) 3.19 0.001043 0.004285
GO:0034212 peptide N-acetyltransferase activity 2.13% (2/94) 5.42 0.001039 0.004331
GO:0048270 methionine adenosyltransferase regulator activity 1.06% (1/94) 9.83 0.001094 0.004378
GO:0048269 methionine adenosyltransferase complex 1.06% (1/94) 9.83 0.001094 0.004378
GO:0003713 transcription coactivator activity 2.13% (2/94) 5.19 0.001435 0.005665
GO:1901135 carbohydrate derivative metabolic process 5.32% (5/94) 2.6 0.00148 0.005766
GO:0042626 ATPase-coupled transmembrane transporter activity 4.26% (4/94) 2.94 0.001915 0.007272
GO:0006473 protein acetylation 2.13% (2/94) 4.98 0.001901 0.007311
GO:0022890 inorganic cation transmembrane transporter activity 4.26% (4/94) 2.89 0.002199 0.008246
GO:0016791 phosphatase activity 4.26% (4/94) 2.86 0.002373 0.008788
GO:0036211 protein modification process 12.77% (12/94) 1.36 0.002416 0.008837
GO:0015399 primary active transmembrane transporter activity 4.26% (4/94) 2.84 0.002453 0.008868
GO:0008080 N-acetyltransferase activity 2.13% (2/94) 4.75 0.002597 0.009275
GO:0043169 cation binding 9.57% (9/94) 1.61 0.002841 0.009912
GO:0000123 histone acetyltransferase complex 2.13% (2/94) 4.69 0.002837 0.010014
GO:0008324 monoatomic cation transmembrane transporter activity 4.26% (4/94) 2.75 0.003137 0.010818
GO:0016410 N-acyltransferase activity 2.13% (2/94) 4.59 0.00324 0.010921
GO:0031490 chromatin DNA binding 2.13% (2/94) 4.59 0.003216 0.010964
GO:0043168 anion binding 15.96% (15/94) 1.11 0.003755 0.012516
GO:0031248 protein acetyltransferase complex 2.13% (2/94) 4.46 0.003858 0.012582
GO:1902493 acetyltransferase complex 2.13% (2/94) 4.46 0.003858 0.012582
GO:0003682 chromatin binding 3.19% (3/94) 3.25 0.004032 0.013007
GO:1901363 heterocyclic compound binding 15.96% (15/94) 1.1 0.004106 0.013104
GO:0048194 Golgi vesicle budding 1.06% (1/94) 7.83 0.004371 0.013659
GO:0036094 small molecule binding 15.96% (15/94) 1.09 0.004368 0.013795
GO:0015318 inorganic molecular entity transmembrane transporter activity 4.26% (4/94) 2.58 0.004645 0.014367
GO:0043543 protein acylation 2.13% (2/94) 4.3 0.004795 0.014678
GO:0042578 phosphoric ester hydrolase activity 4.26% (4/94) 2.49 0.005789 0.017542
GO:0016887 ATP hydrolysis activity 4.26% (4/94) 2.49 0.0059 0.017701
GO:0015075 monoatomic ion transmembrane transporter activity 4.26% (4/94) 2.46 0.006215 0.018459
GO:0140096 catalytic activity, acting on a protein 12.77% (12/94) 1.18 0.006632 0.019131
GO:0005524 ATP binding 11.7% (11/94) 1.25 0.006624 0.019293
GO:0043412 macromolecule modification 12.77% (12/94) 1.18 0.006595 0.019396
GO:0006556 S-adenosylmethionine biosynthetic process 1.06% (1/94) 7.15 0.007015 0.020043
GO:0035101 FACT complex 1.06% (1/94) 7.06 0.007481 0.021173
GO:0005575 cellular_component 30.85% (29/94) 0.63 0.008284 0.023225
GO:0046500 S-adenosylmethionine metabolic process 1.06% (1/94) 6.81 0.008878 0.02466
GO:0006796 phosphate-containing compound metabolic process 10.64% (10/94) 1.25 0.009553 0.026053
GO:0018205 peptidyl-lysine modification 2.13% (2/94) 3.78 0.009478 0.026087
GO:0006793 phosphorus metabolic process 10.64% (10/94) 1.24 0.009922 0.026815
GO:0004791 thioredoxin-disulfide reductase (NADP) activity 1.06% (1/94) 6.55 0.010582 0.028344
GO:0035639 purine ribonucleoside triphosphate binding 11.7% (11/94) 1.15 0.010915 0.028979
GO:0022804 active transmembrane transporter activity 4.26% (4/94) 2.18 0.012064 0.031746
GO:0045944 positive regulation of transcription by RNA polymerase II 2.13% (2/94) 3.55 0.012978 0.033857
GO:0016570 histone modification 2.13% (2/94) 3.41 0.015521 0.04014
GO:0140993 histone modifying activity 2.13% (2/94) 3.39 0.015813 0.040546
GO:0016407 acetyltransferase activity 2.13% (2/94) 3.31 0.017614 0.04478
GO:0019538 protein metabolic process 12.77% (12/94) 0.98 0.018618 0.046937
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (94) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms