Coexpression cluster: Cluster_390 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway 4.55% (4/88) 10.35 0.0 0.0
GO:0000151 ubiquitin ligase complex 5.68% (5/88) 4.41 4e-06 0.000894
GO:0044262 obsolete cellular carbohydrate metabolic process 2.27% (2/88) 8.25 2.1e-05 0.001061
GO:0030691 Noc2p-Noc3p complex 2.27% (2/88) 8.25 2.1e-05 0.001061
GO:0030690 Noc1p-Noc2p complex 2.27% (2/88) 8.25 2.1e-05 0.001061
GO:0004619 phosphoglycerate mutase activity 2.27% (2/88) 8.49 1.5e-05 0.001206
GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity 2.27% (2/88) 8.49 1.5e-05 0.001206
GO:0009056 catabolic process 10.23% (9/88) 2.5 3.3e-05 0.001497
GO:0006007 glucose catabolic process 2.27% (2/88) 8.69 1.1e-05 0.00151
GO:0005654 nucleoplasm 3.41% (3/88) 5.57 3.8e-05 0.00156
GO:0006511 ubiquitin-dependent protein catabolic process 5.68% (5/88) 3.64 5.5e-05 0.002042
GO:0061630 ubiquitin protein ligase activity 4.55% (4/88) 4.12 9.2e-05 0.00208
GO:0016755 aminoacyltransferase activity 5.68% (5/88) 3.5 8.8e-05 0.002112
GO:0019941 modification-dependent protein catabolic process 5.68% (5/88) 3.51 8.6e-05 0.002189
GO:0061659 ubiquitin-like protein ligase activity 4.55% (4/88) 4.05 0.000109 0.002205
GO:0030689 Noc complex 2.27% (2/88) 7.26 8.2e-05 0.002229
GO:0043632 modification-dependent macromolecule catabolic process 5.68% (5/88) 3.45 0.000105 0.002235
GO:0004842 ubiquitin-protein transferase activity 5.68% (5/88) 3.58 6.7e-05 0.002279
GO:0019787 ubiquitin-like protein transferase activity 5.68% (5/88) 3.53 7.9e-05 0.002302
GO:0034063 stress granule assembly 2.27% (2/88) 7.29 7.9e-05 0.002457
GO:0140535 intracellular protein-containing complex 6.82% (6/88) 2.93 0.000149 0.002521
GO:0009057 macromolecule catabolic process 6.82% (6/88) 2.92 0.000157 0.002543
GO:0033962 P-body assembly 2.27% (2/88) 6.92 0.000133 0.002566
GO:1901575 organic substance catabolic process 9.09% (8/88) 2.4 0.000148 0.002604
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process 4.55% (4/88) 3.94 0.000147 0.002709
GO:1990234 transferase complex 6.82% (6/88) 2.88 0.00018 0.002811
GO:0010498 proteasomal protein catabolic process 4.55% (4/88) 3.8 0.000211 0.003169
GO:0051603 proteolysis involved in protein catabolic process 5.68% (5/88) 3.16 0.000258 0.003743
GO:0030163 protein catabolic process 4.55% (4/88) 3.68 0.000291 0.004076
GO:0016868 intramolecular phosphotransferase activity 2.27% (2/88) 6.3 0.00031 0.0042
GO:0016567 protein ubiquitination 5.68% (5/88) 3.08 0.000337 0.004411
GO:0032446 protein modification by small protein conjugation 5.68% (5/88) 3.0 0.00043 0.005457
GO:0046365 monosaccharide catabolic process 2.27% (2/88) 5.93 0.000518 0.006191
GO:0019320 hexose catabolic process 2.27% (2/88) 5.93 0.000518 0.006191
GO:0005737 cytoplasm 11.36% (10/88) 1.82 0.000549 0.006366
GO:1902494 catalytic complex 7.95% (7/88) 2.28 0.000635 0.007157
GO:0030145 manganese ion binding 2.27% (2/88) 5.76 0.000655 0.007184
GO:0042273 ribosomal large subunit biogenesis 2.27% (2/88) 5.56 0.000864 0.009235
GO:0070647 protein modification by small protein conjugation or removal 5.68% (5/88) 2.67 0.001199 0.01248
GO:0000959 mitochondrial RNA metabolic process 2.27% (2/88) 5.29 0.001253 0.012714
GO:0005575 cellular_component 34.09% (30/88) 0.77 0.001383 0.013697
GO:0006508 proteolysis 6.82% (6/88) 2.27 0.001623 0.015322
GO:0003729 mRNA binding 4.55% (4/88) 3.01 0.001606 0.015523
GO:0110165 cellular anatomical entity 30.68% (27/88) 0.8 0.002045 0.018869
GO:0032991 protein-containing complex 12.5% (11/88) 1.43 0.00249 0.02247
GO:0043687 post-translational protein modification 5.68% (5/88) 2.37 0.002945 0.025441
GO:0000932 P-body 2.27% (2/88) 4.67 0.0029 0.025593
GO:0032777 piccolo histone acetyltransferase complex 1.14% (1/88) 8.35 0.003071 0.025974
GO:0003723 RNA binding 7.95% (7/88) 1.85 0.003374 0.02796
GO:0032367 intracellular cholesterol transport 1.14% (1/88) 8.04 0.003801 0.029114
GO:0030301 cholesterol transport 1.14% (1/88) 8.04 0.003801 0.029114
GO:0036464 cytoplasmic ribonucleoprotein granule 2.27% (2/88) 4.5 0.003623 0.029415
GO:0035770 ribonucleoprotein granule 2.27% (2/88) 4.48 0.003729 0.029682
GO:0042565 RNA nuclear export complex 1.14% (1/88) 7.93 0.004092 0.030209
GO:0031074 nucleocytoplasmic transport complex 1.14% (1/88) 7.93 0.004092 0.030209
GO:0022613 ribonucleoprotein complex biogenesis 2.27% (2/88) 4.39 0.00423 0.030665
GO:0006006 glucose metabolic process 2.27% (2/88) 4.35 0.004472 0.031304
GO:0016746 acyltransferase activity 5.68% (5/88) 2.23 0.004434 0.031585
GO:1901565 organonitrogen compound catabolic process 4.55% (4/88) 2.56 0.004865 0.033475
GO:0140694 non-membrane-bounded organelle assembly 2.27% (2/88) 4.23 0.005236 0.035432
GO:0012506 vesicle membrane 2.27% (2/88) 4.17 0.005647 0.036976
GO:0030659 cytoplasmic vesicle membrane 2.27% (2/88) 4.17 0.005647 0.036976
GO:0030660 Golgi-associated vesicle membrane 1.14% (1/88) 7.42 0.005841 0.037054
GO:0070150 mitochondrial glycyl-tRNA aminoacylation 1.14% (1/88) 7.42 0.005841 0.037054
GO:0032366 intracellular sterol transport 1.14% (1/88) 7.21 0.006714 0.041939
GO:0009926 auxin polar transport 1.14% (1/88) 6.98 0.007877 0.043812
GO:0055037 recycling endosome 1.14% (1/88) 6.98 0.007877 0.043812
GO:0004654 polyribonucleotide nucleotidyltransferase activity 1.14% (1/88) 6.98 0.007877 0.043812
GO:0070127 tRNA aminoacylation for mitochondrial protein translation 1.14% (1/88) 7.09 0.007296 0.044212
GO:0008690 3-deoxy-manno-octulosonate cytidylyltransferase activity 1.14% (1/88) 7.09 0.007296 0.044212
GO:0048208 COPII vesicle coating 1.14% (1/88) 7.06 0.007441 0.04443
GO:0000958 mitochondrial mRNA catabolic process 1.14% (1/88) 7.01 0.007732 0.044846
GO:0000957 mitochondrial RNA catabolic process 1.14% (1/88) 7.01 0.007732 0.044846
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (88) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms