Coexpression cluster: Cluster_573 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0046914 transition metal ion binding 16.44% (12/73) 2.96 0.0 4e-06
GO:0003674 molecular_function 67.12% (49/73) 0.92 0.0 7e-06
GO:0046872 metal ion binding 17.81% (13/73) 2.54 0.0 2.1e-05
GO:0043169 cation binding 17.81% (13/73) 2.5 0.0 2.1e-05
GO:0140662 ATP-dependent protein folding chaperone 5.48% (4/73) 5.29 4e-06 0.000153
GO:0016710 trans-cinnamate 4-monooxygenase activity 2.74% (2/73) 9.2 5e-06 0.000181
GO:0044183 protein folding chaperone 5.48% (4/73) 5.08 7e-06 0.000192
GO:0043167 ion binding 28.77% (21/73) 1.48 1e-05 0.000237
GO:0008270 zinc ion binding 9.59% (7/73) 3.06 2.3e-05 0.000446
GO:0004497 monooxygenase activity 8.22% (6/73) 3.44 2.1e-05 0.000453
GO:0015740 C4-dicarboxylate transport 2.74% (2/73) 7.84 3.7e-05 0.000564
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 8.22% (6/73) 3.3 3.6e-05 0.000596
GO:0005488 binding 43.84% (32/73) 0.96 4.5e-05 0.000632
GO:0015743 malate transport 2.74% (2/73) 7.86 3.6e-05 0.000648
GO:0006835 dicarboxylic acid transport 2.74% (2/73) 7.32 7.6e-05 0.000939
GO:0016413 O-acetyltransferase activity 4.11% (3/73) 5.25 7.3e-05 0.000964
GO:0019748 secondary metabolic process 4.11% (3/73) 4.89 0.000152 0.001776
GO:0016491 oxidoreductase activity 12.33% (9/73) 2.14 0.0002 0.002203
GO:0005506 iron ion binding 6.85% (5/73) 3.16 0.000258 0.002692
GO:0009808 lignin metabolic process 2.74% (2/73) 6.38 0.000277 0.002739
GO:0046906 tetrapyrrole binding 6.85% (5/73) 2.96 0.000483 0.004345
GO:0020037 heme binding 6.85% (5/73) 2.97 0.000468 0.004414
GO:0016407 acetyltransferase activity 4.11% (3/73) 4.26 0.000546 0.004703
GO:0005886 plasma membrane 9.59% (7/73) 2.28 0.000597 0.004927
GO:0009698 phenylpropanoid metabolic process 2.74% (2/73) 5.68 0.000734 0.005379
GO:0009705 plant-type vacuole membrane 2.74% (2/73) 5.68 0.000729 0.005552
GO:0008374 O-acyltransferase activity 4.11% (3/73) 4.07 0.000793 0.00561
GO:0055085 transmembrane transport 9.59% (7/73) 2.24 0.000715 0.005659
GO:0006810 transport 12.33% (9/73) 1.73 0.001513 0.009983
GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups 5.48% (4/73) 3.03 0.001512 0.010323
GO:0016746 acyltransferase activity 6.85% (5/73) 2.5 0.001972 0.011485
GO:0051234 establishment of localization 12.33% (9/73) 1.67 0.002051 0.011605
GO:0032107 regulation of response to nutrient levels 1.37% (1/73) 9.01 0.001942 0.011651
GO:0032104 regulation of response to extracellular stimulus 1.37% (1/73) 9.01 0.001942 0.011651
GO:0006808 regulation of nitrogen utilization 1.37% (1/73) 9.01 0.001942 0.011651
GO:0051179 localization 12.33% (9/73) 1.61 0.002625 0.014438
GO:0022857 transmembrane transporter activity 9.59% (7/73) 1.85 0.003312 0.016814
GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen 2.74% (2/73) 4.59 0.003232 0.016839
GO:0005774 vacuolar membrane 2.74% (2/73) 4.6 0.003186 0.017049
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 4.11% (3/73) 3.28 0.003751 0.018115
GO:0005794 Golgi apparatus 4.11% (3/73) 3.29 0.003714 0.018385
GO:0005215 transporter activity 9.59% (7/73) 1.78 0.004294 0.020242
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors 4.11% (3/73) 3.15 0.004848 0.022323
GO:0110165 cellular anatomical entity 30.14% (22/73) 0.77 0.00639 0.028755
GO:0005575 cellular_component 32.88% (24/73) 0.72 0.006626 0.029156
GO:0031461 cullin-RING ubiquitin ligase complex 2.74% (2/73) 4.01 0.006997 0.030117
GO:0046942 carboxylic acid transport 2.74% (2/73) 3.6 0.01211 0.049955
GO:0015849 organic acid transport 2.74% (2/73) 3.6 0.01211 0.049955
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (73) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms