Coexpression cluster: Cluster_12208 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009967 positive regulation of signal transduction 50.0% (1/2) 11.8 0.00028 0.003954
GO:0023056 positive regulation of signaling 50.0% (1/2) 11.8 0.00028 0.003954
GO:0010647 positive regulation of cell communication 50.0% (1/2) 11.8 0.00028 0.003954
GO:0090228 positive regulation of red or far-red light signaling pathway 50.0% (1/2) 13.61 8e-05 0.003954
GO:0090227 regulation of red or far-red light signaling pathway 50.0% (1/2) 13.61 8e-05 0.003954
GO:2000030 regulation of response to red or far red light 50.0% (1/2) 12.01 0.000243 0.006013
GO:0006638 neutral lipid metabolic process 50.0% (1/2) 10.06 0.000935 0.006171
GO:0006639 acylglycerol metabolic process 50.0% (1/2) 10.06 0.000935 0.006171
GO:0048584 positive regulation of response to stimulus 50.0% (1/2) 10.49 0.000695 0.006259
GO:0042793 plastid transcription 50.0% (1/2) 12.36 0.00019 0.00626
GO:0046463 acylglycerol biosynthetic process 50.0% (1/2) 10.57 0.000656 0.00649
GO:0019432 triglyceride biosynthetic process 50.0% (1/2) 10.57 0.000656 0.00649
GO:0046460 neutral lipid biosynthetic process 50.0% (1/2) 10.57 0.000656 0.00649
GO:1901576 organic substance biosynthetic process 100.0% (2/2) 4.93 0.001074 0.006643
GO:0009058 biosynthetic process 100.0% (2/2) 4.86 0.001191 0.006936
GO:0006641 triglyceride metabolic process 50.0% (1/2) 10.07 0.000928 0.00707
GO:0044249 cellular biosynthetic process 100.0% (2/2) 5.05 0.000908 0.007488
GO:0023051 regulation of signaling 50.0% (1/2) 8.58 0.002608 0.012908
GO:0010646 regulation of cell communication 50.0% (1/2) 8.58 0.002604 0.01357
GO:0009416 response to light stimulus 50.0% (1/2) 8.41 0.002947 0.013891
GO:0009966 regulation of signal transduction 50.0% (1/2) 8.59 0.002588 0.014232
GO:0009314 response to radiation 50.0% (1/2) 8.29 0.003186 0.014336
GO:0008374 O-acyltransferase activity 50.0% (1/2) 7.68 0.004873 0.019298
GO:0048583 regulation of response to stimulus 50.0% (1/2) 7.69 0.004823 0.019896
GO:0045017 glycerolipid biosynthetic process 50.0% (1/2) 7.72 0.00474 0.020404
GO:0006351 DNA-templated transcription 50.0% (1/2) 7.28 0.006446 0.022006
GO:0045893 positive regulation of DNA-templated transcription 50.0% (1/2) 7.32 0.00626 0.022135
GO:1902680 positive regulation of RNA biosynthetic process 50.0% (1/2) 7.32 0.00626 0.022135
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 50.0% (1/2) 6.98 0.007882 0.022295
GO:0010557 positive regulation of macromolecule biosynthetic process 50.0% (1/2) 7.02 0.007667 0.022323
GO:0031328 positive regulation of cellular biosynthetic process 50.0% (1/2) 7.02 0.007667 0.022323
GO:0009891 positive regulation of biosynthetic process 50.0% (1/2) 7.02 0.007667 0.022323
GO:0046486 glycerolipid metabolic process 50.0% (1/2) 7.16 0.00699 0.023068
GO:0009628 response to abiotic stimulus 50.0% (1/2) 7.35 0.006138 0.02337
GO:0051254 positive regulation of RNA metabolic process 50.0% (1/2) 7.06 0.007461 0.023827
GO:0032774 RNA biosynthetic process 50.0% (1/2) 6.76 0.009188 0.025267
GO:0031325 positive regulation of cellular metabolic process 50.0% (1/2) 6.71 0.009509 0.025444
GO:0009893 positive regulation of metabolic process 50.0% (1/2) 6.49 0.011065 0.026719
GO:0010604 positive regulation of macromolecule metabolic process 50.0% (1/2) 6.49 0.011059 0.02737
GO:0051173 positive regulation of nitrogen compound metabolic process 50.0% (1/2) 6.51 0.010913 0.027703
GO:0048522 positive regulation of cellular process 50.0% (1/2) 6.54 0.010741 0.027983
GO:0009507 chloroplast 50.0% (1/2) 6.37 0.012075 0.028461
GO:0009536 plastid 50.0% (1/2) 6.33 0.012405 0.028561
GO:0048518 positive regulation of biological process 50.0% (1/2) 6.28 0.012865 0.028946
GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups 50.0% (1/2) 6.22 0.013344 0.029358
GO:0044237 cellular metabolic process 100.0% (2/2) 3.09 0.01375 0.029593
GO:0034654 nucleobase-containing compound biosynthetic process 50.0% (1/2) 5.87 0.017053 0.035173
GO:0008610 lipid biosynthetic process 50.0% (1/2) 5.89 0.016836 0.035462
GO:0044238 primary metabolic process 100.0% (2/2) 2.8 0.020711 0.041844
GO:0018130 heterocycle biosynthetic process 50.0% (1/2) 5.51 0.021868 0.043299
GO:0071704 organic substance metabolic process 100.0% (2/2) 2.71 0.023373 0.044499
GO:0019438 aromatic compound biosynthetic process 50.0% (1/2) 5.43 0.022991 0.044629
GO:0008152 metabolic process 100.0% (2/2) 2.64 0.025737 0.044701
GO:0016746 acyltransferase activity 50.0% (1/2) 5.37 0.024066 0.044953
GO:1901362 organic cyclic compound biosynthetic process 50.0% (1/2) 5.29 0.025476 0.045038
GO:0044255 cellular lipid metabolic process 50.0% (1/2) 5.3 0.025213 0.045383
GO:0009059 macromolecule biosynthetic process 50.0% (1/2) 5.31 0.025098 0.046013
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms