Coexpression cluster: Cluster_2247 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1901259 chloroplast rRNA processing 100.0% (2/2) 11.86 0.0 3e-06
GO:0042651 thylakoid membrane 100.0% (2/2) 9.22 3e-06 2.2e-05
GO:0034357 photosynthetic membrane 100.0% (2/2) 9.22 3e-06 2.2e-05
GO:0009535 chloroplast thylakoid membrane 100.0% (2/2) 9.34 2e-06 3.1e-05
GO:0055035 plastid thylakoid membrane 100.0% (2/2) 9.34 2e-06 3.1e-05
GO:0019867 outer membrane 100.0% (2/2) 8.53 7e-06 3.5e-05
GO:0042170 plastid membrane 100.0% (2/2) 8.72 6e-06 3.6e-05
GO:0031968 organelle outer membrane 100.0% (2/2) 8.6 7e-06 3.7e-05
GO:0006364 rRNA processing 100.0% (2/2) 8.0 1.5e-05 6.6e-05
GO:0016072 rRNA metabolic process 100.0% (2/2) 7.89 1.8e-05 7e-05
GO:0003729 mRNA binding 100.0% (2/2) 7.47 3.2e-05 0.000112
GO:0098588 bounding membrane of organelle 100.0% (2/2) 7.2 4.6e-05 0.00015
GO:0034470 ncRNA processing 100.0% (2/2) 7.12 5.2e-05 0.000155
GO:0031090 organelle membrane 100.0% (2/2) 6.62 0.000104 0.00027
GO:0034660 ncRNA metabolic process 100.0% (2/2) 6.64 0.000101 0.000281
GO:0006396 RNA processing 100.0% (2/2) 6.38 0.000145 0.000354
GO:0003723 RNA binding 100.0% (2/2) 5.5 0.000485 0.001113
GO:0016070 RNA metabolic process 100.0% (2/2) 5.36 0.000589 0.001276
GO:0090304 nucleic acid metabolic process 100.0% (2/2) 4.65 0.001597 0.003279
GO:0006139 nucleobase-containing compound metabolic process 100.0% (2/2) 4.41 0.002208 0.004305
GO:0034641 cellular nitrogen compound metabolic process 100.0% (2/2) 4.23 0.002857 0.004642
GO:0006725 cellular aromatic compound metabolic process 100.0% (2/2) 4.28 0.002653 0.004703
GO:0046483 heterocycle metabolic process 100.0% (2/2) 4.31 0.002534 0.004706
GO:1901360 organic cyclic compound metabolic process 100.0% (2/2) 4.24 0.002811 0.004766
GO:0016020 membrane 100.0% (2/2) 4.05 0.00362 0.005648
GO:0003676 nucleic acid binding 100.0% (2/2) 3.93 0.004321 0.006482
GO:0043170 macromolecule metabolic process 100.0% (2/2) 3.2 0.011854 0.017123
GO:0044237 cellular metabolic process 100.0% (2/2) 3.09 0.01375 0.019152
GO:0006807 nitrogen compound metabolic process 100.0% (2/2) 3.05 0.014562 0.019583
GO:0044238 primary metabolic process 100.0% (2/2) 2.8 0.020711 0.026056
GO:0097159 organic cyclic compound binding 100.0% (2/2) 2.8 0.020611 0.026794
GO:0071704 organic substance metabolic process 100.0% (2/2) 2.71 0.023373 0.028486
GO:0008152 metabolic process 100.0% (2/2) 2.64 0.025737 0.030416
GO:0110165 cellular anatomical entity 100.0% (2/2) 2.5 0.031232 0.035825
GO:0009987 cellular process 100.0% (2/2) 2.44 0.033939 0.037818
GO:0005575 cellular_component 100.0% (2/2) 2.32 0.039968 0.043299
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms