Coexpression cluster: Cluster_6522 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006482 protein demethylation 66.67% (2/3) 11.25 0.0 4e-06
GO:0008214 protein dealkylation 66.67% (2/3) 11.25 0.0 4e-06
GO:0070076 histone lysine demethylation 66.67% (2/3) 11.35 0.0 5e-06
GO:0016577 histone demethylation 66.67% (2/3) 11.35 0.0 5e-06
GO:0070988 demethylation 66.67% (2/3) 10.29 1e-06 8e-06
GO:0032452 histone demethylase activity 66.67% (2/3) 10.31 1e-06 9e-06
GO:0140457 protein demethylase activity 66.67% (2/3) 10.31 1e-06 9e-06
GO:0032454 histone H3K9 demethylase activity 66.67% (2/3) 11.37 0.0 9e-06
GO:0033169 histone H3-K9 demethylation 66.67% (2/3) 11.37 0.0 9e-06
GO:0141052 histone H3 demethylase activity 66.67% (2/3) 10.41 1e-06 1e-05
GO:0032451 demethylase activity 66.67% (2/3) 9.53 2e-06 1.8e-05
GO:0031490 chromatin DNA binding 66.67% (2/3) 9.56 2e-06 1.8e-05
GO:0000118 histone deacetylase complex 66.67% (2/3) 9.57 2e-06 2e-05
GO:0000785 chromatin 66.67% (2/3) 8.81 7e-06 4.4e-05
GO:0140993 histone modifying activity 66.67% (2/3) 8.36 1.2e-05 7.2e-05
GO:0016570 histone modification 66.67% (2/3) 8.38 1.2e-05 7.5e-05
GO:0032993 protein-DNA complex 66.67% (2/3) 8.14 1.7e-05 9.3e-05
GO:0003712 transcription coregulator activity 66.67% (2/3) 8.09 1.8e-05 9.3e-05
GO:0003682 chromatin binding 66.67% (2/3) 7.63 3.4e-05 0.000167
GO:0006357 regulation of transcription by RNA polymerase II 66.67% (2/3) 6.65 0.000131 0.000617
GO:0044877 protein-containing complex binding 66.67% (2/3) 6.51 0.00016 0.000718
GO:0048208 COPII vesicle coating 33.33% (1/3) 11.94 0.000255 0.001088
GO:0070973 protein localization to endoplasmic reticulum exit site 33.33% (1/3) 11.59 0.000324 0.001326
GO:0043687 post-translational protein modification 66.67% (2/3) 5.92 0.000359 0.001351
GO:0006901 vesicle coating 33.33% (1/3) 11.46 0.000354 0.001388
GO:0030658 transport vesicle membrane 33.33% (1/3) 10.56 0.000664 0.002152
GO:0140513 nuclear protein-containing complex 66.67% (2/3) 5.48 0.000661 0.002218
GO:0030662 coated vesicle membrane 33.33% (1/3) 10.6 0.000644 0.002242
GO:0012507 ER to Golgi transport vesicle membrane 33.33% (1/3) 10.6 0.000644 0.002242
GO:0140110 transcription regulator activity 66.67% (2/3) 5.38 0.00076 0.002382
GO:1902494 catalytic complex 66.67% (2/3) 5.35 0.000798 0.00242
GO:0006355 regulation of DNA-templated transcription 66.67% (2/3) 4.84 0.001611 0.004326
GO:2001141 regulation of RNA biosynthetic process 66.67% (2/3) 4.84 0.001611 0.004326
GO:0070971 endoplasmic reticulum exit site 33.33% (1/3) 9.38 0.001502 0.004412
GO:0007030 Golgi organization 33.33% (1/3) 9.32 0.001562 0.004449
GO:0051252 regulation of RNA metabolic process 66.67% (2/3) 4.76 0.001779 0.004645
GO:0019219 regulation of nucleobase-containing compound metabolic process 66.67% (2/3) 4.71 0.001924 0.004887
GO:0070972 protein localization to endoplasmic reticulum 33.33% (1/3) 8.96 0.002001 0.004949
GO:0003677 DNA binding 66.67% (2/3) 4.5 0.002552 0.005578
GO:0061919 process utilizing autophagic mechanism 33.33% (1/3) 8.61 0.002549 0.005705
GO:0006914 autophagy 33.33% (1/3) 8.61 0.002549 0.005705
GO:0009889 regulation of biosynthetic process 66.67% (2/3) 4.4 0.002939 0.005878
GO:0080090 regulation of primary metabolic process 66.67% (2/3) 4.51 0.002509 0.005897
GO:0010556 regulation of macromolecule biosynthetic process 66.67% (2/3) 4.42 0.002834 0.005919
GO:0051171 regulation of nitrogen compound metabolic process 66.67% (2/3) 4.53 0.002463 0.005936
GO:0010468 regulation of gene expression 66.67% (2/3) 4.43 0.002796 0.005973
GO:0031326 regulation of cellular biosynthetic process 66.67% (2/3) 4.4 0.002935 0.005997
GO:0031323 regulation of cellular metabolic process 66.67% (2/3) 4.28 0.003433 0.006585
GO:0060255 regulation of macromolecule metabolic process 66.67% (2/3) 4.29 0.003392 0.006643
GO:0030659 cytoplasmic vesicle membrane 33.33% (1/3) 8.05 0.003774 0.006823
GO:0012506 vesicle membrane 33.33% (1/3) 8.05 0.003774 0.006823
GO:0019222 regulation of metabolic process 66.67% (2/3) 4.24 0.003654 0.00687
GO:0016050 vesicle organization 33.33% (1/3) 7.95 0.004048 0.00718
GO:0008152 metabolic process 100.0% (3/3) 2.64 0.004129 0.007187
GO:0032991 protein-containing complex 66.67% (2/3) 3.85 0.006232 0.010652
GO:0036211 protein modification process 66.67% (2/3) 3.75 0.007153 0.012007
GO:0050794 regulation of cellular process 66.67% (2/3) 3.73 0.007367 0.012148
GO:0050789 regulation of biological process 66.67% (2/3) 3.65 0.008115 0.01293
GO:0005575 cellular_component 100.0% (3/3) 2.32 0.00799 0.01295
GO:0065007 biological regulation 66.67% (2/3) 3.55 0.009328 0.014142
GO:0140096 catalytic activity, acting on a protein 66.67% (2/3) 3.56 0.009185 0.014154
GO:0043412 macromolecule modification 66.67% (2/3) 3.56 0.009172 0.014369
GO:0033365 protein localization to organelle 33.33% (1/3) 6.43 0.011567 0.017259
GO:0019538 protein metabolic process 66.67% (2/3) 3.36 0.012094 0.017763
GO:0003676 nucleic acid binding 66.67% (2/3) 3.34 0.012395 0.017926
GO:0065003 protein-containing complex assembly 33.33% (1/3) 5.95 0.016137 0.022983
GO:1901564 organonitrogen compound metabolic process 66.67% (2/3) 3.01 0.019491 0.027346
GO:0098588 bounding membrane of organelle 33.33% (1/3) 5.62 0.020235 0.027972
GO:0008150 biological_process 100.0% (3/3) 1.85 0.021524 0.029323
GO:0022607 cellular component assembly 33.33% (1/3) 5.37 0.023944 0.032153
GO:0033036 macromolecule localization 33.33% (1/3) 5.15 0.027839 0.035363
GO:0043933 protein-containing complex organization 33.33% (1/3) 5.21 0.0268 0.035482
GO:0070727 cellular macromolecule localization 33.33% (1/3) 5.16 0.027785 0.035778
GO:0008104 protein localization 33.33% (1/3) 5.16 0.027721 0.036192
GO:0044248 cellular catabolic process 33.33% (1/3) 5.03 0.030336 0.03752
GO:0031090 organelle membrane 33.33% (1/3) 5.03 0.030257 0.037922
GO:0043170 macromolecule metabolic process 66.67% (2/3) 2.61 0.032981 0.040263
GO:0051641 cellular localization 33.33% (1/3) 4.65 0.039224 0.04727
GO:0006807 nitrogen compound metabolic process 66.67% (2/3) 2.47 0.040171 0.047798
GO:0006996 organelle organization 33.33% (1/3) 4.56 0.041788 0.049101
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (3) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms