Coexpression cluster: Cluster_6968 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009330 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex 100.0% (3/3) 13.03 0.0 0.0
GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity 100.0% (3/3) 11.62 0.0 0.0
GO:0006265 DNA topological change 100.0% (3/3) 11.09 0.0 0.0
GO:0003916 DNA topoisomerase activity 100.0% (3/3) 10.78 0.0 0.0
GO:0071103 DNA conformation change 100.0% (3/3) 9.37 0.0 0.0
GO:0008094 ATP-dependent activity, acting on DNA 100.0% (3/3) 7.92 0.0 1e-06
GO:0051276 chromosome organization 100.0% (3/3) 7.75 0.0 1e-06
GO:0016853 isomerase activity 100.0% (3/3) 7.61 0.0 1e-06
GO:0140097 catalytic activity, acting on DNA 100.0% (3/3) 7.0 0.0 3e-06
GO:0006996 organelle organization 100.0% (3/3) 6.15 3e-06 1.5e-05
GO:1902494 catalytic complex 100.0% (3/3) 5.93 4e-06 2e-05
GO:0006259 DNA metabolic process 100.0% (3/3) 5.96 4e-06 2e-05
GO:0140657 ATP-dependent activity 100.0% (3/3) 5.85 5e-06 2.2e-05
GO:0140640 catalytic activity, acting on a nucleic acid 100.0% (3/3) 5.63 8e-06 3.2e-05
GO:0016043 cellular component organization 100.0% (3/3) 5.24 1.9e-05 6.7e-05
GO:0071840 cellular component organization or biogenesis 100.0% (3/3) 5.08 2.6e-05 8.2e-05
GO:0003677 DNA binding 100.0% (3/3) 5.09 2.6e-05 8.6e-05
GO:0005737 cytoplasm 100.0% (3/3) 4.96 3.3e-05 0.0001
GO:0090304 nucleic acid metabolic process 100.0% (3/3) 4.65 6.4e-05 0.000181
GO:0006139 nucleobase-containing compound metabolic process 100.0% (3/3) 4.41 0.000104 0.000267
GO:0032991 protein-containing complex 100.0% (3/3) 4.43 9.9e-05 0.000268
GO:0005524 ATP binding 100.0% (3/3) 4.34 0.00012 0.000294
GO:0046483 heterocycle metabolic process 100.0% (3/3) 4.31 0.000128 0.000299
GO:0034641 cellular nitrogen compound metabolic process 100.0% (3/3) 4.23 0.000153 0.000305
GO:0006725 cellular aromatic compound metabolic process 100.0% (3/3) 4.28 0.000137 0.000307
GO:1901360 organic cyclic compound metabolic process 100.0% (3/3) 4.24 0.000149 0.00031
GO:0035639 purine ribonucleoside triphosphate binding 100.0% (3/3) 4.24 0.000148 0.00032
GO:0032559 adenyl ribonucleotide binding 100.0% (3/3) 3.98 0.000253 0.000488
GO:0030554 adenyl nucleotide binding 100.0% (3/3) 3.93 0.000284 0.000512
GO:0097367 carbohydrate derivative binding 100.0% (3/3) 3.88 0.000313 0.000513
GO:0032553 ribonucleotide binding 100.0% (3/3) 3.89 0.000306 0.000517
GO:0032555 purine ribonucleotide binding 100.0% (3/3) 3.9 0.000299 0.00052
GO:0003676 nucleic acid binding 100.0% (3/3) 3.93 0.000284 0.000529
GO:0017076 purine nucleotide binding 100.0% (3/3) 3.85 0.000335 0.000532
GO:1901265 nucleoside phosphate binding 100.0% (3/3) 3.78 0.000384 0.000576
GO:0000166 nucleotide binding 100.0% (3/3) 3.78 0.000384 0.000576
GO:0036094 small molecule binding 100.0% (3/3) 3.73 0.000425 0.000589
GO:0043168 anion binding 100.0% (3/3) 3.76 0.000405 0.000591
GO:1901363 heterocyclic compound binding 100.0% (3/3) 3.74 0.000417 0.000592
GO:0043167 ion binding 100.0% (3/3) 3.28 0.001091 0.001473
GO:0043170 macromolecule metabolic process 100.0% (3/3) 3.2 0.001291 0.0017
GO:0044237 cellular metabolic process 100.0% (3/3) 3.09 0.001612 0.002073
GO:0006807 nitrogen compound metabolic process 100.0% (3/3) 3.05 0.001757 0.002207
GO:0044238 primary metabolic process 100.0% (3/3) 2.8 0.002981 0.003577
GO:0097159 organic cyclic compound binding 100.0% (3/3) 2.8 0.002959 0.003631
GO:0071704 organic substance metabolic process 100.0% (3/3) 2.71 0.003573 0.004195
GO:0008152 metabolic process 100.0% (3/3) 2.64 0.004129 0.004744
GO:0110165 cellular anatomical entity 100.0% (3/3) 2.5 0.005519 0.006209
GO:0003824 catalytic activity 100.0% (3/3) 2.47 0.005929 0.006534
GO:0009987 cellular process 100.0% (3/3) 2.44 0.006253 0.006753
GO:0005575 cellular_component 100.0% (3/3) 2.32 0.00799 0.00846
GO:0005488 binding 100.0% (3/3) 2.15 0.01149 0.011932
GO:0008150 biological_process 100.0% (3/3) 1.85 0.021524 0.021931
GO:0003674 molecular_function 100.0% (3/3) 1.5 0.044202 0.044202
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (3) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms