Coexpression cluster: Cluster_4682 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0042176 regulation of protein catabolic process 33.33% (1/3) 8.61 0.002559 0.01645
GO:1903050 regulation of proteolysis involved in protein catabolic process 33.33% (1/3) 8.79 0.002255 0.016911
GO:0030162 regulation of proteolysis 33.33% (1/3) 8.65 0.002479 0.017163
GO:0061136 regulation of proteasomal protein catabolic process 33.33% (1/3) 8.86 0.00215 0.017592
GO:0004523 RNA-DNA hybrid ribonuclease activity 33.33% (1/3) 8.39 0.002972 0.017835
GO:0045732 positive regulation of protein catabolic process 33.33% (1/3) 8.86 0.002145 0.019306
GO:0009896 positive regulation of catabolic process 33.33% (1/3) 8.16 0.003481 0.019578
GO:0045862 positive regulation of proteolysis 33.33% (1/3) 8.96 0.002001 0.020006
GO:0000209 protein polyubiquitination 33.33% (1/3) 7.99 0.003929 0.020799
GO:2000058 regulation of ubiquitin-dependent protein catabolic process 33.33% (1/3) 9.01 0.001936 0.021777
GO:0032434 regulation of proteasomal ubiquitin-dependent protein catabolic process 33.33% (1/3) 9.09 0.001831 0.023542
GO:0016891 RNA endonuclease activity, producing 5'-phosphomonoesters 33.33% (1/3) 7.64 0.005009 0.023726
GO:0051247 positive regulation of protein metabolic process 33.33% (1/3) 7.68 0.004874 0.024372
GO:0009894 regulation of catabolic process 33.33% (1/3) 7.43 0.00577 0.024728
GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters 33.33% (1/3) 7.43 0.00577 0.024728
GO:1903052 positive regulation of proteolysis involved in protein catabolic process 33.33% (1/3) 9.12 0.001801 0.027017
GO:1901800 positive regulation of proteasomal protein catabolic process 33.33% (1/3) 9.12 0.001801 0.027017
GO:0004521 RNA endonuclease activity 33.33% (1/3) 6.9 0.008344 0.030037
GO:0061659 ubiquitin-like protein ligase activity 33.33% (1/3) 6.93 0.00819 0.030712
GO:0000151 ubiquitin ligase complex 33.33% (1/3) 6.96 0.007991 0.03127
GO:0061630 ubiquitin protein ligase activity 33.33% (1/3) 6.99 0.007847 0.032102
GO:0051246 regulation of protein metabolic process 33.33% (1/3) 6.5 0.011022 0.034207
GO:0004540 RNA nuclease activity 33.33% (1/3) 6.51 0.010908 0.035062
GO:0019899 enzyme binding 33.33% (1/3) 6.6 0.010269 0.035545
GO:0004519 endonuclease activity 33.33% (1/3) 6.52 0.010859 0.036195
GO:0004518 nuclease activity 33.33% (1/3) 5.9 0.0167 0.037575
GO:0044390 ubiquitin-like protein conjugating enzyme binding 33.33% (1/3) 9.21 0.001691 0.038057
GO:0009893 positive regulation of metabolic process 33.33% (1/3) 5.91 0.016552 0.038197
GO:0010604 positive regulation of macromolecule metabolic process 33.33% (1/3) 5.91 0.016542 0.039179
GO:0016755 aminoacyltransferase activity 33.33% (1/3) 6.05 0.014996 0.039695
GO:0051173 positive regulation of nitrogen compound metabolic process 33.33% (1/3) 5.93 0.016325 0.039709
GO:0043632 modification-dependent macromolecule catabolic process 33.33% (1/3) 6.0 0.015544 0.039972
GO:0005515 protein binding 66.67% (2/3) 3.15 0.01599 0.039974
GO:0019941 modification-dependent protein catabolic process 33.33% (1/3) 6.06 0.014917 0.040683
GO:0006511 ubiquitin-dependent protein catabolic process 33.33% (1/3) 6.2 0.013572 0.040716
GO:0004842 ubiquitin-protein transferase activity 33.33% (1/3) 6.14 0.014151 0.041083
GO:0019787 ubiquitin-like protein transferase activity 33.33% (1/3) 6.09 0.014655 0.041217
GO:0048518 positive regulation of biological process 33.33% (1/3) 5.69 0.019235 0.041219
GO:0051603 proteolysis involved in protein catabolic process 33.33% (1/3) 5.72 0.01889 0.041467
GO:0016567 protein ubiquitination 33.33% (1/3) 5.63 0.020019 0.0419
GO:0032446 protein modification by small protein conjugation 33.33% (1/3) 5.55 0.021122 0.043203
GO:2000060 positive regulation of ubiquitin-dependent protein catabolic process 33.33% (1/3) 9.25 0.001637 0.049097
GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process 33.33% (1/3) 9.25 0.001637 0.049097
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (3) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms