Coexpression cluster: Cluster_4855 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0033866 nucleoside bisphosphate biosynthetic process 50.0% (1/2) 9.63 0.001261 0.007818
GO:0034030 ribonucleoside bisphosphate biosynthetic process 50.0% (1/2) 9.63 0.001261 0.007818
GO:0034033 purine nucleoside bisphosphate biosynthetic process 50.0% (1/2) 9.63 0.001261 0.007818
GO:0071616 acyl-CoA biosynthetic process 50.0% (1/2) 10.19 0.000855 0.007953
GO:0035384 thioester biosynthetic process 50.0% (1/2) 10.19 0.000855 0.007953
GO:0006084 acetyl-CoA metabolic process 50.0% (1/2) 9.83 0.001095 0.009255
GO:0035383 thioester metabolic process 50.0% (1/2) 9.16 0.001743 0.009536
GO:0006637 acyl-CoA metabolic process 50.0% (1/2) 9.16 0.001743 0.009536
GO:0006085 acetyl-CoA biosynthetic process 50.0% (1/2) 10.24 0.000825 0.009593
GO:0009579 thylakoid 50.0% (1/2) 9.64 0.001251 0.009695
GO:0004742 dihydrolipoyllysine-residue acetyltransferase activity 50.0% (1/2) 12.2 0.000213 0.009904
GO:0016418 S-acetyltransferase activity 50.0% (1/2) 12.2 0.000213 0.009904
GO:0016417 S-acyltransferase activity 50.0% (1/2) 10.34 0.000772 0.010256
GO:0031976 plastid thylakoid 50.0% (1/2) 10.46 0.000712 0.011038
GO:0009534 chloroplast thylakoid 50.0% (1/2) 10.46 0.000712 0.011038
GO:0045254 pyruvate dehydrogenase complex 50.0% (1/2) 11.43 0.000363 0.011245
GO:0009526 plastid envelope 50.0% (1/2) 8.47 0.002824 0.011417
GO:0009941 chloroplast envelope 50.0% (1/2) 8.47 0.002824 0.011417
GO:0006086 acetyl-CoA biosynthetic process from pyruvate 50.0% (1/2) 10.98 0.000496 0.011528
GO:0009152 purine ribonucleotide biosynthetic process 50.0% (1/2) 8.39 0.00298 0.011547
GO:1990204 oxidoreductase complex 50.0% (1/2) 8.54 0.002677 0.011857
GO:0033875 ribonucleoside bisphosphate metabolic process 50.0% (1/2) 8.61 0.002564 0.011924
GO:0034032 purine nucleoside bisphosphate metabolic process 50.0% (1/2) 8.61 0.002564 0.011924
GO:0033865 nucleoside bisphosphate metabolic process 50.0% (1/2) 8.61 0.002564 0.011924
GO:0044272 sulfur compound biosynthetic process 50.0% (1/2) 8.25 0.003286 0.012222
GO:0031967 organelle envelope 50.0% (1/2) 8.11 0.003611 0.012438
GO:0031975 envelope 50.0% (1/2) 8.11 0.003611 0.012438
GO:0016407 acetyltransferase activity 50.0% (1/2) 7.87 0.004282 0.012445
GO:0006090 pyruvate metabolic process 50.0% (1/2) 7.79 0.004508 0.012704
GO:0006164 purine nucleotide biosynthetic process 50.0% (1/2) 8.02 0.003837 0.012744
GO:0046390 ribose phosphate biosynthetic process 50.0% (1/2) 7.87 0.004262 0.012786
GO:0072522 purine-containing compound biosynthetic process 50.0% (1/2) 7.91 0.004143 0.012842
GO:0009260 ribonucleotide biosynthetic process 50.0% (1/2) 7.92 0.004116 0.0132
GO:1901293 nucleoside phosphate biosynthetic process 50.0% (1/2) 7.47 0.00564 0.014986
GO:0009165 nucleotide biosynthetic process 50.0% (1/2) 7.47 0.00564 0.014986
GO:0006790 sulfur compound metabolic process 50.0% (1/2) 7.17 0.006931 0.017904
GO:0009150 purine ribonucleotide metabolic process 50.0% (1/2) 7.05 0.007537 0.018945
GO:1901137 carbohydrate derivative biosynthetic process 50.0% (1/2) 6.77 0.009125 0.021215
GO:0009259 ribonucleotide metabolic process 50.0% (1/2) 6.85 0.008674 0.021229
GO:0043604 amide biosynthetic process 50.0% (1/2) 6.73 0.00937 0.021254
GO:0019693 ribose phosphate metabolic process 50.0% (1/2) 6.79 0.009035 0.021546
GO:0006163 purine nucleotide metabolic process 50.0% (1/2) 6.67 0.009784 0.021665
GO:0072521 purine-containing compound metabolic process 50.0% (1/2) 6.58 0.01041 0.022514
GO:0032787 monocarboxylic acid metabolic process 50.0% (1/2) 6.39 0.011863 0.023984
GO:0090407 organophosphate biosynthetic process 50.0% (1/2) 6.36 0.012147 0.024036
GO:0006753 nucleoside phosphate metabolic process 50.0% (1/2) 6.41 0.011754 0.024291
GO:0043603 amide metabolic process 50.0% (1/2) 6.31 0.012541 0.024298
GO:0009117 nucleotide metabolic process 50.0% (1/2) 6.42 0.011635 0.024591
GO:0055086 nucleobase-containing small molecule metabolic process 50.0% (1/2) 6.19 0.013606 0.025306
GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups 50.0% (1/2) 6.22 0.013344 0.025327
GO:0034654 nucleobase-containing compound biosynthetic process 50.0% (1/2) 5.87 0.017053 0.031098
GO:1901135 carbohydrate derivative metabolic process 50.0% (1/2) 5.84 0.017436 0.031184
GO:0018130 heterocycle biosynthetic process 50.0% (1/2) 5.51 0.021868 0.038373
GO:0019438 aromatic compound biosynthetic process 50.0% (1/2) 5.43 0.022991 0.038875
GO:0019637 organophosphate metabolic process 50.0% (1/2) 5.46 0.022606 0.038932
GO:0043228 non-membrane-bounded organelle 50.0% (1/2) 5.32 0.024835 0.039147
GO:1901362 organic cyclic compound biosynthetic process 50.0% (1/2) 5.29 0.025476 0.039488
GO:0043232 intracellular non-membrane-bounded organelle 50.0% (1/2) 5.32 0.024832 0.039816
GO:0016746 acyltransferase activity 50.0% (1/2) 5.37 0.024066 0.039967
GO:1901566 organonitrogen compound biosynthetic process 50.0% (1/2) 5.33 0.024691 0.040285
GO:0006082 organic acid metabolic process 50.0% (1/2) 5.1 0.029008 0.042821
GO:0043436 oxoacid metabolic process 50.0% (1/2) 5.1 0.028985 0.043477
GO:0044271 cellular nitrogen compound biosynthetic process 50.0% (1/2) 5.04 0.030182 0.043858
GO:0019752 carboxylic acid metabolic process 50.0% (1/2) 5.1 0.028903 0.044065
GO:1902494 catalytic complex 50.0% (1/2) 4.93 0.03253 0.046543
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms