Coexpression cluster: Cluster_7548 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1902475 L-alpha-amino acid transmembrane transport 9.09% (1/11) 11.35 0.000384 0.012837
GO:0000064 L-ornithine transmembrane transporter activity 9.09% (1/11) 11.49 0.000348 0.014518
GO:1903352 L-ornithine transmembrane transport 9.09% (1/11) 11.49 0.000348 0.014518
GO:0015822 ornithine transport 9.09% (1/11) 11.49 0.000348 0.014518
GO:0015807 L-amino acid transport 9.09% (1/11) 10.78 0.000567 0.01579
GO:0009138 pyrimidine nucleoside diphosphate metabolic process 9.09% (1/11) 9.28 0.00161 0.016801
GO:0009133 nucleoside diphosphate biosynthetic process 9.09% (1/11) 9.29 0.001591 0.017718
GO:0009139 pyrimidine nucleoside diphosphate biosynthetic process 9.09% (1/11) 9.29 0.001591 0.017718
GO:0009411 response to UV 9.09% (1/11) 9.04 0.001902 0.018685
GO:0046048 UDP metabolic process 9.09% (1/11) 9.36 0.001518 0.019504
GO:0009193 pyrimidine ribonucleoside diphosphate metabolic process 9.09% (1/11) 9.36 0.001518 0.019504
GO:0009041 UMP/dUMP kinase activity 9.09% (1/11) 9.38 0.0015 0.022773
GO:0009194 pyrimidine ribonucleoside diphosphate biosynthetic process 9.09% (1/11) 9.38 0.0015 0.022773
GO:0006225 UDP biosynthetic process 9.09% (1/11) 9.38 0.0015 0.022773
GO:0009188 ribonucleoside diphosphate biosynthetic process 9.09% (1/11) 9.38 0.0015 0.022773
GO:0033862 UMP kinase activity 9.09% (1/11) 9.38 0.0015 0.022773
GO:0006360 transcription by RNA polymerase I 9.09% (1/11) 8.56 0.002651 0.024596
GO:0004427 inorganic diphosphate phosphatase activity 9.09% (1/11) 8.44 0.00287 0.025227
GO:0050145 nucleoside monophosphate kinase activity 9.09% (1/11) 8.33 0.003107 0.025947
GO:0034654 nucleobase-containing compound biosynthetic process 18.18% (2/11) 4.41 0.003831 0.030462
GO:0006334 nucleosome assembly 9.09% (1/11) 7.85 0.004312 0.032728
GO:0016776 phosphotransferase activity, phosphate group as acceptor 9.09% (1/11) 7.16 0.006952 0.036282
GO:0009218 pyrimidine ribonucleotide metabolic process 9.09% (1/11) 7.18 0.006861 0.036962
GO:0019205 nucleobase-containing compound kinase activity 9.09% (1/11) 7.31 0.006297 0.037558
GO:0019438 aromatic compound biosynthetic process 18.18% (2/11) 3.98 0.006859 0.038181
GO:0110165 cellular anatomical entity 54.55% (6/11) 1.63 0.006233 0.038552
GO:0015179 L-amino acid transmembrane transporter activity 9.09% (1/11) 7.43 0.005787 0.03866
GO:0006220 pyrimidine nucleotide metabolic process 9.09% (1/11) 6.94 0.008134 0.03881
GO:1901362 organic cyclic compound biosynthetic process 18.18% (2/11) 3.83 0.008369 0.038825
GO:0034728 nucleosome organization 9.09% (1/11) 7.48 0.005587 0.038877
GO:0009987 cellular process 54.55% (6/11) 1.57 0.007706 0.038996
GO:0043226 organelle 36.36% (4/11) 2.16 0.009143 0.039149
GO:0009220 pyrimidine ribonucleotide biosynthetic process 9.09% (1/11) 7.19 0.006843 0.039406
GO:0006221 pyrimidine nucleotide biosynthetic process 9.09% (1/11) 6.94 0.008116 0.039862
GO:0018130 heterocycle biosynthetic process 18.18% (2/11) 4.05 0.006223 0.039972
GO:0080008 Cul4-RING E3 ubiquitin ligase complex 9.09% (1/11) 7.5 0.005514 0.040038
GO:0043229 intracellular organelle 36.36% (4/11) 2.16 0.009139 0.040165
GO:0003684 damaged DNA binding 9.09% (1/11) 6.77 0.009115 0.041139
GO:0072528 pyrimidine-containing compound biosynthetic process 9.09% (1/11) 6.57 0.010493 0.04381
GO:0005575 cellular_component 54.55% (6/11) 1.45 0.011631 0.04517
GO:0006839 mitochondrial transport 9.09% (1/11) 6.37 0.011997 0.045534
GO:0044271 cellular nitrogen compound biosynthetic process 18.18% (2/11) 3.58 0.011608 0.046156
GO:0072527 pyrimidine-containing compound metabolic process 9.09% (1/11) 6.45 0.011418 0.046506
GO:0003674 molecular_function 72.73% (8/11) 1.04 0.013099 0.046542
GO:0006139 nucleobase-containing compound metabolic process 27.27% (3/11) 2.54 0.012878 0.046752
GO:0065004 protein-DNA complex assembly 9.09% (1/11) 6.28 0.012757 0.047344
GO:0003333 amino acid transmembrane transport 9.09% (1/11) 6.14 0.014059 0.048914
GO:0009132 nucleoside diphosphate metabolic process 9.09% (1/11) 5.86 0.017055 0.049968
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (11) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms