Coexpression cluster: Cluster_5593 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006829 zinc ion transport 50.0% (1/2) 10.44 0.000722 0.008063
GO:0005385 zinc ion transmembrane transporter activity 50.0% (1/2) 10.57 0.000659 0.008829
GO:0000387 spliceosomal snRNP assembly 50.0% (1/2) 10.71 0.000596 0.009977
GO:0034715 pICln-Sm protein complex 50.0% (1/2) 12.5 0.000173 0.011595
GO:0071577 zinc ion transmembrane transport 50.0% (1/2) 10.87 0.000532 0.011891
GO:0000041 transition metal ion transport 50.0% (1/2) 9.32 0.001567 0.014998
GO:0045292 mRNA cis splicing, via spliceosome 50.0% (1/2) 10.94 0.000509 0.017056
GO:0046915 transition metal ion transmembrane transporter activity 50.0% (1/2) 8.76 0.002305 0.01716
GO:0120114 Sm-like protein family complex 50.0% (1/2) 8.93 0.002052 0.017189
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 50.0% (1/2) 7.91 0.004163 0.021453
GO:0000375 RNA splicing, via transesterification reactions 50.0% (1/2) 7.79 0.004505 0.021558
GO:0008380 RNA splicing 50.0% (1/2) 7.56 0.005285 0.02213
GO:0005681 spliceosomal complex 50.0% (1/2) 7.64 0.005006 0.02236
GO:0071826 protein-RNA complex organization 50.0% (1/2) 7.96 0.004013 0.022406
GO:0000398 mRNA splicing, via spliceosome 50.0% (1/2) 7.98 0.003943 0.024018
GO:0046873 metal ion transmembrane transporter activity 50.0% (1/2) 6.91 0.008316 0.024226
GO:0098660 inorganic ion transmembrane transport 50.0% (1/2) 6.92 0.008253 0.025135
GO:0034220 monoatomic ion transmembrane transport 50.0% (1/2) 7.01 0.007736 0.025917
GO:1901702 salt transmembrane transporter activity 50.0% (1/2) 6.74 0.009334 0.026056
GO:0022618 protein-RNA complex assembly 50.0% (1/2) 8.0 0.003893 0.026086
GO:0030001 metal ion transport 50.0% (1/2) 6.93 0.008187 0.026121
GO:0098662 inorganic cation transmembrane transport 50.0% (1/2) 7.02 0.007687 0.027105
GO:0016071 mRNA metabolic process 50.0% (1/2) 6.44 0.011512 0.027547
GO:0098655 monoatomic cation transmembrane transport 50.0% (1/2) 7.08 0.007401 0.02755
GO:0006397 mRNA processing 50.0% (1/2) 7.14 0.007083 0.027916
GO:0008324 monoatomic cation transmembrane transporter activity 50.0% (1/2) 6.3 0.01265 0.028252
GO:0006812 monoatomic cation transport 50.0% (1/2) 6.5 0.010996 0.028335
GO:0022890 inorganic cation transmembrane transporter activity 50.0% (1/2) 6.44 0.011456 0.028428
GO:0065003 protein-containing complex assembly 50.0% (1/2) 6.53 0.010787 0.02891
GO:0006811 monoatomic ion transport 50.0% (1/2) 6.31 0.012594 0.029096
GO:0015318 inorganic molecular entity transmembrane transporter activity 50.0% (1/2) 6.14 0.014134 0.030548
GO:0015075 monoatomic ion transmembrane transporter activity 50.0% (1/2) 6.02 0.015363 0.032167
GO:0022607 cellular component assembly 50.0% (1/2) 5.96 0.016027 0.03254
GO:1990904 ribonucleoprotein complex 50.0% (1/2) 5.86 0.017106 0.033709
GO:0043933 protein-containing complex organization 50.0% (1/2) 5.79 0.017947 0.034356
GO:0006396 RNA processing 50.0% (1/2) 5.38 0.023944 0.044563
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms