Coexpression cluster: Cluster_626 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0055085 transmembrane transport 15.03% (26/173) 2.89 0.0 0.0
GO:0016020 membrane 23.12% (40/173) 1.94 0.0 0.0
GO:0042910 xenobiotic transmembrane transporter activity 5.2% (9/173) 5.58 0.0 0.0
GO:0022857 transmembrane transporter activity 15.03% (26/173) 2.5 0.0 0.0
GO:0005215 transporter activity 15.03% (26/173) 2.43 0.0 0.0
GO:0000947 amino acid catabolic process to alcohol via Ehrlich pathway 2.89% (5/173) 8.02 0.0 0.0
GO:0000949 aromatic amino acid family catabolic process to alcohol via Ehrlich pathway 2.89% (5/173) 8.02 0.0 0.0
GO:0000955 amino acid catabolic process via Ehrlich pathway 2.89% (5/173) 8.02 0.0 0.0
GO:0004737 pyruvate decarboxylase activity 2.89% (5/173) 8.02 0.0 0.0
GO:0005372 water transmembrane transporter activity 3.47% (6/173) 6.52 0.0 0.0
GO:0015250 water channel activity 3.47% (6/173) 6.52 0.0 0.0
GO:0003333 amino acid transmembrane transport 4.62% (8/173) 5.17 0.0 0.0
GO:0003674 molecular_function 59.54% (103/173) 0.75 0.0 0.0
GO:0030976 thiamine pyrophosphate binding 2.89% (5/173) 7.28 0.0 0.0
GO:0050997 quaternary ammonium group binding 2.89% (5/173) 7.28 0.0 0.0
GO:1905039 carboxylic acid transmembrane transport 4.62% (8/173) 4.93 0.0 0.0
GO:1903825 organic acid transmembrane transport 4.62% (8/173) 4.93 0.0 0.0
GO:0008150 biological_process 50.29% (87/173) 0.85 0.0 0.0
GO:0006810 transport 15.61% (27/173) 2.07 0.0 0.0
GO:0019825 oxygen binding 2.31% (4/173) 8.4 0.0 0.0
GO:0051234 establishment of localization 15.61% (27/173) 2.01 0.0 0.0
GO:0004445 inositol-polyphosphate 5-phosphatase activity 3.47% (6/173) 5.97 0.0 0.0
GO:0046030 inositol trisphosphate phosphatase activity 3.47% (6/173) 5.97 0.0 0.0
GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity 3.47% (6/173) 5.93 0.0 0.0
GO:0034594 phosphatidylinositol trisphosphate phosphatase activity 3.47% (6/173) 5.88 0.0 0.0
GO:0015297 antiporter activity 5.2% (9/173) 4.28 0.0 0.0
GO:0015171 amino acid transmembrane transporter activity 4.62% (8/173) 4.69 0.0 0.0
GO:0052745 inositol phosphate phosphatase activity 3.47% (6/173) 5.85 0.0 0.0
GO:0006865 amino acid transport 4.62% (8/173) 4.67 0.0 0.0
GO:0051179 localization 15.61% (27/173) 1.95 0.0 0.0
GO:0106019 phosphatidylinositol-4,5-bisphosphate phosphatase activity 3.47% (6/173) 5.73 0.0 0.0
GO:0004439 phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity 3.47% (6/173) 5.73 0.0 0.0
GO:0005342 organic acid transmembrane transporter activity 4.62% (8/173) 4.57 0.0 0.0
GO:0046943 carboxylic acid transmembrane transporter activity 4.62% (8/173) 4.57 0.0 0.0
GO:0034595 phosphatidylinositol phosphate 5-phosphatase activity 3.47% (6/173) 5.45 0.0 0.0
GO:0046942 carboxylic acid transport 4.62% (8/173) 4.35 0.0 0.0
GO:0015849 organic acid transport 4.62% (8/173) 4.35 0.0 0.0
GO:0034593 phosphatidylinositol bisphosphate phosphatase activity 3.47% (6/173) 5.4 0.0 0.0
GO:0008514 organic anion transmembrane transporter activity 4.62% (8/173) 4.32 0.0 0.0
GO:0015291 secondary active transmembrane transporter activity 5.2% (9/173) 3.91 0.0 0.0
GO:0046856 phosphatidylinositol dephosphorylation 3.47% (6/173) 5.27 0.0 0.0
GO:0046839 phospholipid dephosphorylation 3.47% (6/173) 5.27 0.0 0.0
GO:0015711 organic anion transport 4.62% (8/173) 4.2 0.0 0.0
GO:0052866 phosphatidylinositol phosphate phosphatase activity 3.47% (6/173) 5.19 0.0 0.0
GO:1901681 sulfur compound binding 2.89% (5/173) 5.7 0.0 1e-06
GO:0009074 aromatic amino acid family catabolic process 2.89% (5/173) 5.6 0.0 1e-06
GO:0009987 cellular process 34.68% (60/173) 0.91 0.0 3e-06
GO:0044282 small molecule catabolic process 4.62% (8/173) 3.64 0.0 3e-06
GO:0009755 hormone-mediated signaling pathway 3.47% (6/173) 4.38 1e-06 5e-06
GO:0046165 alcohol biosynthetic process 2.89% (5/173) 4.95 1e-06 7e-06
GO:0022803 passive transmembrane transporter activity 4.05% (7/173) 3.77 1e-06 9e-06
GO:0015267 channel activity 4.05% (7/173) 3.77 1e-06 9e-06
GO:0019752 carboxylic acid metabolic process 7.51% (13/173) 2.37 2e-06 1.6e-05
GO:0006082 organic acid metabolic process 7.51% (13/173) 2.36 2e-06 1.6e-05
GO:0043436 oxoacid metabolic process 7.51% (13/173) 2.36 2e-06 1.6e-05
GO:0110165 cellular anatomical entity 32.37% (56/173) 0.87 2e-06 1.7e-05
GO:0030258 lipid modification 3.47% (6/173) 4.03 2e-06 1.8e-05
GO:0016831 carboxy-lyase activity 2.89% (5/173) 4.48 4e-06 2.8e-05
GO:0009072 aromatic amino acid metabolic process 2.89% (5/173) 4.48 4e-06 2.8e-05
GO:0046488 phosphatidylinositol metabolic process 3.47% (6/173) 3.84 5e-06 3.6e-05
GO:0009063 amino acid catabolic process 2.89% (5/173) 4.38 5e-06 3.7e-05
GO:0046618 xenobiotic export from cell 1.73% (3/173) 6.42 7e-06 4.6e-05
GO:0042908 xenobiotic transport 1.73% (3/173) 6.42 7e-06 4.6e-05
GO:1990961 xenobiotic detoxification by transmembrane export across the plasma membrane 1.73% (3/173) 6.42 7e-06 4.6e-05
GO:0022804 active transmembrane transporter activity 5.78% (10/173) 2.62 7e-06 4.8e-05
GO:0016054 organic acid catabolic process 3.47% (6/173) 3.7 8e-06 5.6e-05
GO:0046395 carboxylic acid catabolic process 3.47% (6/173) 3.7 8e-06 5.6e-05
GO:0016311 dephosphorylation 3.47% (6/173) 3.61 1.2e-05 7.7e-05
GO:0140115 export across plasma membrane 1.73% (3/173) 6.13 1.2e-05 8e-05
GO:0044248 cellular catabolic process 5.78% (10/173) 2.5 1.4e-05 8.8e-05
GO:0019842 vitamin binding 2.89% (5/173) 4.05 1.5e-05 9.6e-05
GO:0006650 glycerophospholipid metabolic process 3.47% (6/173) 3.51 1.7e-05 0.000107
GO:0009734 auxin-activated signaling pathway 1.73% (3/173) 5.95 1.8e-05 0.000108
GO:0044281 small molecule metabolic process 8.67% (15/173) 1.87 1.9e-05 0.000117
GO:1901617 organic hydroxy compound biosynthetic process 2.89% (5/173) 3.96 2e-05 0.00012
GO:0006066 alcohol metabolic process 2.89% (5/173) 3.97 2e-05 0.00012
GO:0019439 aromatic compound catabolic process 4.05% (7/173) 3.03 2.9e-05 0.000166
GO:1901361 organic cyclic compound catabolic process 4.05% (7/173) 3.01 3.2e-05 0.000183
GO:0016491 oxidoreductase activity 9.25% (16/173) 1.73 3.3e-05 0.000185
GO:0016830 carbon-carbon lyase activity 2.89% (5/173) 3.8 3.4e-05 0.000192
GO:0046486 glycerolipid metabolic process 3.47% (6/173) 3.31 3.8e-05 0.000209
GO:0009873 ethylene-activated signaling pathway 1.73% (3/173) 5.51 4.4e-05 0.000241
GO:0016787 hydrolase activity 13.29% (23/173) 1.28 8.1e-05 0.000439
GO:0044255 cellular lipid metabolic process 5.78% (10/173) 2.19 8.4e-05 0.000441
GO:0016791 phosphatase activity 4.05% (7/173) 2.79 8.3e-05 0.000442
GO:0005575 cellular_component 32.37% (56/173) 0.7 8.5e-05 0.000444
GO:0003824 catalytic activity 30.06% (52/173) 0.73 9e-05 0.00046
GO:0020037 heme binding 4.62% (8/173) 2.4 0.000161 0.000816
GO:0006644 phospholipid metabolic process 3.47% (6/173) 2.91 0.000169 0.000841
GO:0046906 tetrapyrrole binding 4.62% (8/173) 2.39 0.000168 0.000844
GO:1901702 salt transmembrane transporter activity 3.47% (6/173) 2.89 0.000183 0.000898
GO:0045300 acyl-[acyl-carrier-protein] desaturase activity 1.16% (2/173) 6.65 0.000191 0.000927
GO:0071702 organic substance transport 5.78% (10/173) 2.03 0.000197 0.000949
GO:0006629 lipid metabolic process 6.36% (11/173) 1.91 0.000199 0.000949
GO:0000287 magnesium ion binding 2.31% (4/173) 3.63 0.000338 0.001591
GO:0042044 fluid transport 1.16% (2/173) 6.21 0.000354 0.001631
GO:0006833 water transport 1.16% (2/173) 6.21 0.000354 0.001631
GO:0042578 phosphoric ester hydrolase activity 4.05% (7/173) 2.42 0.000383 0.001746
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds 4.05% (7/173) 2.42 0.000392 0.00177
GO:1901565 organonitrogen compound catabolic process 4.05% (7/173) 2.4 0.000423 0.00189
GO:0004024 alcohol dehydrogenase activity, zinc-dependent 1.16% (2/173) 5.93 0.00052 0.002255
GO:0051903 S-(hydroxymethyl)glutathione dehydrogenase activity 1.16% (2/173) 5.93 0.00052 0.002255
GO:1901615 organic hydroxy compound metabolic process 2.89% (5/173) 2.96 0.000519 0.002297
GO:0110095 cellular detoxification of aldehyde 1.16% (2/173) 5.84 0.000585 0.002466
GO:0046294 formaldehyde catabolic process 1.16% (2/173) 5.84 0.000585 0.002466
GO:0046292 formaldehyde metabolic process 1.16% (2/173) 5.84 0.000585 0.002466
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding 2.31% (4/173) 3.4 0.000608 0.002495
GO:0043891 glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity 1.16% (2/173) 5.82 0.000604 0.002501
GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity 1.16% (2/173) 5.82 0.000604 0.002501
GO:0000160 phosphorelay signal transduction system 1.73% (3/173) 4.19 0.000639 0.002595
GO:0032787 monocarboxylic acid metabolic process 3.47% (6/173) 2.54 0.000647 0.002606
GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water 1.16% (2/173) 5.67 0.000737 0.002943
GO:0018455 alcohol dehydrogenase [NAD(P)+] activity 1.16% (2/173) 5.65 0.000759 0.002977
GO:0004022 alcohol dehydrogenase (NAD+) activity 1.16% (2/173) 5.65 0.000759 0.002977
GO:0000987 cis-regulatory region sequence-specific DNA binding 2.31% (4/173) 3.31 0.000768 0.002983
GO:0071705 nitrogen compound transport 4.62% (8/173) 2.04 0.000838 0.003228
GO:0005829 cytosol 5.2% (9/173) 1.87 0.000897 0.003397
GO:0019637 organophosphate metabolic process 4.62% (8/173) 2.02 0.000896 0.003424
GO:0016798 hydrolase activity, acting on glycosyl bonds 4.05% (7/173) 2.2 0.000931 0.003469
GO:1901575 organic substance catabolic process 5.78% (10/173) 1.74 0.000927 0.003482
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific 2.31% (4/173) 3.17 0.001098 0.004058
GO:0005975 carbohydrate metabolic process 5.2% (9/173) 1.8 0.001285 0.00471
GO:0009056 catabolic process 5.78% (10/173) 1.67 0.001341 0.004875
GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding 2.31% (4/173) 3.09 0.001373 0.004949
GO:0016788 hydrolase activity, acting on ester bonds 5.78% (10/173) 1.66 0.001403 0.005018
GO:0015318 inorganic molecular entity transmembrane transporter activity 3.47% (6/173) 2.29 0.001583 0.005615
GO:1990748 cellular detoxification 1.16% (2/173) 5.1 0.001626 0.005724
GO:0046185 aldehyde catabolic process 1.16% (2/173) 5.01 0.001837 0.006416
GO:0051287 NAD binding 1.73% (3/173) 3.63 0.001954 0.00677
GO:0016829 lyase activity 2.89% (5/173) 2.46 0.002366 0.008073
GO:0044283 small molecule biosynthetic process 3.47% (6/173) 2.17 0.002352 0.008088
GO:0006520 amino acid metabolic process 3.47% (6/173) 2.17 0.0024 0.008128
GO:0005886 plasma membrane 5.78% (10/173) 1.55 0.002426 0.008152
GO:0003700 DNA-binding transcription factor activity 4.62% (8/173) 1.78 0.002525 0.008422
GO:0098754 detoxification 1.16% (2/173) 4.7 0.002783 0.009215
GO:0140352 export from cell 1.73% (3/173) 3.37 0.003238 0.010641
GO:0009506 plasmodesma 1.73% (3/173) 3.34 0.00342 0.011158
GO:0005911 cell-cell junction 1.73% (3/173) 3.33 0.003466 0.011228
GO:0070161 anchoring junction 1.73% (3/173) 3.32 0.003523 0.011328
GO:0030054 cell junction 1.73% (3/173) 3.31 0.003608 0.011521
GO:0017171 serine hydrolase activity 2.31% (4/173) 2.44 0.006714 0.021134
GO:0008236 serine-type peptidase activity 2.31% (4/173) 2.44 0.006714 0.021134
GO:0140110 transcription regulator activity 4.62% (8/173) 1.53 0.007102 0.022201
GO:0006090 pyruvate metabolic process 1.73% (3/173) 2.94 0.007315 0.022706
GO:0071704 organic substance metabolic process 22.54% (39/173) 0.56 0.00742 0.022873
GO:0001067 transcription regulatory region nucleic acid binding 2.31% (4/173) 2.34 0.008501 0.025849
GO:0000976 transcription cis-regulatory region binding 2.31% (4/173) 2.34 0.008501 0.025849
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors 2.31% (4/173) 2.32 0.008918 0.026934
GO:0004252 serine-type endopeptidase activity 1.73% (3/173) 2.81 0.009287 0.02786
GO:0008152 metabolic process 23.12% (40/173) 0.53 0.009693 0.028886
GO:0006979 response to oxidative stress 1.73% (3/173) 2.78 0.009854 0.02917
GO:0006081 cellular aldehyde metabolic process 1.16% (2/173) 3.71 0.010494 0.03086
GO:1990837 sequence-specific double-stranded DNA binding 2.31% (4/173) 2.23 0.010954 0.031591
GO:0046983 protein dimerization activity 2.31% (4/173) 2.23 0.010917 0.031688
GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity 0.58% (1/173) 6.51 0.010882 0.031792
GO:0044238 primary metabolic process 20.81% (36/173) 0.53 0.013693 0.039235
GO:0016706 2-oxoglutarate-dependent dioxygenase activity 1.16% (2/173) 3.5 0.013903 0.039584
GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor 1.16% (2/173) 3.48 0.01416 0.040059
GO:0006631 fatty acid metabolic process 1.73% (3/173) 2.57 0.014538 0.04087
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 2.89% (5/173) 1.79 0.015749 0.043999
GO:0043621 protein self-association 0.58% (1/173) 5.93 0.016279 0.045196
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (173) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms