Coexpression cluster: Cluster_519 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016104 triterpenoid biosynthetic process 13.64% (18/132) 7.64 0.0 0.0
GO:0006722 triterpenoid metabolic process 13.64% (18/132) 7.64 0.0 0.0
GO:0005811 lipid droplet 13.64% (18/132) 7.42 0.0 0.0
GO:0008610 lipid biosynthetic process 21.97% (29/132) 4.7 0.0 0.0
GO:0016866 intramolecular transferase activity 13.64% (18/132) 6.37 0.0 0.0
GO:0016114 terpenoid biosynthetic process 13.64% (18/132) 6.31 0.0 0.0
GO:0006721 terpenoid metabolic process 13.64% (18/132) 6.08 0.0 0.0
GO:0008299 isoprenoid biosynthetic process 13.64% (18/132) 5.99 0.0 0.0
GO:0006720 isoprenoid metabolic process 13.64% (18/132) 5.53 0.0 0.0
GO:0006629 lipid metabolic process 21.97% (29/132) 3.7 0.0 0.0
GO:0016126 sterol biosynthetic process 8.33% (11/132) 7.35 0.0 0.0
GO:0016853 isomerase activity 13.64% (18/132) 4.74 0.0 0.0
GO:0016716 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen 6.06% (8/132) 8.19 0.0 0.0
GO:0000254 C-4 methylsterol oxidase activity 6.06% (8/132) 8.19 0.0 0.0
GO:0006694 steroid biosynthetic process 8.33% (11/132) 6.29 0.0 0.0
GO:0016125 sterol metabolic process 8.33% (11/132) 6.18 0.0 0.0
GO:0043228 non-membrane-bounded organelle 15.91% (21/132) 3.67 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 15.91% (21/132) 3.67 0.0 0.0
GO:1901617 organic hydroxy compound biosynthetic process 9.09% (12/132) 5.62 0.0 0.0
GO:1901576 organic substance biosynthetic process 22.73% (30/132) 2.79 0.0 0.0
GO:0009058 biosynthetic process 22.73% (30/132) 2.72 0.0 0.0
GO:0008202 steroid metabolic process 8.33% (11/132) 5.78 0.0 0.0
GO:0044255 cellular lipid metabolic process 13.64% (18/132) 3.43 0.0 0.0
GO:1901615 organic hydroxy compound metabolic process 9.09% (12/132) 4.61 0.0 0.0
GO:0008526 phosphatidylinositol transfer activity 3.79% (5/132) 8.59 0.0 0.0
GO:0120014 phospholipid transfer activity 3.79% (5/132) 7.58 0.0 0.0
GO:0120013 lipid transfer activity 3.79% (5/132) 7.51 0.0 0.0
GO:0005548 phospholipid transporter activity 3.79% (5/132) 6.99 0.0 0.0
GO:0004174 electron-transferring-flavoprotein dehydrogenase activity 3.03% (4/132) 8.29 0.0 0.0
GO:0005789 endoplasmic reticulum membrane 6.06% (8/132) 4.73 0.0 0.0
GO:0016649 oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor 3.03% (4/132) 7.96 0.0 0.0
GO:0043130 ubiquitin binding 4.55% (6/132) 5.51 0.0 0.0
GO:0032182 ubiquitin-like protein binding 4.55% (6/132) 5.45 0.0 0.0
GO:0110165 cellular anatomical entity 38.64% (51/132) 1.13 0.0 0.0
GO:0043226 organelle 23.48% (31/132) 1.53 0.0 0.0
GO:0043229 intracellular organelle 23.48% (31/132) 1.53 0.0 0.0
GO:0044249 cellular biosynthetic process 13.64% (18/132) 2.18 0.0 1e-06
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 7.58% (10/132) 3.18 0.0 1e-06
GO:0140359 ABC-type transporter activity 5.3% (7/132) 4.01 0.0 2e-06
GO:0003838 sterol 24-C-methyltransferase activity 2.27% (3/132) 7.81 0.0 2e-06
GO:0005575 cellular_component 38.64% (51/132) 0.95 1e-06 4e-06
GO:2000601 positive regulation of Arp2/3 complex-mediated actin nucleation 2.27% (3/132) 7.4 1e-06 5e-06
GO:1902905 positive regulation of supramolecular fiber organization 2.27% (3/132) 7.4 1e-06 5e-06
GO:0034237 protein kinase A regulatory subunit binding 2.27% (3/132) 7.4 1e-06 5e-06
GO:0071933 Arp2/3 complex binding 2.27% (3/132) 7.4 1e-06 5e-06
GO:0051495 positive regulation of cytoskeleton organization 2.27% (3/132) 7.4 1e-06 5e-06
GO:0051127 positive regulation of actin nucleation 2.27% (3/132) 7.4 1e-06 5e-06
GO:0051018 protein kinase A binding 2.27% (3/132) 7.4 1e-06 5e-06
GO:0034315 regulation of Arp2/3 complex-mediated actin nucleation 2.27% (3/132) 7.4 1e-06 5e-06
GO:1901362 organic cyclic compound biosynthetic process 8.33% (11/132) 2.7 1e-06 7e-06
GO:0005319 lipid transporter activity 3.79% (5/132) 4.72 2e-06 8e-06
GO:0008169 C-methyltransferase activity 2.27% (3/132) 6.98 2e-06 1e-05
GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors 3.03% (4/132) 5.45 3e-06 1.3e-05
GO:0051125 regulation of actin nucleation 2.27% (3/132) 6.7 4e-06 1.8e-05
GO:0004497 monooxygenase activity 6.06% (8/132) 3.0 9e-06 3.9e-05
GO:0003824 catalytic activity 34.09% (45/132) 0.91 8e-06 3.9e-05
GO:0005506 iron ion binding 6.06% (8/132) 2.98 9e-06 4.3e-05
GO:0042626 ATPase-coupled transmembrane transporter activity 5.3% (7/132) 3.26 1e-05 4.5e-05
GO:0009055 electron transfer activity 3.03% (4/132) 4.85 1.3e-05 5.7e-05
GO:0110053 regulation of actin filament organization 2.27% (3/132) 6.02 1.5e-05 6.5e-05
GO:0015399 primary active transmembrane transporter activity 5.3% (7/132) 3.16 1.6e-05 6.6e-05
GO:0010638 positive regulation of organelle organization 2.27% (3/132) 5.98 1.7e-05 7e-05
GO:1902903 regulation of supramolecular fiber organization 2.27% (3/132) 5.92 1.9e-05 7.7e-05
GO:0016491 oxidoreductase activity 10.61% (14/132) 1.92 2.2e-05 8.8e-05
GO:0032956 regulation of actin cytoskeleton organization 2.27% (3/132) 5.65 3.3e-05 0.00013
GO:0032970 regulation of actin filament-based process 2.27% (3/132) 5.63 3.4e-05 0.000132
GO:0051130 positive regulation of cellular component organization 2.27% (3/132) 5.59 3.7e-05 0.000142
GO:0030036 actin cytoskeleton organization 2.27% (3/132) 5.4 5.5e-05 0.000207
GO:0031090 organelle membrane 6.06% (8/132) 2.57 7e-05 0.000259
GO:0031418 L-ascorbic acid binding 1.52% (2/132) 7.35 7.3e-05 0.000269
GO:0051493 regulation of cytoskeleton organization 2.27% (3/132) 5.16 9.1e-05 0.000328
GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline 1.52% (2/132) 6.87 0.000142 0.000481
GO:0019471 4-hydroxyproline metabolic process 1.52% (2/132) 6.87 0.000142 0.000481
GO:0004656 procollagen-proline 4-dioxygenase activity 1.52% (2/132) 6.87 0.000142 0.000481
GO:0031545 peptidyl-proline 4-dioxygenase activity 1.52% (2/132) 6.87 0.000142 0.000481
GO:0019798 procollagen-proline dioxygenase activity 1.52% (2/132) 6.87 0.000142 0.000481
GO:0019511 peptidyl-proline hydroxylation 1.52% (2/132) 6.83 0.00015 0.000493
GO:0031543 peptidyl-proline dioxygenase activity 1.52% (2/132) 6.83 0.00015 0.000493
GO:0003674 molecular_function 50.76% (67/132) 0.52 0.000204 0.000664
GO:0018126 protein hydroxylation 1.52% (2/132) 6.47 0.000248 0.000796
GO:0022804 active transmembrane transporter activity 5.3% (7/132) 2.5 0.000269 0.000854
GO:0005215 transporter activity 9.09% (12/132) 1.7 0.00035 0.001098
GO:0005783 endoplasmic reticulum 3.79% (5/132) 3.03 0.000403 0.001248
GO:0050660 flavin adenine dinucleotide binding 3.03% (4/132) 3.52 0.000444 0.00136
GO:0046914 transition metal ion binding 7.58% (10/132) 1.85 0.000519 0.00157
GO:0030029 actin filament-based process 2.27% (3/132) 4.18 0.000656 0.00196
GO:0048029 monosaccharide binding 1.52% (2/132) 5.46 0.000991 0.002928
GO:0007010 cytoskeleton organization 3.03% (4/132) 3.15 0.00116 0.003388
GO:0005856 cytoskeleton 2.27% (3/132) 3.72 0.001627 0.004697
GO:0044238 primary metabolic process 24.24% (32/132) 0.75 0.001832 0.005233
GO:0033043 regulation of organelle organization 2.27% (3/132) 3.57 0.002164 0.00611
GO:0140657 ATP-dependent activity 6.06% (8/132) 1.8 0.002259 0.006311
GO:0043177 organic acid binding 1.52% (2/132) 4.66 0.002939 0.008035
GO:0031406 carboxylic acid binding 1.52% (2/132) 4.66 0.002939 0.008035
GO:0018208 peptidyl-proline modification 1.52% (2/132) 4.52 0.003539 0.009474
GO:0016887 ATP hydrolysis activity 3.79% (5/132) 2.32 0.003523 0.00953
GO:0051128 regulation of cellular component organization 2.27% (3/132) 3.26 0.003979 0.010542
GO:0071704 organic substance metabolic process 24.24% (32/132) 0.67 0.004742 0.012436
GO:0006575 cellular modified amino acid metabolic process 1.52% (2/132) 4.16 0.005756 0.014942
GO:0046872 metal ion binding 7.58% (10/132) 1.31 0.00755 0.019404
GO:0008168 methyltransferase activity 3.03% (4/132) 2.38 0.007751 0.019723
GO:0006114 glycerol biosynthetic process 0.76% (1/132) 6.9 0.008313 0.020348
GO:0043136 glycerol-3-phosphatase activity 0.76% (1/132) 6.9 0.008313 0.020348
GO:0019401 alditol biosynthetic process 0.76% (1/132) 6.9 0.008313 0.020348
GO:0016706 2-oxoglutarate-dependent dioxygenase activity 1.52% (2/132) 3.89 0.008305 0.020926
GO:0016741 transferase activity, transferring one-carbon groups 3.03% (4/132) 2.32 0.008898 0.021573
GO:0043169 cation binding 7.58% (10/132) 1.27 0.008997 0.02161
GO:2000280 regulation of root development 0.76% (1/132) 6.76 0.009185 0.021856
GO:0008152 metabolic process 24.24% (32/132) 0.6 0.009636 0.02272
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity 2.27% (3/132) 2.71 0.01117 0.026098
GO:0010497 plasmodesmata-mediated intercellular transport 0.76% (1/132) 6.29 0.012661 0.029315
GO:0016020 membrane 11.36% (15/132) 0.92 0.0134 0.030749
GO:0017111 ribonucleoside triphosphate phosphatase activity 3.79% (5/132) 1.78 0.01597 0.036322
GO:0010496 intercellular transport 0.76% (1/132) 5.81 0.017638 0.039763
GO:0016462 pyrophosphatase activity 3.79% (5/132) 1.68 0.020682 0.04622
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 3.79% (5/132) 1.66 0.02206 0.048874
GO:0019842 vitamin binding 1.52% (2/132) 3.12 0.022582 0.049604
GO:0016817 hydrolase activity, acting on acid anhydrides 3.79% (5/132) 1.64 0.022865 0.049798
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (132) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms