Coexpression cluster: Cluster_3082 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043968 histone H2A acetylation 33.33% (1/3) 13.44 9e-05 0.010873
GO:0043967 histone H4 acetylation 33.33% (1/3) 12.33 0.000195 0.011779
GO:0070603 SWI/SNF superfamily-type complex 33.33% (1/3) 9.18 0.001721 0.013886
GO:0003714 transcription corepressor activity 33.33% (1/3) 9.18 0.001721 0.013886
GO:0018393 internal peptidyl-lysine acetylation 33.33% (1/3) 9.48 0.001402 0.014139
GO:0006475 internal protein amino acid acetylation 33.33% (1/3) 9.48 0.001402 0.014139
GO:0016573 histone acetylation 33.33% (1/3) 9.48 0.001402 0.014139
GO:0018394 peptidyl-lysine acetylation 33.33% (1/3) 9.48 0.001402 0.014139
GO:0043543 protein acylation 33.33% (1/3) 8.27 0.003246 0.014549
GO:1902679 negative regulation of RNA biosynthetic process 33.33% (1/3) 8.29 0.003192 0.014853
GO:0045892 negative regulation of DNA-templated transcription 33.33% (1/3) 8.29 0.003192 0.014853
GO:1904949 ATPase complex 33.33% (1/3) 8.81 0.00222 0.014923
GO:0031248 protein acetyltransferase complex 33.33% (1/3) 8.43 0.002903 0.015271
GO:1902493 acetyltransferase complex 33.33% (1/3) 8.43 0.002903 0.015271
GO:0006473 protein acetylation 33.33% (1/3) 8.95 0.002021 0.01528
GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum 33.33% (1/3) 8.55 0.002664 0.015347
GO:0000122 negative regulation of transcription by RNA polymerase II 33.33% (1/3) 9.22 0.001671 0.015558
GO:0030126 COPI vesicle coat 33.33% (1/3) 8.82 0.002215 0.015765
GO:0000123 histone acetyltransferase complex 33.33% (1/3) 8.65 0.002479 0.015788
GO:0000118 histone deacetylase complex 33.33% (1/3) 8.57 0.002624 0.015873
GO:0051253 negative regulation of RNA metabolic process 33.33% (1/3) 8.08 0.003685 0.015923
GO:0006891 intra-Golgi vesicle-mediated transport 33.33% (1/3) 8.3 0.003162 0.01594
GO:0000812 Swr1 complex 33.33% (1/3) 10.87 0.000534 0.016156
GO:0030120 vesicle coat 33.33% (1/3) 7.96 0.004023 0.016787
GO:0035267 NuA4 histone acetyltransferase complex 33.33% (1/3) 10.17 0.000868 0.017513
GO:0043189 H4/H2A histone acetyltransferase complex 33.33% (1/3) 10.17 0.000868 0.017513
GO:0043486 obsolete histone exchange 33.33% (1/3) 11.14 0.000444 0.017918
GO:1902562 H4 histone acetyltransferase complex 33.33% (1/3) 9.88 0.001058 0.018288
GO:0045934 negative regulation of nucleobase-containing compound metabolic process 33.33% (1/3) 7.67 0.004899 0.018526
GO:0018205 peptidyl-lysine modification 33.33% (1/3) 7.75 0.004626 0.018657
GO:0097346 INO80-type complex 33.33% (1/3) 9.66 0.001238 0.018718
GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport 33.33% (1/3) 7.59 0.005168 0.01895
GO:0030117 membrane coat 33.33% (1/3) 7.68 0.00487 0.019007
GO:0016570 histone modification 33.33% (1/3) 7.38 0.005999 0.021348
GO:0032991 protein-containing complex 66.67% (2/3) 3.85 0.006232 0.021546
GO:0003712 transcription coregulator activity 33.33% (1/3) 7.09 0.007311 0.024572
GO:0051172 negative regulation of nitrogen compound metabolic process 33.33% (1/3) 6.96 0.008026 0.026247
GO:0006338 chromatin remodeling 33.33% (1/3) 6.87 0.008532 0.027169
GO:0006325 chromatin organization 33.33% (1/3) 6.74 0.009297 0.028843
GO:0048193 Golgi vesicle transport 33.33% (1/3) 6.7 0.00956 0.028917
GO:0071824 protein-DNA complex organization 33.33% (1/3) 6.42 0.011641 0.034356
GO:0018193 peptidyl-amino acid modification 33.33% (1/3) 6.13 0.014185 0.040867
GO:0009890 negative regulation of biosynthetic process 33.33% (1/3) 5.93 0.01631 0.042903
GO:0031327 negative regulation of cellular biosynthetic process 33.33% (1/3) 5.94 0.016241 0.04367
GO:0006886 intracellular protein transport 33.33% (1/3) 5.96 0.016004 0.044011
GO:0010558 negative regulation of macromolecule biosynthetic process 33.33% (1/3) 5.98 0.015787 0.044423
GO:0009892 negative regulation of metabolic process 33.33% (1/3) 5.77 0.01817 0.04487
GO:0031324 negative regulation of cellular metabolic process 33.33% (1/3) 5.78 0.018072 0.045556
GO:0010605 negative regulation of macromolecule metabolic process 33.33% (1/3) 5.8 0.017786 0.045789
GO:0015031 protein transport 33.33% (1/3) 5.62 0.020147 0.047799
GO:0006357 regulation of transcription by RNA polymerase II 33.33% (1/3) 5.65 0.019758 0.047813
GO:0098796 membrane protein complex 33.33% (1/3) 5.58 0.020821 0.04845
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (3) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms