Coexpression cluster: Cluster_807 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016272 prefoldin complex 5.08% (3/59) 9.41 0.0 4e-06
GO:0007021 tubulin complex assembly 5.08% (3/59) 8.49 0.0 1.3e-05
GO:0005844 polysome 5.08% (3/59) 8.04 0.0 2.2e-05
GO:1902680 positive regulation of RNA biosynthetic process 8.47% (5/59) 4.76 1e-06 7.8e-05
GO:0045893 positive regulation of DNA-templated transcription 8.47% (5/59) 4.76 1e-06 7.8e-05
GO:0004032 alditol:NADP+ 1-oxidoreductase activity 5.08% (3/59) 7.03 2e-06 9.2e-05
GO:0008106 alcohol dehydrogenase (NADP+) activity 5.08% (3/59) 6.95 2e-06 9.3e-05
GO:0031328 positive regulation of cellular biosynthetic process 8.47% (5/59) 4.46 4e-06 9.5e-05
GO:0009891 positive regulation of biosynthetic process 8.47% (5/59) 4.46 4e-06 9.5e-05
GO:0010557 positive regulation of macromolecule biosynthetic process 8.47% (5/59) 4.46 4e-06 9.5e-05
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 8.47% (5/59) 4.42 4e-06 9.9e-05
GO:0051254 positive regulation of RNA metabolic process 8.47% (5/59) 4.5 3e-06 0.000114
GO:0004590 orotidine-5'-phosphate decarboxylase activity 3.39% (2/59) 8.85 9e-06 0.000133
GO:0009174 pyrimidine ribonucleoside monophosphate biosynthetic process 3.39% (2/59) 8.85 9e-06 0.000133
GO:0006222 UMP biosynthetic process 3.39% (2/59) 8.85 9e-06 0.000133
GO:0046049 UMP metabolic process 3.39% (2/59) 8.85 9e-06 0.000133
GO:0009173 pyrimidine ribonucleoside monophosphate metabolic process 3.39% (2/59) 8.85 9e-06 0.000133
GO:0004033 aldo-keto reductase (NADP) activity 5.08% (3/59) 6.21 1e-05 0.000137
GO:0031325 positive regulation of cellular metabolic process 8.47% (5/59) 4.15 1e-05 0.00014
GO:1990837 sequence-specific double-stranded DNA binding 8.47% (5/59) 4.11 1.2e-05 0.000149
GO:0004588 orotate phosphoribosyltransferase activity 3.39% (2/59) 8.89 9e-06 0.000169
GO:0000976 transcription cis-regulatory region binding 8.47% (5/59) 4.21 8e-06 0.000171
GO:0001067 transcription regulatory region nucleic acid binding 8.47% (5/59) 4.21 8e-06 0.000171
GO:0009130 pyrimidine nucleoside monophosphate biosynthetic process 3.39% (2/59) 8.25 2.1e-05 0.000214
GO:0009129 pyrimidine nucleoside monophosphate metabolic process 3.39% (2/59) 8.25 2.1e-05 0.000214
GO:0048522 positive regulation of cellular process 8.47% (5/59) 3.98 1.8e-05 0.00022
GO:0009893 positive regulation of metabolic process 8.47% (5/59) 3.93 2e-05 0.000225
GO:0051173 positive regulation of nitrogen compound metabolic process 8.47% (5/59) 3.95 1.9e-05 0.000227
GO:0010604 positive regulation of macromolecule metabolic process 8.47% (5/59) 3.93 2e-05 0.000233
GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process 3.39% (2/59) 7.97 3.1e-05 0.000302
GO:0048518 positive regulation of biological process 8.47% (5/59) 3.72 4.2e-05 0.000401
GO:0003690 double-stranded DNA binding 8.47% (5/59) 3.53 7.7e-05 0.000714
GO:0004144 diacylglycerol O-acyltransferase activity 3.39% (2/59) 7.22 8.8e-05 0.000788
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 6.78% (4/59) 4.01 0.00012 0.001047
GO:0016411 acylglycerol O-acyltransferase activity 3.39% (2/59) 6.82 0.000151 0.001281
GO:0046463 acylglycerol biosynthetic process 3.39% (2/59) 6.69 0.000181 0.001376
GO:0019432 triglyceride biosynthetic process 3.39% (2/59) 6.69 0.000181 0.001376
GO:0046460 neutral lipid biosynthetic process 3.39% (2/59) 6.69 0.000181 0.001376
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors 6.78% (4/59) 3.87 0.000171 0.001407
GO:0016830 carbon-carbon lyase activity 5.08% (3/59) 4.62 0.000263 0.001954
GO:0043565 sequence-specific DNA binding 8.47% (5/59) 3.07 0.000333 0.002415
GO:0006638 neutral lipid metabolic process 3.39% (2/59) 6.18 0.000366 0.002472
GO:0006639 acylglycerol metabolic process 3.39% (2/59) 6.18 0.000366 0.002472
GO:0006641 triglyceride metabolic process 3.39% (2/59) 6.19 0.000361 0.002554
GO:0019856 pyrimidine nucleobase biosynthetic process 3.39% (2/59) 6.1 0.000406 0.00268
GO:0044205 'de novo' UMP biosynthetic process 1.69% (1/59) 10.99 0.000491 0.003169
GO:0006206 pyrimidine nucleobase metabolic process 3.39% (2/59) 5.91 0.000531 0.003358
GO:0009161 ribonucleoside monophosphate metabolic process 3.39% (2/59) 5.85 0.000579 0.00351
GO:0009156 ribonucleoside monophosphate biosynthetic process 3.39% (2/59) 5.85 0.000576 0.003563
GO:0009123 nucleoside monophosphate metabolic process 3.39% (2/59) 5.76 0.000656 0.003676
GO:0009218 pyrimidine ribonucleotide metabolic process 3.39% (2/59) 5.76 0.000652 0.003727
GO:0009124 nucleoside monophosphate biosynthetic process 3.39% (2/59) 5.76 0.000652 0.003727
GO:0046112 nucleobase biosynthetic process 3.39% (2/59) 5.72 0.000691 0.003799
GO:0009220 pyrimidine ribonucleotide biosynthetic process 3.39% (2/59) 5.76 0.000649 0.003855
GO:0006457 protein folding 5.08% (3/59) 4.1 0.000752 0.004063
GO:0006220 pyrimidine nucleotide metabolic process 3.39% (2/59) 5.51 0.000914 0.004764
GO:0006221 pyrimidine nucleotide biosynthetic process 3.39% (2/59) 5.52 0.00091 0.004828
GO:0016763 pentosyltransferase activity 3.39% (2/59) 5.45 0.000997 0.004935
GO:0000213 tRNA-intron endonuclease activity 1.69% (1/59) 9.99 0.000981 0.00494
GO:0016892 RNA endonuclease activity, producing 3'-phosphomonoesters 1.69% (1/59) 9.99 0.000981 0.00494
GO:0009112 nucleobase metabolic process 3.39% (2/59) 5.35 0.001137 0.005534
GO:0003700 DNA-binding transcription factor activity 8.47% (5/59) 2.66 0.001196 0.005727
GO:0015631 tubulin binding 5.08% (3/59) 3.84 0.001258 0.005932
GO:0072528 pyrimidine-containing compound biosynthetic process 3.39% (2/59) 5.14 0.001513 0.007023
GO:0007017 microtubule-based process 5.08% (3/59) 3.7 0.001663 0.007599
GO:0072527 pyrimidine-containing compound metabolic process 3.39% (2/59) 5.02 0.001788 0.008045
GO:0000379 tRNA-type intron splice site recognition and cleavage 1.69% (1/59) 8.92 0.00206 0.008997
GO:0000214 tRNA-intron endonuclease complex 1.69% (1/59) 8.92 0.00206 0.008997
GO:0009259 ribonucleotide metabolic process 5.08% (3/59) 3.55 0.002224 0.009572
GO:0019693 ribose phosphate metabolic process 5.08% (3/59) 3.49 0.002495 0.010587
GO:0140110 transcription regulator activity 8.47% (5/59) 2.4 0.002564 0.010724
GO:0016831 carboxy-lyase activity 3.39% (2/59) 4.71 0.002727 0.01125
GO:0009941 chloroplast envelope 3.39% (2/59) 4.58 0.003234 0.012979
GO:0009526 plastid envelope 3.39% (2/59) 4.58 0.003234 0.012979
GO:0004373 glycogen (starch) synthase activity 1.69% (1/59) 8.14 0.003529 0.013973
GO:0016829 lyase activity 5.08% (3/59) 3.27 0.003802 0.014858
GO:0065003 protein-containing complex assembly 5.08% (3/59) 3.23 0.0041 0.015814
GO:0031967 organelle envelope 3.39% (2/59) 4.23 0.005214 0.019119
GO:0031975 envelope 3.39% (2/59) 4.23 0.005214 0.019119
GO:0009117 nucleotide metabolic process 5.08% (3/59) 3.12 0.005057 0.019256
GO:0008092 cytoskeletal protein binding 5.08% (3/59) 3.09 0.005398 0.019552
GO:0006753 nucleoside phosphate metabolic process 5.08% (3/59) 3.11 0.005202 0.019555
GO:0016746 acyltransferase activity 6.78% (4/59) 2.49 0.005756 0.020597
GO:0009260 ribonucleotide biosynthetic process 3.39% (2/59) 4.04 0.006713 0.023734
GO:1901362 organic cyclic compound biosynthetic process 6.78% (4/59) 2.4 0.007018 0.024523
GO:0046390 ribose phosphate biosynthetic process 3.39% (2/59) 3.99 0.007179 0.024791
GO:0055086 nucleobase-containing small molecule metabolic process 5.08% (3/59) 2.9 0.007774 0.02654
GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation 1.69% (1/59) 6.9 0.008312 0.027127
GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation 1.69% (1/59) 6.9 0.008312 0.027127
GO:0004549 tRNA-specific ribonuclease activity 1.69% (1/59) 6.9 0.008312 0.027127
GO:0005789 endoplasmic reticulum membrane 3.39% (2/59) 3.89 0.008187 0.027633
GO:0004332 fructose-bisphosphate aldolase activity 1.69% (1/59) 6.85 0.008604 0.027775
GO:0045017 glycerolipid biosynthetic process 3.39% (2/59) 3.84 0.008803 0.028112
GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters 1.69% (1/59) 6.74 0.009285 0.028726
GO:1902555 endoribonuclease complex 1.69% (1/59) 6.74 0.009285 0.028726
GO:0008374 O-acyltransferase activity 3.39% (2/59) 3.8 0.00928 0.029322
GO:0008138 protein tyrosine/serine/threonine phosphatase activity 1.69% (1/59) 6.64 0.009966 0.030514
GO:0061630 ubiquitin protein ligase activity 3.39% (2/59) 3.69 0.010652 0.032283
GO:0061659 ubiquitin-like protein ligase activity 3.39% (2/59) 3.63 0.011556 0.034667
GO:1901293 nucleoside phosphate biosynthetic process 3.39% (2/59) 3.59 0.012258 0.035006
GO:0009165 nucleotide biosynthetic process 3.39% (2/59) 3.59 0.012258 0.035006
GO:0006355 regulation of DNA-templated transcription 8.47% (5/59) 1.86 0.012242 0.035646
GO:2001141 regulation of RNA biosynthetic process 8.47% (5/59) 1.86 0.012242 0.035646
GO:1901576 organic substance biosynthetic process 10.17% (6/59) 1.63 0.012646 0.03577
GO:0022607 cellular component assembly 5.08% (3/59) 2.66 0.012106 0.035956
GO:0006384 transcription initiation at RNA polymerase III promoter 1.69% (1/59) 6.27 0.012878 0.036083
GO:0008610 lipid biosynthetic process 5.08% (3/59) 2.59 0.013808 0.038326
GO:1990904 ribonucleoprotein complex 5.08% (3/59) 2.57 0.014406 0.039253
GO:0034654 nucleobase-containing compound biosynthetic process 5.08% (3/59) 2.57 0.014288 0.039293
GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity 1.69% (1/59) 6.06 0.014912 0.039544
GO:1905348 endonuclease complex 1.69% (1/59) 6.08 0.014719 0.03974
GO:1901135 carbohydrate derivative metabolic process 5.08% (3/59) 2.54 0.015156 0.039834
GO:0051252 regulation of RNA metabolic process 8.47% (5/59) 1.79 0.014909 0.039891
GO:0009058 biosynthetic process 10.17% (6/59) 1.56 0.015959 0.041577
GO:0016832 aldehyde-lyase activity 1.69% (1/59) 5.92 0.016362 0.041893
GO:0043933 protein-containing complex organization 5.08% (3/59) 2.5 0.01636 0.042252
GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 1.69% (1/59) 5.86 0.017038 0.043251
GO:0019219 regulation of nucleobase-containing compound metabolic process 8.47% (5/59) 1.73 0.017384 0.043755
GO:0016229 steroid dehydrogenase activity 1.69% (1/59) 5.81 0.017617 0.043969
GO:0046486 glycerolipid metabolic process 3.39% (2/59) 3.28 0.018372 0.045472
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (59) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms