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GO:0019632: shikimate metabolic process (Biological process)

"The chemical reactions and pathways involving shikimate, (3R,4S,5R)--3,4,5-trihydroxycyclohex-1-ene-1-carboxylate, the anion of shikimic acid. It is an important intermediate in the biosynthesis of aromatic amino acids." [GOC:sm, ISBN:0198547684]


There are 1329 sequences with this label.

Enriched clusters
Name Species % in cluster p-value corrected p-value action
Cluster_502 Sugarcane pan-transcriptome v1 2.99 % 2.1e-05 0.001888
Cluster_8051 Sugarcane pan-transcriptome v1 50.0 % 0.000196 0.002094
Cluster_1413 Sugarcane pan-transcriptome v1 2.56 % 0.003822 0.037818
Cluster_162 Sugarcane pan-transcriptome v1 2.26 % 0.0 3e-06
Cluster_328 Sugarcane pan-transcriptome v1 2.1 % 0.0 6.4e-05
Cluster_711 Sugarcane pan-transcriptome v1 1.77 % 6e-05 0.0008
Cluster_53 Setaria viridis 1.22 % 0.006404 0.047914
Cluster_193 Oryza sativa 0.65 % 0.00365 0.035478
Cluster_198 Oryza sativa 0.67 % 0.003555 0.029709
Cluster_134 Setaria italica 1.35 % 0.006406 0.047761
Cluster_69 Sorghum bicolor 0.54 % 0.010812 0.031919
Cluster_3277 Sugarcane pan-transcriptome v1 25.0 % 0.000393 0.010471
Cluster_7114 Sugarcane pan-transcriptome v1 20.0 % 0.000491 0.016524
Cluster_5940 Sugarcane pan-transcriptome v1 50.0 % 0.000196 0.002749
Cluster_546 Sugarcane pan-transcriptome v1 2.63 % 2.7e-05 0.004099
Cluster_6920 Sugarcane pan-transcriptome v1 50.0 % 0.000196 0.004058
Cluster_350 Sugarcane pan-transcriptome v1 2.22 % 3.8e-05 0.006661
Cluster_16 Zea mays 0.67 % 0.007581 0.024201
Cluster_127 Zea mays 0.49 % 0.010404 0.028427
Sequences (1329) (download table)

Info: GO-associations disabled for items with more than 300 associated sequences !
InterPro Domains

Family Terms