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GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (Biological process)

"The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins." [GOC:krc, GOC:ma, PMID:10025395]


There are 6311 sequences with this label.

Enriched clusters
Name Species % in cluster p-value corrected p-value action
Cluster_405 Sugarcane pan-transcriptome v1 2.08 % 0.000958 0.007979
Cluster_592 Sugarcane pan-transcriptome v1 2.94 % 1e-06 1.3e-05
Cluster_7896 Sugarcane pan-transcriptome v1 25.0 % 0.001862 0.027405
Cluster_508 Sugarcane pan-transcriptome v1 2.67 % 0.000587 0.004063
Cluster_169 Sugarcane pan-transcriptome v1 1.75 % 0.001346 0.021754
Cluster_878 Sugarcane pan-transcriptome v1 3.12 % 1.4e-05 0.000275
Cluster_6890 Sugarcane pan-transcriptome v1 100.0 % 0.0 4e-06
Cluster_11581 Sugarcane pan-transcriptome v1 50.0 % 0.000932 0.011025
Cluster_11231 Sugarcane pan-transcriptome v1 50.0 % 0.000932 0.019255
Cluster_732 Sugarcane pan-transcriptome v1 3.95 % 7e-06 0.000219
Cluster_591 Sugarcane pan-transcriptome v1 4.88 % 0.0 8e-06
Cluster_1633 Sugarcane pan-transcriptome v1 50.0 % 0.000932 0.019192
Cluster_562 Sugarcane pan-transcriptome v1 2.04 % 0.000998 0.006958
Cluster_729 Sugarcane pan-transcriptome v1 2.17 % 4.1e-05 0.000344
Cluster_421 Sugarcane pan-transcriptome v1 3.49 % 1e-05 0.00013
Cluster_11025 Sugarcane pan-transcriptome v1 100.0 % 0.0 4e-06
Cluster_158 Setaria viridis 2.38 % 2e-06 5.2e-05
Cluster_205 Setaria viridis 2.7 % 0.000102 0.015733
Cluster_87 Setaria viridis 1.56 % 0.01328 0.048859
Cluster_65 Brachypodium distachyon 1.76 % 8e-06 9.8e-05
Cluster_178 Oryza sativa 0.93 % 0.000703 0.005184
Cluster_83 Oryza sativa 1.39 % 0.013573 0.042473
Cluster_129 Oryza sativa 1.38 % 7e-06 0.000205
Cluster_67 Oryza sativa 1.06 % 0.000549 0.008012
Cluster_81 Setaria italica 0.92 % 0.00108 0.027781
Cluster_196 Sorghum bicolor 1.75 % 0.013285 0.041798
Cluster_2624 Sugarcane pan-transcriptome v1 33.33 % 0.001397 0.017325
Cluster_3123 Sugarcane pan-transcriptome v1 50.0 % 0.000932 0.00911
Cluster_4017 Sugarcane pan-transcriptome v1 50.0 % 0.000932 0.030435
Cluster_2071 Sugarcane pan-transcriptome v1 2.15 % 0.0009 0.023586
Cluster_6560 Sugarcane pan-transcriptome v1 25.0 % 0.001862 0.042092
Cluster_5613 Sugarcane pan-transcriptome v1 50.0 % 0.000932 0.015373
Cluster_4375 Sugarcane pan-transcriptome v1 50.0 % 0.000932 0.04472
Cluster_5804 Sugarcane pan-transcriptome v1 50.0 % 0.000932 0.016211
Cluster_3074 Sugarcane pan-transcriptome v1 25.0 % 0.001862 0.014589
Cluster_3351 Sugarcane pan-transcriptome v1 33.33 % 0.001397 0.030738
Cluster_8133 Sugarcane pan-transcriptome v1 50.0 % 0.000932 0.012484
Cluster_3112 Sugarcane pan-transcriptome v1 3.49 % 1e-05 0.002448
Cluster_8553 Sugarcane pan-transcriptome v1 33.33 % 0.001397 0.041916
Cluster_9816 Sugarcane pan-transcriptome v1 50.0 % 0.000932 0.011846
Cluster_8475 Sugarcane pan-transcriptome v1 50.0 % 0.000932 0.011553
Cluster_8250 Sugarcane pan-transcriptome v1 33.33 % 0.001397 0.028875
Cluster_228 Zea mays 2.04 % 0.018451 0.048887
Cluster_81 Zea mays 1.83 % 3.1e-05 0.000396
Cluster_28 Zea mays 1.75 % 0.000846 0.048221
Cluster_210 Zea mays 1.65 % 0.000952 0.035513
Cluster_793 Zea mays 100.0 % 0.0 6e-06
Cluster_299 Zea mays 2.9 % 0.0 5.7e-05
Cluster_141 Zea mays 1.12 % 0.002063 0.019316
Sequences (6311) (download table)

Info: GO-associations disabled for items with more than 300 associated sequences !
InterPro and Family associations disabled for items with more than 5000 associated sequences !