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GO:0071013: catalytic step 2 spliceosome (Cellular component)

"A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs." [GOC:ab, GOC:krc, GOC:mah, ISBN:0879695897, ISBN:0879697393, PMID:18322460, PMID:19239890]


There are 16687 sequences with this label.

Enriched clusters
Name Species % in cluster p-value corrected p-value action
Cluster_805 Sugarcane pan-transcriptome v1 1.48 % 0.000813 0.002952
Cluster_822 Sugarcane pan-transcriptome v1 3.57 % 6.1e-05 0.000874
Cluster_382 Sugarcane pan-transcriptome v1 1.55 % 0.005909 0.024244
Cluster_1501 Sugarcane pan-transcriptome v1 50.0 % 0.001757 0.012295
Cluster_8242 Sugarcane pan-transcriptome v1 50.0 % 0.001757 0.022835
Cluster_8018 Sugarcane pan-transcriptome v1 42.86 % 0.0 0.0
Cluster_317 Sugarcane pan-transcriptome v1 1.01 % 0.013543 0.042047
Cluster_534 Sugarcane pan-transcriptome v1 3.28 % 0.001362 0.006692
Cluster_414 Sugarcane pan-transcriptome v1 2.27 % 0.000232 0.003505
Cluster_11466 Sugarcane pan-transcriptome v1 50.0 % 0.001757 0.014554
Cluster_8013 Sugarcane pan-transcriptome v1 25.0 % 0.00351 0.016296
Cluster_6561 Sugarcane pan-transcriptome v1 33.33 % 0.002634 0.040162
Cluster_847 Sugarcane pan-transcriptome v1 2.78 % 0.000129 0.000533
Cluster_10549 Sugarcane pan-transcriptome v1 33.33 % 0.002634 0.023702
Cluster_693 Sugarcane pan-transcriptome v1 3.12 % 6e-06 4.3e-05
Cluster_483 Sugarcane pan-transcriptome v1 4.55 % 0.0 1e-06
Cluster_859 Sugarcane pan-transcriptome v1 4.17 % 3.8e-05 0.000292
Cluster_2355 Sugarcane pan-transcriptome v1 75.0 % 0.0 0.0
Cluster_1965 Sugarcane pan-transcriptome v1 14.29 % 0.006134 0.049074
Cluster_2932 Sugarcane pan-transcriptome v1 50.0 % 0.001757 0.015589
Cluster_76 Sugarcane pan-transcriptome v1 1.66 % 6.9e-05 0.000662
Cluster_6197 Sugarcane pan-transcriptome v1 100.0 % 1e-06 2e-06
Cluster_234 Sugarcane pan-transcriptome v1 2.27 % 0.002806 0.027723
Cluster_563 Sugarcane pan-transcriptome v1 1.57 % 0.005733 0.018082
Cluster_604 Sugarcane pan-transcriptome v1 1.54 % 0.005998 0.018027
Cluster_522 Sugarcane pan-transcriptome v1 4.2 % 0.0 2e-06
Cluster_553 Sugarcane pan-transcriptome v1 1.91 % 3.9e-05 0.000638
Cluster_569 Sugarcane pan-transcriptome v1 1.36 % 0.007601 0.038607
Cluster_456 Sugarcane pan-transcriptome v1 1.83 % 0.004262 0.014659
Cluster_10781 Sugarcane pan-transcriptome v1 100.0 % 1e-06 1e-05
Cluster_12050 Sugarcane pan-transcriptome v1 50.0 % 0.001757 0.00276
Cluster_146 Sugarcane pan-transcriptome v1 1.35 % 0.007701 0.026836
Cluster_309 Sugarcane pan-transcriptome v1 1.71 % 0.004891 0.012739
Cluster_717 Sugarcane pan-transcriptome v1 1.0 % 0.002476 0.030105
Cluster_668 Sugarcane pan-transcriptome v1 2.56 % 0.000163 0.00071
Cluster_8830 Sugarcane pan-transcriptome v1 50.0 % 0.001757 0.00803
Cluster_784 Sugarcane pan-transcriptome v1 3.9 % 4.7e-05 0.000373
Cluster_895 Sugarcane pan-transcriptome v1 1.48 % 0.006451 0.038708
Cluster_803 Sugarcane pan-transcriptome v1 4.08 % 2e-06 0.000186
Cluster_7949 Sugarcane pan-transcriptome v1 14.29 % 0.006134 0.039873
Cluster_397 Sugarcane pan-transcriptome v1 1.94 % 0.003817 0.017404
Cluster_3121 Sugarcane pan-transcriptome v1 42.86 % 0.0 1e-06
Cluster_113 Sugarcane pan-transcriptome v1 1.39 % 0.007306 0.024215
Cluster_27 Sugarcane pan-transcriptome v1 3.03 % 9.9e-05 0.000675
Cluster_13 Setaria viridis 0.5 % 0.005217 0.025935
Cluster_389 Oryza sativa 1.75 % 0.001351 0.020266
Cluster_228 Oryza sativa 1.45 % 0.001636 0.017201
Cluster_214 Setaria italica 0.88 % 0.003296 0.032892
Cluster_185 Sorghum bicolor 0.51 % 0.005802 0.029792
Cluster_161 Sorghum bicolor 0.98 % 0.002989 0.047689
Cluster_883 Sugarcane pan-transcriptome v1 2.3 % 0.002743 0.012359
Cluster_1975 Sugarcane pan-transcriptome v1 3.53 % 6.3e-05 0.000351
Cluster_7278 Sugarcane pan-transcriptome v1 50.0 % 0.001757 0.015808
Cluster_6255 Sugarcane pan-transcriptome v1 50.0 % 0.001757 0.041278
Cluster_2129 Sugarcane pan-transcriptome v1 4.92 % 2.3e-05 0.001748
Cluster_1386 Sugarcane pan-transcriptome v1 2.67 % 0.002049 0.013232
Cluster_2247 Sugarcane pan-transcriptome v1 3.3 % 7.7e-05 0.000615
Cluster_4667 Sugarcane pan-transcriptome v1 50.0 % 0.001757 0.008051
Cluster_4940 Sugarcane pan-transcriptome v1 50.0 % 0.001757 0.003903
Cluster_7130 Sugarcane pan-transcriptome v1 50.0 % 0.001757 0.011417
Cluster_2360 Sugarcane pan-transcriptome v1 3.17 % 0.001452 0.02122
Cluster_1233 Sugarcane pan-transcriptome v1 1.42 % 0.000909 0.005214
Cluster_5374 Sugarcane pan-transcriptome v1 50.0 % 0.001757 0.028982
Cluster_2344 Sugarcane pan-transcriptome v1 2.7 % 0.001996 0.006374
Cluster_4104 Sugarcane pan-transcriptome v1 50.0 % 0.001757 0.011292
Cluster_5415 Sugarcane pan-transcriptome v1 50.0 % 0.001757 0.012295
Cluster_2296 Sugarcane pan-transcriptome v1 1.84 % 0.00043 0.005036
Cluster_5673 Sugarcane pan-transcriptome v1 33.33 % 0.002634 0.025678
Cluster_3403 Sugarcane pan-transcriptome v1 33.33 % 0.002634 0.018196
Cluster_9122 Sugarcane pan-transcriptome v1 50.0 % 0.001757 0.015808
Cluster_2084 Sugarcane pan-transcriptome v1 2.53 % 0.00227 0.015034
Cluster_7899 Sugarcane pan-transcriptome v1 50.0 % 0.001757 0.005732
Cluster_141 Sugarcane pan-transcriptome v1 1.86 % 0.000415 0.002494
Cluster_4701 Sugarcane pan-transcriptome v1 5.8 % 0.0 0.000195
Cluster_8973 Sugarcane pan-transcriptome v1 50.0 % 0.001757 0.022249
Cluster_2096 Sugarcane pan-transcriptome v1 2.08 % 0.0003 0.010765
Cluster_7347 Sugarcane pan-transcriptome v1 50.0 % 0.001757 0.022835
Cluster_1255 Sugarcane pan-transcriptome v1 2.44 % 0.000189 0.000921
Cluster_4125 Sugarcane pan-transcriptome v1 3.39 % 0.001275 0.010349
Cluster_6797 Sugarcane pan-transcriptome v1 50.0 % 0.001757 0.0202
Cluster_6052 Sugarcane pan-transcriptome v1 50.0 % 0.001757 0.019907
Cluster_1939 Sugarcane pan-transcriptome v1 1.55 % 0.005909 0.023486
Cluster_2125 Sugarcane pan-transcriptome v1 2.47 % 0.002384 0.024973
Cluster_250 Zea mays 0.44 % 0.011562 0.041932
Cluster_239 Zea mays 0.65 % 0.007833 0.028845
Cluster_232 Zea mays 1.54 % 0.003289 0.038721
Sequences (16687) (download table)

Info: GO-associations disabled for items with more than 300 associated sequences !
InterPro and Family associations disabled for items with more than 5000 associated sequences !