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GO:0006285: base-excision repair, AP site formation (Biological process)

"The formation of an AP site, a deoxyribose sugar with a missing base, by DNA glycosylase which recognizes an altered base in DNA and catalyzes its hydrolytic removal. This sugar phosphate is the substrate recognized by the AP endonuclease, which cuts the DNA phosphodiester backbone at the 5' side of the altered site to leave a gap which is subsequently repaired." [ISBN:0815316194]


There are 1214 sequences with this label.

Enriched clusters
Name Species % in cluster p-value corrected p-value action
Cluster_3798 Sugarcane pan-transcriptome v1 25.0 % 0.000339 0.00577
Cluster_837 Sugarcane pan-transcriptome v1 1.35 % 0.006261 0.036908
Cluster_4907 Sugarcane pan-transcriptome v1 33.33 % 0.000255 0.006534
Cluster_4934 Sugarcane pan-transcriptome v1 50.0 % 0.00017 0.002603
Cluster_889 Sugarcane pan-transcriptome v1 2.04 % 3.3e-05 0.000453
Cluster_430 Setaria viridis 50.0 % 5.2e-05 0.003339
Cluster_241 Oryza sativa 0.59 % 0.004006 0.024233
Cluster_186 Oryza sativa 1.33 % 0.001778 0.032477
Cluster_255 Setaria italica 1.49 % 0.001937 0.033211
Cluster_186 Sorghum bicolor 1.75 % 0.00167 0.034809
Cluster_1620 Sugarcane pan-transcriptome v1 1.64 % 0.005164 0.023026
Cluster_7994 Sugarcane pan-transcriptome v1 50.0 % 0.00017 0.003055
Cluster_6678 Sugarcane pan-transcriptome v1 16.67 % 0.000509 0.010012
Cluster_3074 Sugarcane pan-transcriptome v1 25.0 % 0.000339 0.010636
Cluster_8291 Sugarcane pan-transcriptome v1 33.33 % 0.000255 0.004646
Cluster_2115 Sugarcane pan-transcriptome v1 0.98 % 0.00862 0.046678
Cluster_3566 Sugarcane pan-transcriptome v1 1.08 % 0.007863 0.040112
Cluster_519 Sugarcane pan-transcriptome v1 0.78 % 0.010806 0.046325
Cluster_4518 Sugarcane pan-transcriptome v1 1.15 % 0.007357 0.045902
Cluster_9776 Sugarcane pan-transcriptome v1 50.0 % 0.00017 0.002659
Cluster_2830 Sugarcane pan-transcriptome v1 1.23 % 0.006851 0.022779
Cluster_90 Zea mays 0.47 % 0.005393 0.040191
Sequences (1214) (download table)

Info: GO-associations disabled for items with more than 300 associated sequences !
InterPro Domains

Family Terms